These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3036#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 434 fasta sequence [TGCCACGCCAGCTGTGCACAAAGGTGGCCACAGTGCCCATAACTCCTCAGCACAATGCGTTGCAGCGGTACTAGGATGATCTGCAGAACGAGTTTCATCAAATCCTGCGCGAAGAGCGACAATCCGTGCTCGACCCGGTGGCGGATCCGATGTCGCTTGAGGTTTTCCCTAACACCAGACCCGCCTTTAACTTTGCGGCCTACGTCAACAAATCGCCCACCCTGCAGCAACTCGTCTCGCTCGGCGTGGAGCTGCACAAGCTCGAGAAGCGTAAGGGCATCGCACAGTTTGTACTCGGGCTGGACTTCGATCGAGACATGCGGAATCACATCCGCTTCCTGGCGGACGTTGGAGTGCCGGCCGAAAGCTTGGTCGAGTTTCTGACCAAAAATCCACTCATCTTCAAGGAGGATCTGGGGGATCTCGAGACGCGA] [+] EMBL BX609519 [TGCCACGCCAGCTGTGCACAAAGGTGGCCACAGTGCCCATAACTCCTCAGCACAATGCGTTGCAGCGGTACTAGGATGATCTGCAGAACGAGTTTCATCAAATCCTGCGCGAAGAGCGACAATCCGTGCTCGACCCGGTGGCGGATCCGATGTCGCTTGAGGTTTTCCCTAACACCAGACCCGCCTTTAACTTTGCGGCCTACGTCAACAAATCGCCCACCCTGCAGCAACTCGTCTCGCTCGGCGTGGAGCTGCACAAGCTCGAGAAGCGTAAGGGCATCGCACAGTTTGTACTCGGGCTGGACTTCGATCGAGACATGCGGAATCACATCCGCTTCCTGGCGGACGTTGGAGTGCCGGCCGAAAGCTTGGTCGAGTTTCTGACCAAAAATCCACTCATCTTCAAGGAGGATCTGGGGGATCTCGAGACGCGA] consensusID : consensus_3036#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 418 fasta sequence [GAATCGCCCCGAGGGGAATTCTGCACGTGCAGGACCTTCCCTGCCACGCCAGCTGTGCACAAAGGTGGCCACAGTGCCCATAACTCCTCAGCACAATGCGTTGCAGCGGTACGAGGATGATCTGCAGAACGAGTTTCATCAAATCCTGCGCGAAGAGCGACAATCCGTGCTCGACCCGGTGGCGGATCCGATGTCGCTGGAGGTTTTCCCTAACACCAGACCCGGCCTTTAACTTTGCGGCCTACGTCAACAAATCTGCCCACCCTGCAGCAACTCCGTTCCTTCCGGCCCTTCCCGGCGTGGAGCTTGGGCCGAATGCCCTAAANTAAAGTGGGGGGCCCGTTTTCCCCGGGGGTAACTGGGGTAAATCACTGGCGGCCCTGGGGTTTTAACACTGGTGTGGGCCTATTCTGGTCGC] [+] EMBL AL932561 [GAATCGCCCCGAGGGGAATTCTGCACGTGCAGGACCTTCCCTGCCACGCCAGCTGTGCACAAAGGTGGCCACAGTGCCCATAACTCCTCAGCACAATGCGTTGCAGCGGTACGAGGATGATCTGCAGAACGAGTTTCATCAAATCCTGCGCGAAGAGCGACAATCCGTGCTCGACCCGGTGGCGGATCCGATGTCGCTGGAGGTTTTCCCTAACACCAGACCCGGCCTTTAACTTTGCGGCCTACGTCAACAAATCTGCCCACCCTGCAGCAACTCCGTTCCTTCCGGCCCTTCCCGGCGTGGAGCTTGGGCCGAATGCCCTAAANTAAAGTGGGGGGCCCGTTTTCCCCGGGGGTAACTGGGGTAAATCACTGGCGGCCCTGGGGTTTTAACACTGGTGTGGGCCTATTCTGGTCGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_3036#0 -----------------------------------------TGCCACGCCAGCTGTGCAC 19 consensus_3036#1 GAATCGCCCCGAGGGGAATTCTGCACGTGCAGGACCTTCCCTGCCACGCCAGCTGTGCAC 60 ******************* consensus_3036#0 AAAGGTGGCCACAGTGCCCATAACTCCTCAGCACAATGCGTTGCAGCGGTACTAGGATGA 79 consensus_3036#1 AAAGGTGGCCACAGTGCCCATAACTCCTCAGCACAATGCGTTGCAGCGGTACGAGGATGA 120 **************************************************** ******* consensus_3036#0 TCTGCAGAACGAGTTTCATCAAATCCTGCGCGAAGAGCGACAATCCGTGCTCGACCCGGT 139 consensus_3036#1 TCTGCAGAACGAGTTTCATCAAATCCTGCGCGAAGAGCGACAATCCGTGCTCGACCCGGT 180 ************************************************************ consensus_3036#0 GGCGGATCCGATGTCGCTTGAGGTTTTCCCTAACACCAGACCCG-CCTTTAACTTTGCGG 198 consensus_3036#1 GGCGGATCCGATGTCGCTGGAGGTTTTCCCTAACACCAGACCCGGCCTTTAACTTTGCGG 240 ****************** ************************* *************** consensus_3036#0 CCTACGTCAACAAATC-GCCCACCCTGCAGCAACTCGTCTCGCTCGGCGTGGAGCTGCAC 257 consensus_3036#1 CCTACGTCAACAAATCTGCCCACCCTGCAGCAACTC----CGTTCCTTCCGGCCCTTCCC 296 **************** ******************* ** ** ** ** * * consensus_3036#0 AAGCTCGAGAAGCGTAAGGGCATCGCACAGTTTGTACTCGGGCTGGACTTCGATCGAGAC 317 consensus_3036#1 GGCGTGGAGCTTGGGCCGAATGCCCTAAANTAAAGTGGGGGGCCCGTTTTCCCCGGGGGT 356 * *** * * * * * * **** * *** * * consensus_3036#0 ATGCGGAATCACATCCGCTTCCTGGCGGACGTTGGAGTGCCGGCCGAAAGCTTGGTCGAG 377 consensus_3036#1 AACTGGGGTAA-ATCACTGGCGGCCCTGGGGTTTTAACACTGGT-GTGGGCCTATTCTGG 414 * ** * * *** * * * *** * * ** * ** * ** * consensus_3036#0 TTTCTGACCAAAAATCCACTCATCTTCAAGGAGGATCTGGGGGATCTCGAGACGCGA 434 consensus_3036#1 TCGC----------------------------------------------------- 418 * * |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||