These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_280#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 686 fasta sequence [CCGCCCACGCGTCCGCAAGGACTACTTCAGCCAGTACAACAAGAACCACAAGTACCAGAACGATTACTACGAGCAGTTCGGAAACAAGAACCAGGAGGAGTTCCAGAAGTGGTCCACCACCCGCATCGCCAAGCTGCTGAACATCGATCCCGAGGAGGCTGAGGAGCTGGAGGGTCAGTTCATGTTCCAGATCTTCAACGGAGAGCGCTTCTTCGCCTTCAACAACCAGACCATTGAGCAGTTCCCGAGCCTTGTGAAGAAGTACTTCGAGGACTTCGAGGATGGTTTCGCCTACAACATGACCAAGTTCTATCAGCAGAACGTTGTCACCATGGCCTTCCCGCTGGCCACCGGTCTGCCATTCCACTACAGCCTGAAGACCCCGACTCTGATGAAGTTCGAGTTCGAGGCCTCTGCCACCACCTACCCGAGCATTTTCAAGACCCCCACTGGATACCCCGAGAAGGAGAACGACGACTTTATCCATATGCCCCGTTGGTTCAACGGATCCGCTGATGTGAACATGGCCTACTCTCGCCTGGTTGATGCCAAGGTTGGCTTCATTACGCCCTTCGACCACCAGCGTTATGTCGCCGGTTACCAGAAGAAGTTCCAGGGATACCTGCCATTCAGCTTCGACTTTGGCTTCGACTTTGAGAACAACGACTTTGAAGTGAACGTGCAGC] [+] EMBL BM577939 [CCGCCCACGCGTCCGCAAGGACTACTTCAGCCAGTACAACAAGAACCACAAGTACCAGAACGATTACTACGAGCAGTTCGGAAACAAGAACCAGGAGGAGTTCCAGAAGTGGTCCACCACCCGCATCGCCAAGCTGCTGAACATCGATCCCGAGGAGGCTGAGGAGCTGGAGGGTCAGTTCATGTTCCAGATCTTCAACGGAGAGCGCTTCTTCGCCTTCAACAACCAGACCATTGAGCAGTTCCCGAGCCTTGTGAAGAAGTACTTCGAGGACTTCGAGGATGGTTTCGCCTACAACATGACCAAGTTCTATCAGCAGAACGTTGTCACCATGGCCTTCCCGCTGGCCACCGGTCTGCCATTCCACTACAGCCTGAAGACCCCGACTCTGATGAAGTTCGAGTTCGAGGCCTCTGCCACCACCTACCCGAGCATTTTCAAGACCCCCACTGGATACCCCGAGAAGGAGAACGACGACTTTATCCATATGCCCCGTTGGTTCAACGGATCCGCTGATGTGAACATGGCCTACTCTCGCCTGGTTGATGCCAAGGTTGGCTTCATTACGCCCTTCGACCACCAGCGTTATGTCGCCGGTTACCAGAAGAAGTTCCAGGGATACCTGCCATTCAGCTTCGACTTTGGCTTCGACTTTGAGAACAACGACTTTGAAGTGAACGTGCAGC] consensusID : consensus_280#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 135 fasta sequence [GACCCACGCGTCCGCTGCCATTCAGCTTCGACTTTGGCTTCGACTTTGAGAACAACGACTTTGAAGTGAACACCCGTGCAGCCGCTGGAGCCCAAGAAGGACGTGCTACTCTTTCCCACATGGAGCTCGTGGCCG] [+] EMBL BM599483 [GACCCACGCGTCCGCTGCCATTCAGCTTCGACTTTGGCTTCGACTTTGAGAACAACGACTTTGAAGTGAACACCCGTGCAGCCGCTGGAGCCCAAGAAGGACGTGCTACTCTTTCCCACATGGAGCTCGTGGCCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_280#0 CCGCCCACGCGTCCGCAAGGACTACTTCAGCCAGTACAACAAGAACCACAAGTACCAGAA 60 consensus_280#1 -GACCCACGCGTCCGCTGCCA----TTCAGC---TTCGACTTTGGCTTCGACTTTGAGAA 52 ************* * ****** * * ** * * * * **** consensus_280#0 CGATTACTACGAGCAGTTCGGAAACAAGAACCAGGAGGAGTTCCAGAAGTGGTCCACCAC 120 consensus_280#1 CAACGACTTTGA--AGTGAACACCCGTGCAGCCGCTGGAGCCCAAGAAG-GACGTGCTAC 109 * * *** ** *** * * * * * * **** * ***** * * ** consensus_280#0 CCGCATCGCCAAGCTGCTGAACATCGATCCCGAGGAGGCTGAGGAGCTGGAGGGTCAGTT 180 consensus_280#1 TCTTTCCCACATGGAGCTCGTGGCCG---------------------------------- 135 * * ** * *** ** consensus_280#0 CATGTTCCAGATCTTCAACGGAGAGCGCTTCTTCGCCTTCAACAACCAGACCATTGAGCA 240 consensus_280#1 ------------------------------------------------------------ consensus_280#0 GTTCCCGAGCCTTGTGAAGAAGTACTTCGAGGACTTCGAGGATGGTTTCGCCTACAACAT 300 consensus_280#1 ------------------------------------------------------------ consensus_280#0 GACCAAGTTCTATCAGCAGAACGTTGTCACCATGGCCTTCCCGCTGGCCACCGGTCTGCC 360 consensus_280#1 ------------------------------------------------------------ consensus_280#0 ATTCCACTACAGCCTGAAGACCCCGACTCTGATGAAGTTCGAGTTCGAGGCCTCTGCCAC 420 consensus_280#1 ------------------------------------------------------------ consensus_280#0 CACCTACCCGAGCATTTTCAAGACCCCCACTGGATACCCCGAGAAGGAGAACGACGACTT 480 consensus_280#1 ------------------------------------------------------------ consensus_280#0 TATCCATATGCCCCGTTGGTTCAACGGATCCGCTGATGTGAACATGGCCTACTCTCGCCT 540 consensus_280#1 ------------------------------------------------------------ consensus_280#0 GGTTGATGCCAAGGTTGGCTTCATTACGCCCTTCGACCACCAGCGTTATGTCGCCGGTTA 600 consensus_280#1 ------------------------------------------------------------ consensus_280#0 CCAGAAGAAGTTCCAGGGATACCTGCCATTCAGCTTCGACTTTGGCTTCGACTTTGAGAA 660 consensus_280#1 ------------------------------------------------------------ consensus_280#0 CAACGACTTTGAAGTGAACGTGCAGC 686 consensus_280#1 -------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||