These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2976#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 636 fasta sequence [TTGTGAGTAGCTTTGGGCAATAACTATCCATGGGAATGTTAACAGATCGCAACATGTACGAAGAAGAGTACGATGAGGCTGCAGAGATGCTGGTGGTTTACGATCCCGAACCGGAGATCGATTATACCAGTTCAATCTTGCCGCAAAAGACGCCGTTGGACGAGCATAGCTACTTTTTCTCCGCAGAAAGGACCCTAGAACTGATTGCCATCGTTGAGAGTGAACCATTTCTATGGGATAAGACGCAGCTCGATTACAAGAATGTAAAAATGACTGAAAATGCCTGGCGCATGGTAGCGTCCAAGATGGAGCTTGACGTGGAGGTGTGCAAGGAGAAGTGGACCTGTCTGCGGGCCCAGTTTCGCAAGCTGAAGCGAAGAATGATACAGTCAAGCCAGAATGGAACAGGCACGGACGAGATATATCAACCATCCTGGTATGCGTACGAAGCAATGGCATTCCTAAACGAAGCAGTGGAATGTGAAGGTGATACAAATACGGTTGATGGAAACAACACCCAATACTGCACAGCAAACACGAAATTGAAGCCACCGTTAGACGACATTCCCTTTCGCGGGAAAACACCCTTGAGCTTGTTTCTATCATTGAGGGCTTGCCTGTACTGTGGAATAGAGC] [+] EMBL BX624685 [TTGTGAGTAGCTTTGGGCAATAACTATCCATGGGAATGTTAACAGATCGCAACATGTACGAAGAAGAGTACGATGAGGCTGCAGAGATGCTGGTGGTTTACGATCCCGAACCGGAGATCGATTATACCAGTTCAATCTTGCCGCAAAAGACGCCGTTGGACGAGCATAGCTACTTTTTCTCCGCAGAAAGGACCCTAGAACTGATTGCCATCGTTGAGAGTGAACCATTTCTATGGGATAAGACGCAGCTCGATTACAAGAATGTAAAAATGACTGAAAATGCCTGGCGCATGGTAGCGTCCAAGATGGAGCTTGACGTGGAGGTGTGCAAGGAGAAGTGGACCTGTCTGCGGGCCCAGTTTCGCAAGCTGAAGCGAAGAATGATACAGTCAAGCCAGAATGGAACAGGCACGGACGAGATATATCAACCATCCTGGTATGCGTACGAAGCAATGGCATTCCTAAACGAAGCAGTGGAATGTGAAGGTGATACAAATACGGTTGATGGAAACAACACCCAATACTGCACAGCAAACACGAAATTGAAGCCACCGTTAGACGACATTCCCTTTCGCGGGAAAACACCCTTGAGCTTGTTTCTATCATTGAGGGCTTGCCTGTACTGTGGAATAGAGC] consensusID : consensus_2976#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 100 fasta sequence [ATGCTGGTGGTTTACGATCCCGAACCGGAGGTCGATTCCAACAGTCCAATATTACAGCAAAAGACGCCGTTGGACGAGCATAGCTACTTTTTCTCCGCAG] [+] EMBL CNS08R8T [ATGCTGGTGGTTTACGATCCCGAACCGGAGGTCGATTCCAACAGTCCAATATTACAGCAAAAGACGCCGTTGGACGAGCATAGCTACTTTTTCTCCGCAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2976#0 TTGTGAGTAGCTTTGGGCAATAACTATCCATGGGAATGTTAACAGATCGCAACATGTACG 60 consensus_2976#1 ------------------------------------------------------------ consensus_2976#0 AAGAAGAGTACGATGAGGCTGCAGAGATGCTGGTGGTTTACGATCCCGAACCGGAGATCG 120 consensus_2976#1 --------------------------ATGCTGGTGGTTTACGATCCCGAACCGGAGGTCG 34 ****************************** *** consensus_2976#0 ATTATACCAGTTCAATCTTGCCGCAAAAGACGCCGTTGGACGAGCATAGCTACTTTTTCT 180 consensus_2976#1 ATTCCAACAGTCCAATATTACAGCAAAAGACGCCGTTGGACGAGCATAGCTACTTTTTCT 94 *** * **** **** ** * ************************************** consensus_2976#0 CCGCAGAAAGGACCCTAGAACTGATTGCCATCGTTGAGAGTGAACCATTTCTATGGGATA 240 consensus_2976#1 CCGCAG------------------------------------------------------ 100 ****** consensus_2976#0 AGACGCAGCTCGATTACAAGAATGTAAAAATGACTGAAAATGCCTGGCGCATGGTAGCGT 300 consensus_2976#1 ------------------------------------------------------------ consensus_2976#0 CCAAGATGGAGCTTGACGTGGAGGTGTGCAAGGAGAAGTGGACCTGTCTGCGGGCCCAGT 360 consensus_2976#1 ------------------------------------------------------------ consensus_2976#0 TTCGCAAGCTGAAGCGAAGAATGATACAGTCAAGCCAGAATGGAACAGGCACGGACGAGA 420 consensus_2976#1 ------------------------------------------------------------ consensus_2976#0 TATATCAACCATCCTGGTATGCGTACGAAGCAATGGCATTCCTAAACGAAGCAGTGGAAT 480 consensus_2976#1 ------------------------------------------------------------ consensus_2976#0 GTGAAGGTGATACAAATACGGTTGATGGAAACAACACCCAATACTGCACAGCAAACACGA 540 consensus_2976#1 ------------------------------------------------------------ consensus_2976#0 AATTGAAGCCACCGTTAGACGACATTCCCTTTCGCGGGAAAACACCCTTGAGCTTGTTTC 600 consensus_2976#1 ------------------------------------------------------------ consensus_2976#0 TATCATTGAGGGCTTGCCTGTACTGTGGAATAGAGC 636 consensus_2976#1 ------------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||