These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2510#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 685 fasta sequence [CTGTGAATGCTCTTGGACACGTCTTCCGGTTGCTTTTCTTAGAACTGGAAACGTTTCGACCGTTTTTAAATCACTCTTTATCTTATCATCATCCGTACAACGATAAACAGAGCTGCACTTGAATACATGACCGACACACAAACGAAACATAGCTTTAAAGCTGCCATTCCGAAAAGTAAACAATGCGATAAAATGTTGGATTTAATCACCAACGAAGATTTAAACACTAATATTTCAATCAAGAACTCGCCTGGATCATTTGCTAGTTCTATCTCCACGCACTTCGGTTCAGATTCTGAACCAGTTACGCATGCAGACAGTTTCCGGAATAAGCGTTCTTTTTCGTTATCTCAGTTCTCCTCAGCGAGCTTGGATTGCTCACCAGTAGCAGAAGATGACGTACGTTATTTCGCCACACTACTTGAGGGCGAAGAATTGAACTCACCTCGAACACCGATTCCGTTGAGACCTCTCGACGCTTTAAACAATGGCCTCTCGGCACATGCTTTATCGCCAGAAATGATCAGCATACGCAATGTGACAAGGCTGGGAGGTGATCAATCGGAATTTAACACATTTAAATTAAACCTCTCACCAGCCGATGAATTAATAACCTCGTGGGCCGACGTAGAAATTACGGATGATGAGTCATCTGACATGGCGGAGTCAGCTGATATTTCCGACA] [+] EMBL BX625491 [CTGTGAATGCTCTTGGACACGTCTTCCGGTTGCTTTTCTTAGAACTGGAAACGTTTCGACCGTTTTTAAATCACTCTTTATCTTATCATCATCCGTACAACGATAAACAGAGCTGCACTTGAATACATGACCGACACACAAACGAAACATAGCTTTAAAGCTGCCATTCCGAAAAGTAAACAATGCGATAAAATGTTGGATTTAATCACCAACGAAGATTTAAACACTAATATTTCAATCAAGAACTCGCCTGGATCATTTGCTAGTTCTATCTCCACGCACTTCGGTTCAGATTCTGAACCAGTTACGCATGCAGACAGTTTCCGGAATAAGCGTTCTTTTTCGTTATCTCAGTTCTCCTCAGCGAGCTTGGATTGCTCACCAGTAGCAGAAGATGACGTACGTTATTTCGCCACACTACTTGAGGGCGAAGAATTGAACTCACCTCGAACACCGATTCCGTTGAGACCTCTCGACGCTTTAAACAATGGCCTCTCGGCACATGCTTTATCGCCAGAAATGATCAGCATACGCAATGTGACAAGGCTGGGAGGTGATCAATCGGAATTTAACACATTTAAATTAAACCTCTCACCAGCCGATGAATTAATAACCTCGTGGGCCGACGTAGAAATTACGGATGATGAGTCATCTGACATGGCGGAGTCAGCTGATATTTCCGACA] consensusID : consensus_2510#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 553 fasta sequence [ATNGCCCCGAGGTTGAACACAAACGAAACATAGCTTTAAAGCTGCCATTCCGAAAAGTAAACAATGCGATAAAATGTTGGATTTAATCACCAACGAAGATTTAAACACTAATATTTCAATCAAGAACTCGCCTGGATCATTTGCTAGTTCTATCTCCACGCACTTCGGTTCAGATTCTGAACCAGTTACGCATGCAGACAGTTTCCGGAATAAGCGTTCTTTTCGGTATCTCAGTTCTCCTCAGCGAGCTTGGATTGGTCACCAGTAGCANGAAGATGACGTACGTTATTTCGCCACACTACTTGAGGGCGAAGAATTGAACTCACCTCGAACACCGATTCCGTTGAGACCTCTCGACGCTTTAAACAATGGCCTCTCGGCACATGCTTTATCGCCAGAAATGATCAGCATACGCAATGTGACAAGGCTGGGAGGTGATCAATCGGAATTTAACACATTTAAATTTAAACCTCTCANCAGCGATGAATTAATAACCTCGTGGGCCGACGTAGAAATTACGGATGATGAGTCATCTGACATGGCGGAGGTGATG] [+] EMBL AL930910 [ATNGCCCCGAGGTTGAACACAAACGAAACATAGCTTTAAAGCTGCCATTCCGAAAAGTAAACAATGCGATAAAATGTTGGATTTAATCACCAACGAAGATTTAAACACTAATATTTCAATCAAGAACTCGCCTGGATCATTTGCTAGTTCTATCTCCACGCACTTCGGTTCAGATTCTGAACCAGTTACGCATGCAGACAGTTTCCGGAATAAGCGTTCTTTTCGGTATCTCAGTTCTCCTCAGCGAGCTTGGATTGGTCACCAGTAGCANGAAGATGACGTACGTTATTTCGCCACACTACTTGAGGGCGAAGAATTGAACTCACCTCGAACACCGATTCCGTTGAGACCTCTCGACGCTTTAAACAATGGCCTCTCGGCACATGCTTTATCGCCAGAAATGATCAGCATACGCAATGTGACAAGGCTGGGAGGTGATCAATCGGAATTTAACACATTTAAATTTAAACCTCTCANCAGCGATGAATTAATAACCTCGTGGGCCGACGTAGAAATTACGGATGATGAGTCATCTGACATGGCGGAGGTGATG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2510#0 