cluster # 2756

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Anopheles gambiae
cluster # 2756 cluster # 2756 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2756#0 length = 669 sequences # 1

consensus_2756#1 length = 668 sequences # 1

consensusID : consensus_2756#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 669
fasta sequence

                              [CCGCCCACGCGTCCGACTGTAGGCACTTTTGGGCCACTTATCTCTCGGCAGCTGTTGTTTCGGTGAATTAGTAATAGGCAGATAATAGACATTATTGTACGTTCCCGAAAAGTTGGTGATCTCGCACACGGAATGTTGACGGGCGAAACGGTACTGCTCGTCCAGATCGCTCTGGTGGTGATCGCTCTGGTACCGCTTGCAAAATGGTTCAAGAAGCGGCTCAACTTGCACGATGTGATCAACAAAATTCCCGGCCCCAAGGCGTACCCGATCATCGGAACGATGTACACCTTCGTTGGGAAGAAGTCGGAAGAAATCTTCTACATCATTGACAAACGCACCCGTGACTACCCGGAGATTCATCGCATTTGGAACGGGTTCGTGCCGGAGGTGCGCATCAACAAGGCGGAGTACGTGGAGAAGCTGCTCTCCTCCAGCCGGAACATTGAAAAGTCGATGACGTACAAATTCACCCGGGACTGGCTCGGTCAGGGTTTGTTAACGTCAAAAGATGATCGATGGTTTCAGCACCGGCGGCTCATAACGCCCACCTTTCACTTCAACATCCTGGACGGCTTCTGCGAGGTGTTTGCCGAGCATGGGGCACTGCTGGTGGAGAAGCTGGCGGCAGCCCGGGGCCGCCACCAGTGCCAGCCAGCCGATCAACGT]

[+] EMBL BM639147             [CCGCCCACGCGTCCGACTGTAGGCACTTTTGGGCCACTTATCTCTCGGCAGCTGTTGTTTCGGTGAATTAGTAATAGGCAGATAATAGACATTATTGTACGTTCCCGAAAAGTTGGTGATCTCGCACACGGAATGTTGACGGGCGAAACGGTACTGCTCGTCCAGATCGCTCTGGTGGTGATCGCTCTGGTACCGCTTGCAAAATGGTTCAAGAAGCGGCTCAACTTGCACGATGTGATCAACAAAATTCCCGGCCCCAAGGCGTACCCGATCATCGGAACGATGTACACCTTCGTTGGGAAGAAGTCGGAAGAAATCTTCTACATCATTGACAAACGCACCCGTGACTACCCGGAGATTCATCGCATTTGGAACGGGTTCGTGCCGGAGGTGCGCATCAACAAGGCGGAGTACGTGGAGAAGCTGCTCTCCTCCAGCCGGAACATTGAAAAGTCGATGACGTACAAATTCACCCGGGACTGGCTCGGTCAGGGTTTGTTAACGTCAAAAGATGATCGATGGTTTCAGCACCGGCGGCTCATAACGCCCACCTTTCACTTCAACATCCTGGACGGCTTCTGCGAGGTGTTTGCCGAGCATGGGGCACTGCTGGTGGAGAAGCTGGCGGCAGCCCGGGGCCGCCACCAGTGCCAGCCAGCCGATCAACGT]




>consensus_2756#0
CCGCCCACGCGTCCGACTGTAGGCACTTTTGGGCCACTTATCTCTCGGCAGCTGTTGTTT
CGGTGAATTAGTAATAGGCAGATAATAGACATTATTGTACGTTCCCGAAAAGTTGGTGAT
CTCGCACACGGAATGTTGACGGGCGAAACGGTACTGCTCGTCCAGATCGCTCTGGTGGTG
ATCGCTCTGGTACCGCTTGCAAAATGGTTCAAGAAGCGGCTCAACTTGCACGATGTGATC
AACAAAATTCCCGGCCCCAAGGCGTACCCGATCATCGGAACGATGTACACCTTCGTTGGG
AAGAAGTCGGAAGAAATCTTCTACATCATTGACAAACGCACCCGTGACTACCCGGAGATT
CATCGCATTTGGAACGGGTTCGTGCCGGAGGTGCGCATCAACAAGGCGGAGTACGTGGAG
AAGCTGCTCTCCTCCAGCCGGAACATTGAAAAGTCGATGACGTACAAATTCACCCGGGAC
TGGCTCGGTCAGGGTTTGTTAACGTCAAAAGATGATCGATGGTTTCAGCACCGGCGGCTC
ATAACGCCCACCTTTCACTTCAACATCCTGGACGGCTTCTGCGAGGTGTTTGCCGAGCAT
GGGGCACTGCTGGTGGAGAAGCTGGCGGCAGCCCGGGGCCGCCACCAGTGCCAGCCAGCC
GATCAACGT

consensusID : consensus_2756#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 668
fasta sequence

