These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3135#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 449 fasta sequence [TGCTACGAGAGCCATCCAGCGCACCATTCAAACAACAACATCTGACTTGCGAGGAATCACACACCGATTGCACCGCGTGCGTGCGTGATTGCAGCGAAGCCGGTTACATTCGTCTTTGTGTTCCTCTGAGAAGTTTTATGTGTGTGTGTGTGTGTGCGTGCGTGCGCGTGTGTTCGTTTAGTGACAAAACGCGTCGTGTGCGGGCGTGATTTATTGTTTTAATCGTCCTTACCTAATTGTGTGTGTGTCTCCCTACCCTGTCACAAGATGCGTCGCAAAGTGCTGTTCCGTGTGGTGTGCGTGTGAGTGCAATGTCCTTTTTTGTTGGCTGAGCGGCGGCATATAACGCTCCCCATGTAACAGAAACGGGGGGAAAATAAGCCTTTCCTTCCGTAACATAACCCCAAAAAGCAGAAAGTGTGTGCGTGCGTGTGTGCGGGGATAGAGTT] [+] EMBL BX613880 [TGCTACGAGAGCCATCCAGCGCACCATTCAAACAACAACATCTGACTTGCGAGGAATCACACACCGATTGCACCGCGTGCGTGCGTGATTGCAGCGAAGCCGGTTACATTCGTCTTTGTGTTCCTCTGAGAAGTTTTATGTGTGTGTGTGTGTGTGCGTGCGTGCGCGTGTGTTCGTTTAGTGACAAAACGCGTCGTGTGCGGGCGTGATTTATTGTTTTAATCGTCCTTACCTAATTGTGTGTGTGTCTCCCTACCCTGTCACAAGATGCGTCGCAAAGTGCTGTTCCGTGTGGTGTGCGTGTGAGTGCAATGTCCTTTTTTGTTGGCTGAGCGGCGGCATATAACGCTCCCCATGTAACAGAAACGGGGGGAAAATAAGCCTTTCCTTCCGTAACATAACCCCAAAAAGCAGAAAGTGTGTGCGTGCGTGTGTGCGGGGATAGAGTT] consensusID : consensus_3135#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 317 fasta sequence [CCGCGTGTGTTCGTTTACTGACAAAACGCGTCCTGTGCGGGCGTGATTTAGTGTTTTAATCGTCCTTACCTAATTGTGTGTGTGTCTCCCTACCCTGTCACAACATGCGTCACAAAGTGCTGTTTCGTGTGGTGTGCGTGTGAGTGCAATGTCCCTTTTTCTTGGCTGAGCGGAGGCATACAACGCTCCCCATGTAACAGCGACGGGGGGAAAATAAGCCTTTCCTTCCGTAGCATAACCCCAAAAAGCAGAAAGTGTGTCCAGGGATAGAATTTGTCCCGATAGATCTTATCGTTTCCGGCAAGTGTTTGTGTGTG] [+] EMBL BM587126 [CCGCGTGTGTTCGTTTACTGACAAAACGCGTCCTGTGCGGGCGTGATTTAGTGTTTTAATCGTCCTTACCTAATTGTGTGTGTGTCTCCCTACCCTGTCACAACATGCGTCACAAAGTGCTGTTTCGTGTGGTGTGCGTGTGAGTGCAATGTCCCTTTTTCTTGGCTGAGCGGAGGCATACAACGCTCCCCATGTAACAGCGACGGGGGGAAAATAAGCCTTTCCTTCCGTAGCATAACCCCAAAAAGCAGAAAGTGTGTCCAGGGATAGAATTTGTCCCGATAGATCTTATCGTTTCCGGCAAGTGTTTGTGTGTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_3135#0 TGCTACGAGAGCCATCCAGCGCACCATTCAAACAACAACATCTGACTTGCGAGGAATCAC 60 consensus_3135#1 ------------------------------------------------------------ consensus_3135#0 ACACCGATTGCACCGCGTGCGTGCGTGATTGCAGCGAAGCCGGTTACATTCGTCTTTGTG 120 consensus_3135#1 ------------------------------------------------------------ consensus_3135#0 TTCCTCTGAGAAGTTTTATGTGTGTGTGTGTGTGTGCGTGCGTGCGCGTGTGTTCGTTTA 180 consensus_3135#1 -------------------------------------------CCGCGTGTGTTCGTTTA 17 **************** consensus_3135#0 GTGACAAAACGCGTCGTGTGCGGGCGTGATTTATTGTTTTAATCGTCCTTACCTAATTGT 240 consensus_3135#1 CTGACAAAACGCGTCCTGTGCGGGCGTGATTTAGTGTTTTAATCGTCCTTACCTAATTGT 77 ************** ***************** ************************** consensus_3135#0 GTGTGTGTCTCCCTACCCTGTCACAAGATGCGTCGCAAAGTGCTGTTCCGTGTGGTGTGC 300 consensus_3135#1 GTGTGTGTCTCCCTACCCTGTCACAACATGCGTCACAAAGTGCTGTTTCGTGTGGTGTGC 137 ************************** ******* ************ ************ consensus_3135#0 GTGTGAGTGCAATGTCCTTTTTTGTTGGCTGAGCGGCGGCATATAACGCTCCCCATGTAA 360 consensus_3135#1 GTGTGAGTGCAATGTCCCTTTTTCTTGGCTGAGCGGAGGCATACAACGCTCCCCATGTAA 197 ***************** ***** ************ ****** **************** consensus_3135#0 CAGAAACGGGGGGAAAATAAGCCTTTCCTTCCGTAACATAACCCCAAAAAGCAGAAAGTG 420 consensus_3135#1 CAGCGACGGGGGGAAAATAAGCCTTTCCTTCCGTAGCATAACCCCAAAAAGCAGAAAGTG 257 *** ****************************** ************************ consensus_3135#0 TGTGCGTGCGTG---TGTGCGGGGATAGAGTT---------------------------- 449 consensus_3135#1 TGTCCAGGGATAGAATTTGTCCCGATAGATCTTATCGTTTCCGGCAAGTGTTTGTGTGTG 317 *** * * * * ** ****** * |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||