These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2826#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 613 fasta sequence [ATGCCCCGAGGNNGAGATGAGTACAAGCCGGATCCGGTCGTGATTAAGGCGCGCACCATGCGCCTCAACCACAAACCGTTCACGTACAAGATCAGCCTGACGGCGGACAAGCCGGCCAAGGCGGCCGTGCGCGTCTTCCTCGGACCCAAGTACGACGAGTACGTGTGGACTGTACACGCTGAACGAGAACCGCGAGAACTTCTACGAGCTGGACTACTTCGTGCAGGAGCTGACGGCCGGCAAGAACGTGCTGACGCGCAGCTCGGTCAACTTCAACGGCTACGTCAAGGATCGCACCTCGTTCTACGAGCTGTACCGCAGCGTCATGGCCTGGATACACCGGGGCGGAGAAGTTCCAGCTCGACATGTCCGAGGCGCACTGCGGCTTCCCGAACCGGCTCATGCTGCCGAAGGGCAAGAAGGGCGGTATGCCGTTCCAGCTGTACGTGATCGTGTCGCCGTACAAGGCACCGCAGGTGTCCCAGTACAGCGGCTTCGATCCGGTGCTATCGTGCGGCGTCGGTTCCGGCGCGCGCTACATGGACTCGTACGCCTTCGGCTATCCGTTCGACCGTCCGATCGACGAGAAGCTGTTCTACGCTGTGCCGAACGC] [+] EMBL AL934735 [ATGCCCCGAGGNNGAGATGAGTACAAGCCGGATCCGGTCGTGATTAAGGCGCGCACCATGCGCCTCAACCACAAACCGTTCACGTACAAGATCAGCCTGACGGCGGACAAGCCGGCCAAGGCGGCCGTGCGCGTCTTCCTCGGACCCAAGTACGACGAGTACGTGTGGACTGTACACGCTGAACGAGAACCGCGAGAACTTCTACGAGCTGGACTACTTCGTGCAGGAGCTGACGGCCGGCAAGAACGTGCTGACGCGCAGCTCGGTCAACTTCAACGGCTACGTCAAGGATCGCACCTCGTTCTACGAGCTGTACCGCAGCGTCATGGCCTGGATACACCGGGGCGGAGAAGTTCCAGCTCGACATGTCCGAGGCGCACTGCGGCTTCCCGAACCGGCTCATGCTGCCGAAGGGCAAGAAGGGCGGTATGCCGTTCCAGCTGTACGTGATCGTGTCGCCGTACAAGGCACCGCAGGTGTCCCAGTACAGCGGCTTCGATCCGGTGCTATCGTGCGGCGTCGGTTCCGGCGCGCGCTACATGGACTCGTACGCCTTCGGCTATCCGTTCGACCGTCCGATCGACGAGAAGCTGTTCTACGCTGTGCCGAACGC] consensusID : consensus_2826#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 404 fasta sequence [ACCAGTTCAAGGAGCATCTGCCGGAGTACACGTACGAGGAGCTGTACTACCCGGGCGTGAAGATCGACGGCGTGGTGGTGGACAAGCTGCAGACGTACTTCGATCGCTTCGACGTGGACATCACCAACGCCATCGACATCGAGCCGGAACCGTACGTGCCGGGCAAGTACGAAGGCTTCGGCGAGATCGAGTACAAGCCGGATCCGGTCGTGATTAAGGCGCGCACCATGCGCCTCAACCACAAACCGTTCACGTACAAGATCAGCCTGACGGCGGACAAGCCGGCCAAGGCGGCCGTGCGCGTCTTCCTCGGACCCAAGTACGACGAGTACGGTGGACTGTACACGCTGAACGAGAACCGCGAGAACTTCTACGAGCTGGACTACTTCGTGCAGGAGCTGACG] [+] EMBL BX625861 [ACCAGTTCAAGGAGCATCTGCCGGAGTACACGTACGAGGAGCTGTACTACCCGGGCGTGAAGATCGACGGCGTGGTGGTGGACAAGCTGCAGACGTACTTCGATCGCTTCGACGTGGACATCACCAACGCCATCGACATCGAGCCGGAACCGTACGTGCCGGGCAAGTACGAAGGCTTCGGCGAGATCGAGTACAAGCCGGATCCGGTCGTGATTAAGGCGCGCACCATGCGCCTCAACCACAAACCGTTCACGTACAAGATCAGCCTGACGGCGGACAAGCCGGCCAAGGCGGCCGTGCGCGTCTTCCTCGGACCCAAGTACGACGAGTACGGTGGACTGTACACGCTGAACGAGAACCGCGAGAACTTCTACGAGCTGGACTACTTCGTGCAGGAGCTGACG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2826#0 ------------------------------------------------------------ consensus_2826#1 ACCAGTTCAAGGAGCATCTGCCGGAGTACACGTACGAGGAGCTGTACTACCCGGGCGTGA 60 consensus_2826#0 ------------------------------------------------------------ consensus_2826#1 AGATCGACGGCGTGGTGGTGGACAAGCTGCAGACGTACTTCGATCGCTTCGACGTGGACA 120 consensus_2826#0 --------------------------------------------ATGCCCCGAGGNN--- 13 consensus_2826#1 TCACCAACGCCATCGACATCGAGCCGGAACCGTACGTGCCGGGCAAGTACGAAGGCTTCG 180 * * * *** consensus_2826#0 --GAGAT-GAGTACAAGCCGGATCCGGTCGTGATTAAGGCGCGCACCATGCGCCTCAACC 70 consensus_2826#1 GCGAGATCGAGTACAAGCCGGATCCGGTCGTGATTAAGGCGCGCACCATGCGCCTCAACC 240 ***** **************************************************** consensus_2826#0 ACAAACCGTTCACGTACAAGATCAGCCTGACGGCGGACAAGCCGGCCAAGGCGGCCGTGC 130 consensus_2826#1 ACAAACCGTTCACGTACAAGATCAGCCTGACGGCGGACAAGCCGGCCAAGGCGGCCGTGC 300 ************************************************************ consensus_2826#0 GCGTCTTCCTCGGACCCAAGTACGACGAGTACGTGTGGACTGTACACGCTGAACGAGAAC 190 consensus_2826#1 GCGTCTTCCTCGGACCCAAGTACGACGAGTACG-GTGGACTGTACACGCTGAACGAGAAC 359 ********************************* ************************** consensus_2826#0 CGCGAGAACTTCTACGAGCTGGACTACTTCGTGCAGGAGCTGACGGCCGGCAAGAACGTG 250 consensus_2826#1 CGCGAGAACTTCTACGAGCTGGACTACTTCGTGCAGGAGCTGACG--------------- 404 ********************************************* consensus_2826#0 CTGACGCGCAGCTCGGTCAACTTCAACGGCTACGTCAAGGATCGCACCTCGTTCTACGAG 310 consensus_2826#1 ------------------------------------------------------------ consensus_2826#0 CTGTACCGCAGCGTCATGGCCTGGATACACCGGGGCGGAGAAGTTCCAGCTCGACATGTC 370 consensus_2826#1 ------------------------------------------------------------ consensus_2826#0 CGAGGCGCACTGCGGCTTCCCGAACCGGCTCATGCTGCCGAAGGGCAAGAAGGGCGGTAT 430 consensus_2826#1 ------------------------------------------------------------ consensus_2826#0 GCCGTTCCAGCTGTACGTGATCGTGTCGCCGTACAAGGCACCGCAGGTGTCCCAGTACAG 490 consensus_2826#1 ------------------------------------------------------------ consensus_2826#0 CGGCTTCGATCCGGTGCTATCGTGCGGCGTCGGTTCCGGCGCGCGCTACATGGACTCGTA 550 consensus_2826#1 ------------------------------------------------------------ consensus_2826#0 CGCCTTCGGCTATCCGTTCGACCGTCCGATCGACGAGAAGCTGTTCTACGCTGTGCCGAA 610 consensus_2826#1 ------------------------------------------------------------ consensus_2826#0 CGC 613 consensus_2826#1 --- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||