                              [CCGGAGCCTTGGAACTGTAGGCACTTTTGGGCCACTTATCTCTCGGCAGCTGTTGTTTCGGTGAATTAGTAATAGGCAGATAATAGACATTATTGTACGTTCCCGAAAAGTTGGTGATCTCGCACACGGAATGTTGACGGGCGAAACGGTACTGCTCGTCCAGATCGCTCTGGTGGTGATCGCTCTGGTACCGCTTGCAAAATGGTTCAAGAAGCGGCTCAACTTGCACGATGTGATCAACAAAATTCCCGGCCCCAAGGCGTACCCGATCATCGGAACGATGTACACCTTCGTTGGGAAGAAGTCGGAAGAAATCTTCTACATCATTGACAAACGCACCCGTGACTACCCGGAGATTCATCGCATTTGGAACGGGTTCGTGCCGGAGGTGCGCATCAACAAGGCGGAGTACGTGGAGAAGCTGCTCTCCTCCAGCCGGAACATTGAAAAGTCGATGACGTACAAATTCACCCGGGACTGGCTCGGTCAGGGTTTGTTAACGTCAAAAGATGATCGATGGTTTCAGCACCGGCGGCTCATAACGCCCACCTTTCACTTCAACATCCTGGACGGCTTCTGCGAGGTGTTTGCCGAGCATGGGGCACTGCTGGTGGAAGAAGCTGGCGGCAGCCCGGGCCGCCACCAGTGCCAGCCAGCCGATCAACGTG]

[+] EMBL BM648861             [CCGGAGCCTTGGAACTGTAGGCACTTTTGGGCCACTTATCTCTCGGCAGCTGTTGTTTCGGTGAATTAGTAATAGGCAGATAATAGACATTATTGTACGTTCCCGAAAAGTTGGTGATCTCGCACACGGAATGTTGACGGGCGAAACGGTACTGCTCGTCCAGATCGCTCTGGTGGTGATCGCTCTGGTACCGCTTGCAAAATGGTTCAAGAAGCGGCTCAACTTGCACGATGTGATCAACAAAATTCCCGGCCCCAAGGCGTACCCGATCATCGGAACGATGTACACCTTCGTTGGGAAGAAGTCGGAAGAAATCTTCTACATCATTGACAAACGCACCCGTGACTACCCGGAGATTCATCGCATTTGGAACGGGTTCGTGCCGGAGGTGCGCATCAACAAGGCGGAGTACGTGGAGAAGCTGCTCTCCTCCAGCCGGAACATTGAAAAGTCGATGACGTACAAATTCACCCGGGACTGGCTCGGTCAGGGTTTGTTAACGTCAAAAGATGATCGATGGTTTCAGCACCGGCGGCTCATAACGCCCACCTTTCACTTCAACATCCTGGACGGCTTCTGCGAGGTGTTTGCCGAGCATGGGGCACTGCTGGTGGAAGAAGCTGGCGGCAGCCCGGGCCGCCACCAGTGCCAGCCAGCCGATCAACGTG]




>consensus_2756#1
CCGGAGCCTTGGAACTGTAGGCACTTTTGGGCCACTTATCTCTCGGCAGCTGTTGTTTCG
GTGAATTAGTAATAGGCAGATAATAGACATTATTGTACGTTCCCGAAAAGTTGGTGATCT
CGCACACGGAATGTTGACGGGCGAAACGGTACTGCTCGTCCAGATCGCTCTGGTGGTGAT
CGCTCTGGTACCGCTTGCAAAATGGTTCAAGAAGCGGCTCAACTTGCACGATGTGATCAA
CAAAATTCCCGGCCCCAAGGCGTACCCGATCATCGGAACGATGTACACCTTCGTTGGGAA
GAAGTCGGAAGAAATCTTCTACATCATTGACAAACGCACCCGTGACTACCCGGAGATTCA
TCGCATTTGGAACGGGTTCGTGCCGGAGGTGCGCATCAACAAGGCGGAGTACGTGGAGAA
GCTGCTCTCCTCCAGCCGGAACATTGAAAAGTCGATGACGTACAAATTCACCCGGGACTG
GCTCGGTCAGGGTTTGTTAACGTCAAAAGATGATCGATGGTTTCAGCACCGGCGGCTCAT
AACGCCCACCTTTCACTTCAACATCCTGGACGGCTTCTGCGAGGTGTTTGCCGAGCATGG
GGCACTGCTGGTGGAAGAAGCTGGCGGCAGCCCGGGCCGCCACCAGTGCCAGCCAGCCGA
TCAACGTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2756#0      CCGCCCACGCGTCCGA-CTGTAGGCACTTTTGGGCCACTTATCTCTCGGCAGCTGTTGTT 59
consensus_2756#1      ---CCGGAGCCTTGGAACTGTAGGCACTTTTGGGCCACTTATCTCTCGGCAGCTGTTGTT 57
                         **   ** *  ** *******************************************