CTGTGAATGCTCTTGGACACGTCTTCCGGTTGCTTTTCTTAGAACTGGAAACGTTTCGAC 60 consensus_2510#1 ------------------------------------------------------------ consensus_2510#0 CGTTTTTAAATCACTCTTTATCTTATCATCATCCGTACAACGATAAACAGAGCTGCACTT 120 consensus_2510#1 ----------------------------------------------------------AT 2 * consensus_2510#0 GAATACATGACCGACACACAAACGAAACATAGCTTTAAAGCTGCCATTCCGAAAAGTAAA 180 consensus_2510#1 NGCCCCGAGGTTGA-ACACAAACGAAACATAGCTTTAAAGCTGCCATTCCGAAAAGTAAA 61 * * ** ********************************************* consensus_2510#0 CAATGCGATAAAATGTTGGATTTAATCACCAACGAAGATTTAAACACTAATATTTCAATC 240 consensus_2510#1 CAATGCGATAAAATGTTGGATTTAATCACCAACGAAGATTTAAACACTAATATTTCAATC 121 ************************************************************ consensus_2510#0 AAGAACTCGCCTGGATCATTTGCTAGTTCTATCTCCACGCACTTCGGTTCAGATTCTGAA 300 consensus_2510#1 AAGAACTCGCCTGGATCATTTGCTAGTTCTATCTCCACGCACTTCGGTTCAGATTCTGAA 181 ************************************************************ consensus_2510#0 CCAGTTACGCATGCAGACAGTTTCCGGAATAAGCGTTCTTTTTCGTTATCTCAGTTCTCC 360 consensus_2510#1 CCAGTTACGCATGCAGACAGTTTCCGGAATAAGCGTTCTTTT-CGGTATCTCAGTTCTCC 240 ****************************************** ** ************** consensus_2510#0 TCAGCGAGCTTGGATTGCTCACCAGTAGCAG-AAGATGACGTACGTTATTTCGCCACACT 419 consensus_2510#1 TCAGCGAGCTTGGATTGGTCACCAGTAGCANGAAGATGACGTACGTTATTTCGCCACACT 300 ***************** ************ **************************** consensus_2510#0 ACTTGAGGGCGAAGAATTGAACTCACCTCGAACACCGATTCCGTTGAGACCTCTCGACGC 479 consensus_2510#1 ACTTGAGGGCGAAGAATTGAACTCACCTCGAACACCGATTCCGTTGAGACCTCTCGACGC 360 ************************************************************ consensus_2510#0 TTTAAACAATGGCCTCTCGGCACATGCTTTATCGCCAGAAATGATCAGCATACGCAATGT 539 consensus_2510#1 TTTAAACAATGGCCTCTCGGCACATGCTTTATCGCCAGAAATGATCAGCATACGCAATGT 420 ************************************************************ consensus_2510#0 GACAAGGCTGGGAGGTGATCAATCGGAATTTAACACATTTAAATT-AAACCTCTCACCAG 598 consensus_2510#1 GACAAGGCTGGGAGGTGATCAATCGGAATTTAACACATTTAAATTTAAACCTCTCANCAG 480 ********************************************* ********** *** consensus_2510#0 CCGATGAATTAATAACCTCGTGGGCCGACGTAGAAATTACGGATGATGAGTCATCTGACA 658 consensus_2510#1 C-GATGAATTAATAACCTCGTGGGCCGACGTAGAAATTACGGATGATGAGTCATCTGACA 539 * ********************************************************** consensus_2510#0 TGGCGGAGTCAGCTGATATTTCCGACA 685 consensus_2510#1 TGGCGGAGGTGATG------------- 553 ******** |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||