These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2347#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 640 fasta sequence [CCGATCCCTCGATGCGGGGGCGCGGCGGCGACATGCGCAACCGCATTATGGGGGGCGACGTCATGTCCAAGCGTGGGGTCGATATGAAGGTTTCCAAGAAAATTCTCATCAAGCGTGCGCTTCAGGCGGCTAAGGATGGGTACGAGGATTCGGCCTCCGACAATGAGGATGAGGACGACGAGGAGGATGACGACGGTGGAGACGATGATGCGGGACCGTCCCGGGCTAAGAAGGCCAAGAAGGCTGACGCCGATGATGATGATGAGGAGGATGACGAGGAAAACGTCAAGCAGGAAAAGAGTGAGATGTGGGACGATGACGACGATGGAGGCGATGGAAAGTCCAAATCTTCCGCTCACAACGAGGATGAGGACGATGTCAACACCACTGGTGCTACGGTTGACGATGGTGACGATGAAAAGGATGGCTCGAAGCAGCAAACGCCGACGAAGAAATCCGCCAAGAAGGAAGATGCTAAGGATAGCAACGCGGAAGACGACCGCAAGACGGCGGACGACGGTAGCGATAAGAAGCGTTCGACAAAGATCAACACCAAGTATCGCACGTCAAACTTTATTAAGCTCACGTGCACGCACTGCAAGCTAAAGTGTGTCACTTTCAAGGAGTACCAGACGCATCT] [+] EMBL BM597645 [CCGATCCCTCGATGCGGGGGCGCGGCGGCGACATGCGCAACCGCATTATGGGGGGCGACGTCATGTCCAAGCGTGGGGTCGATATGAAGGTTTCCAAGAAAATTCTCATCAAGCGTGCGCTTCAGGCGGCTAAGGATGGGTACGAGGATTCGGCCTCCGACAATGAGGATGAGGACGACGAGGAGGATGACGACGGTGGAGACGATGATGCGGGACCGTCCCGGGCTAAGAAGGCCAAGAAGGCTGACGCCGATGATGATGATGAGGAGGATGACGAGGAAAACGTCAAGCAGGAAAAGAGTGAGATGTGGGACGATGACGACGATGGAGGCGATGGAAAGTCCAAATCTTCCGCTCACAACGAGGATGAGGACGATGTCAACACCACTGGTGCTACGGTTGACGATGGTGACGATGAAAAGGATGGCTCGAAGCAGCAAACGCCGACGAAGAAATCCGCCAAGAAGGAAGATGCTAAGGATAGCAACGCGGAAGACGACCGCAAGACGGCGGACGACGGTAGCGATAAGAAGCGTTCGACAAAGATCAACACCAAGTATCGCACGTCAAACTTTATTAAGCTCACGTGCACGCACTGCAAGCTAAAGTGTGTCACTTTCAAGGAGTACCAGACGCATCT] consensusID : consensus_2347#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 439 fasta sequence [CGCATCATGGGCGGGCACCACCGGCGAACGGATGGCATGCGGCCGATGACGATGCACAACCGGCGCTATCCCTCGATGCGGGGGCGCGGCGGCGACATGCGCAACCGCATTATGGGGGGCGACGTCATGTCCAAGCGTGGGGTCGATATGAAGATTTCCAAGAAAATTCTCATCAAGCGTGCGCTTCAGGCGTCTAAGGATGGTTACGAGGATTCGGCCTCCGACAATGAGGATGAGGACGACGAGGAGGATGATGACGGTGGCGATGATGATGCGGGACCGTCCCGTGCTAAGAAGGCCAAGAAGGCTGACGCCGATGACGATGACGACGATGGAGGCGATGGAAAGTCCAAATCTTCCGCTCACAACGAGGATGAGGACGATGCCAACACTACCGGTGCTACGGTTGACGATGGTGACGATGAAAAGGATGGCTCGA] [+] EMBL BX616035 [CGCATCATGGGCGGGCACCACCGGCGAACGGATGGCATGCGGCCGATGACGATGCACAACCGGCGCTATCCCTCGATGCGGGGGCGCGGCGGCGACATGCGCAACCGCATTATGGGGGGCGACGTCATGTCCAAGCGTGGGGTCGATATGAAGATTTCCAAGAAAATTCTCATCAAGCGTGCGCTTCAGGCGTCTAAGGATGGTTACGAGGATTCGGCCTCCGACAATGAGGATGAGGACGACGAGGAGGATGATGACGGTGGCGATGATGATGCGGGACCGTCCCGTGCTAAGAAGGCCAAGAAGGCTGACGCCGATGACGATGACGACGATGGAGGCGATGGAAAGTCCAAATCTTCCGCTCACAACGAGGATGAGGACGATGCCAACACTACCGGTGCTACGGTTGACGATGGTGACGATGAAAAGGATGGCTCGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2347#0 ------------------------------------------------------------ consensus_2347#1 CGCATCATGGGCGGGCACCACCGGCGAACGGATGGCATGCGGCCGATGACGATGCACAAC 60 consensus_2347#0 ----CCGATCCCTCGATGCGGGGGCGCGGCGGCGACATGCGCAACCGCATTATGGGGGGC 56 consensus_2347#1 CGGCGCTATCCCTCGATGCGGGGGCGCGGCGGCGACATGCGCAACCGCATTATGGGGGGC 120 * ***************************************************** consensus_2347#0 GACGTCATGTCCAAGCGTGGGGTCGATATGAAGGTTTCCAAGAAAATTCTCATCAAGCGT 116 consensus_2347#1 GACGTCATGTCCAAGCGTGGGGTCGATATGAAGATTTCCAAGAAAATTCTCATCAAGCGT 180 ********************************* ************************** consensus_2347#0 GCGCTTCAGGCGGCTAAGGATGGGTACGAGGATTCGGCCTCCGACAATGAGGATGAGGAC 176 consensus_2347#1 GCGCTTCAGGCGTCTAAGGATGGTTACGAGGATTCGGCCTCCGACAATGAGGATGAGGAC 240 ************ ********** ************************************ consensus_2347#0 GACGAGGAGGATGACGACGGTGGAGACGATGATGCGGGACCGTCCCGGGCTAAGAAGGCC 236 consensus_2347#1 GACGAGGAGGATGATGACGGTGGCGATGATGATGCGGGACCGTCCCGTGCTAAGAAGGCC 300 ************** ******** ** ******************** ************ consensus_2347#0 AAGAAGGCTGACGCCGATGATGATGATGAGGAGGATGACGAGGAAAACGTCAAGCAGGAA 296 consensus_2347#1 AAGAAGGCTGACGCCGATGA---------------------------------------- 320 ******************** consensus_2347#0 AAGAGTGAGATGTGGGACGATGACGACGATGGAGGCGATGGAAAGTCCAAATCTTCCGCT 356 consensus_2347#1 -----------------CGATGACGACGATGGAGGCGATGGAAAGTCCAAATCTTCCGCT 363 ******************************************* consensus_2347#0 CACAACGAGGATGAGGACGATGTCAACACCACTGGTGCTACGGTTGACGATGGTGACGAT 416 consensus_2347#1 CACAACGAGGATGAGGACGATGCCAACACTACCGGTGCTACGGTTGACGATGGTGACGAT 423 ********************** ****** ** *************************** consensus_2347#0 GAAAAGGATGGCTCGAAGCAGCAAACGCCGACGAAGAAATCCGCCAAGAAGGAAGATGCT 476 consensus_2347#1 GAAAAGGATGGCTCGA-------------------------------------------- 439 **************** consensus_2347#0 AAGGATAGCAACGCGGAAGACGACCGCAAGACGGCGGACGACGGTAGCGATAAGAAGCGT 536 consensus_2347#1 ------------------------------------------------------------ consensus_2347#0 TCGACAAAGATCAACACCAAGTATCGCACGTCAAACTTTATTAAGCTCACGTGCACGCAC 596 consensus_2347#1 ------------------------------------------------------------ consensus_2347#0 TGCAAGCTAAAGTGTGTCACTTTCAAGGAGTACCAGACGCATCT 640 consensus_2347#1 -------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||