consensus_2756#0      TCGGTGAATTAGTAATAGGCAGATAATAGACATTATTGTACGTTCCCGAAAAGTTGGTGA 119
consensus_2756#1      TCGGTGAATTAGTAATAGGCAGATAATAGACATTATTGTACGTTCCCGAAAAGTTGGTGA 117
                      ************************************************************

consensus_2756#0      TCTCGCACACGGAATGTTGACGGGCGAAACGGTACTGCTCGTCCAGATCGCTCTGGTGGT 179
consensus_2756#1      TCTCGCACACGGAATGTTGACGGGCGAAACGGTACTGCTCGTCCAGATCGCTCTGGTGGT 177
                      ************************************************************

consensus_2756#0      GATCGCTCTGGTACCGCTTGCAAAATGGTTCAAGAAGCGGCTCAACTTGCACGATGTGAT 239
consensus_2756#1      GATCGCTCTGGTACCGCTTGCAAAATGGTTCAAGAAGCGGCTCAACTTGCACGATGTGAT 237
                      ************************************************************

consensus_2756#0      CAACAAAATTCCCGGCCCCAAGGCGTACCCGATCATCGGAACGATGTACACCTTCGTTGG 299
consensus_2756#1      CAACAAAATTCCCGGCCCCAAGGCGTACCCGATCATCGGAACGATGTACACCTTCGTTGG 297
                      ************************************************************

consensus_2756#0      GAAGAAGTCGGAAGAAATCTTCTACATCATTGACAAACGCACCCGTGACTACCCGGAGAT 359
consensus_2756#1      GAAGAAGTCGGAAGAAATCTTCTACATCATTGACAAACGCACCCGTGACTACCCGGAGAT 357
                      ************************************************************

consensus_2756#0      TCATCGCATTTGGAACGGGTTCGTGCCGGAGGTGCGCATCAACAAGGCGGAGTACGTGGA 419
consensus_2756#1      TCATCGCATTTGGAACGGGTTCGTGCCGGAGGTGCGCATCAACAAGGCGGAGTACGTGGA 417
                      ************************************************************

consensus_2756#0      GAAGCTGCTCTCCTCCAGCCGGAACATTGAAAAGTCGATGACGTACAAATTCACCCGGGA 479
consensus_2756#1      GAAGCTGCTCTCCTCCAGCCGGAACATTGAAAAGTCGATGACGTACAAATTCACCCGGGA 477
                      ************************************************************

consensus_2756#0      CTGGCTCGGTCAGGGTTTGTTAACGTCAAAAGATGATCGATGGTTTCAGCACCGGCGGCT 539
consensus_2756#1      CTGGCTCGGTCAGGGTTTGTTAACGTCAAAAGATGATCGATGGTTTCAGCACCGGCGGCT 537
                      ************************************************************

consensus_2756#0      CATAACGCCCACCTTTCACTTCAACATCCTGGACGGCTTCTGCGAGGTGTTTGCCGAGCA 599
consensus_2756#1      CATAACGCCCACCTTTCACTTCAACATCCTGGACGGCTTCTGCGAGGTGTTTGCCGAGCA 597
                      ************************************************************

consensus_2756#0      TGGGGCACTGCTGGTGGA-GAAGCTGGCGGCAGCCCGGGGCCGCCACCAGTGCCAGCCAG 658
consensus_2756#1      TGGGGCACTGCTGGTGGAAGAAGCTGGCGGCAGCCCGGG-CCGCCACCAGTGCCAGCCAG 656
                      ****************** ******************** ********************

consensus_2756#0      CCGATCAACGT- 669
consensus_2756#1      CCGATCAACGTG 668
                      ***********