These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3056#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 683 fasta sequence [CCGATAAAATCATCACCACCGACGCTAATCGGGTTTAAAGGTCGTCGCGAAACTCTTCCAGCTTGTGGTTTCTGCACGATTCCCTTTTTGTTTTTTTTTTGCCTTCATTTCGTTGTAATTTAACGGTATAGTTGCATTTTAGTGAGCAGTTTTCTGGTTTCCCGTTTTCTTTTGACCAACCCCAAACGTCAATCATCGTCCCCTCTTTCTCTTCCTCAGCTCCTAGTATCCAGAGGCGCAGAGCAACCCCTACGCGCGATTAACACATTTAAGGAGTTTTTACCGTAGGCTAGGCGTAAAGGCACGCGTGGAAGTAACGCGTGGAAGTAACAAAGTTATGCATTTTCCCAAGGGCTAGCAATGGTACAAGGGACAACTTTTGGAAGGTAGGTGGGTGCCAAACACATGCCAAATTAGAAGCAGTAGCAGCACTAGCGATCAAAGGATGCATTAAAAGAAAGTTTAATTGATTGTCAAAATTCTCACCAAAGAGACTTATTTTCGTGACCAAAAAAGGTTAGTGAACGAACATAGGGCAGAAATTTGTTTGAAATTTGAAACACTTTCAACACAATTTTCGGTATCAAAACAAACACGTAAAGCAGATCCTCCTTCTTTCACTTCTTTAAAGCAAACTAGAATACAGAGAGAAAAAACAAAACAACCAGCCCTTACAAAAAGGA] [+] EMBL BM641823 [CCGATAAAATCATCACCACCGACGCTAATCGGGTTTAAAGGTCGTCGCGAAACTCTTCCAGCTTGTGGTTTCTGCACGATTCCCTTTTTGTTTTTTTTTTGCCTTCATTTCGTTGTAATTTAACGGTATAGTTGCATTTTAGTGAGCAGTTTTCTGGTTTCCCGTTTTCTTTTGACCAACCCCAAACGTCAATCATCGTCCCCTCTTTCTCTTCCTCAGCTCCTAGTATCCAGAGGCGCAGAGCAACCCCTACGCGCGATTAACACATTTAAGGAGTTTTTACCGTAGGCTAGGCGTAAAGGCACGCGTGGAAGTAACGCGTGGAAGTAACAAAGTTATGCATTTTCCCAAGGGCTAGCAATGGTACAAGGGACAACTTTTGGAAGGTAGGTGGGTGCCAAACACATGCCAAATTAGAAGCAGTAGCAGCACTAGCGATCAAAGGATGCATTAAAAGAAAGTTTAATTGATTGTCAAAATTCTCACCAAAGAGACTTATTTTCGTGACCAAAAAAGGTTAGTGAACGAACATAGGGCAGAAATTTGTTTGAAATTTGAAACACTTTCAACACAATTTTCGGTATCAAAACAAACACGTAAAGCAGATCCTCCTTCTTTCACTTCTTTAAAGCAAACTAGAATACAGAGAGAAAAAACAAAACAACCAGCCCTTACAAAAAGGA] consensusID : consensus_3056#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 140 fasta sequence [TTTTGACCAACCCCAAACGGCAATCAACGGCCCCGCATTCTCTTCCTCAGCTCCGAGGATCCAGAGGCGCAGAGCAACCCCTACGCGCGATTAACACACGTAAGGAGTTTTCACCGCAGGCTAGGCGTAAAGGCACGCGG] [+] EMBL BX618654 [TTTTGACCAACCCCAAACGGCAATCAACGGCCCCGCATTCTCTTCCTCAGCTCCGAGGATCCAGAGGCGCAGAGCAACCCCTACGCGCGATTAACACACGTAAGGAGTTTTCACCGCAGGCTAGGCGTAAAGGCACGCGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_3056#0 CCGATAAAATCATCACCACCGACGCTAATCGGGTTTAAAGGTCGTCGCGAAACTCTTCCA 60 consensus_3056#1 ------------------------------------------------------------ consensus_3056#0 GCTTGTGGTTTCTGCACGATTCCCTTTTTGTTTTTTTTTTGCCTTCATTTCGTTGTAATT 120 consensus_3056#1 ------------------------------------------------------------ consensus_3056#0 TAACGGTATAGTTGCATTTTAGTGAGCAGTTTTCTGGTTTCCCGTTTTCTTTTGACCAAC 180 consensus_3056#1 -------------------------------------------------TTTTGACCAAC 11 *********** consensus_3056#0 CCCAAACGTCAATCATCGTCCCCTCTTTCTCTTCCTCAGCTCCTAGTATCCAGAGGCGCA 240 consensus_3056#1 CCCAAACGGCAATCAACGGCCCCGCATTCTCTTCCTCAGCTCCGAGGATCCAGAGGCGCA 71 ******** ****** ** **** * ***************** ** ************* consensus_3056#0 GAGCAACCCCTACGCGCGATTAACACATTTAAGGAGTTTTTACCGTAGGCTAGGCGTAAA 300 consensus_3056#1 GAGCAACCCCTACGCGCGATTAACACACGTAAGGAGTTTTCACCGCAGGCTAGGCGTAAA 131 *************************** *********** **** ************** consensus_3056#0 GGCACGCGTGGAAGTAACGCGTGGAAGTAACAAAGTTATGCATTTTCCCAAGGGCTAGCA 360 consensus_3056#1 GGCACGCGG--------------------------------------------------- 140 ******** consensus_3056#0 ATGGTACAAGGGACAACTTTTGGAAGGTAGGTGGGTGCCAAACACATGCCAAATTAGAAG 420 consensus_3056#1 ------------------------------------------------------------ consensus_3056#0 CAGTAGCAGCACTAGCGATCAAAGGATGCATTAAAAGAAAGTTTAATTGATTGTCAAAAT 480 consensus_3056#1 ------------------------------------------------------------ consensus_3056#0 TCTCACCAAAGAGACTTATTTTCGTGACCAAAAAAGGTTAGTGAACGAACATAGGGCAGA 540 consensus_3056#1 ------------------------------------------------------------ consensus_3056#0 AATTTGTTTGAAATTTGAAACACTTTCAACACAATTTTCGGTATCAAAACAAACACGTAA 600 consensus_3056#1 ------------------------------------------------------------ consensus_3056#0 AGCAGATCCTCCTTCTTTCACTTCTTTAAAGCAAACTAGAATACAGAGAGAAAAAACAAA 660 consensus_3056#1 ------------------------------------------------------------ consensus_3056#0 ACAACCAGCCCTTACAAAAAGGA 683 consensus_3056#1 ----------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||