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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3282#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 996 fasta sequence
[CCGCAACGTCTTGCCTTCATACTGTACTGCCCTCCCTCGTGCTGTCTTCCATCCTTTCCACAAGAGCTTGCACCAAATAAATATGTACAGAACGGTAGCAAACCGAACGAACAAGAGAGTTCTGCCTTTCTACCTAGCTTTCCAACCCAGCTTTCGTTCGATTTGATGCAGTTTTGCAACTGGAGCTTCTACACCTTCTAAATGCTTTGCCTATGCGAGACTCTTTGCCTCTCTCTCTCTCACTCTTTCGACTAGTATGTGTACAGGGCCAGCATGCGAGCAGCAGTAAAGGTTTCGCTTTTTTTTTTACACTTTCACCTACTGTGCCCCTGCCGCAAGTGGCCGACTGACTAGTATGACTAGAATGTTACTCGCTGTCACGTCGGAACGGATCGACGTGTTGGTTCTGCCCCCGTTCCTTCTCTCGCTTCTCGGCTCGTATGCTTTACTAAAAGAAAGAGTAAGGCAATGAAAGAGATACGATAAATTCGCACTAGAGGGCGTTTAATCCGGTTAAGGAACCCCCCATAGCTGCCTAACTAGAACCTCTTGCGTCATAGCAAAATGACTGTGTACCATTTGCAACCAAATAAACCCGGGTACGCGTGTAGAGTGTTTAACAACTTAAGCATAAGTTCGGTATAGCCGTATTAACGTAAGGAACGTATGTAATGGGGATACATCGAAAAAAAAACAGAAAGTAATACCAAACCCAACAATAAACTAGCTCACCCACGCTGCGGGTGTTTCAATTATACTACTCTCTCACTACCGCTCAGTACAGATACTGATCGATGAGGTGCAGCTAGAGCGGCGTCACCGTCGCGCTGCTCTCCGTGACCGCCTCCGCCAGATAGTTCTTGATGAAGTACGGCAGCGCCAGCCGGTCCAGCTTTTCCCGCGTGTTAATGTGCTTGATGATGATGGCCCGGCACCGGTCCTGCAGGTTCACAAAGTCCCGGCGCGTCTCCGACAGCAGCATCTCCGTCTTGGCCG]
[+] EMBL BX611767 [CCGCAACGTCTTGCCTTCATACTGTACTGCCCTCCCTCGTGCTGTCTTCCATCCTTTCCACAAGAGCTTGCACCAAATAAATATGTACAGAACGGTAGCAAACCGAACGAACAAGAGAGTTCTGCCTTTCTACCTAGCTTTCCAACCCAGCTTTCGTTCGATTTGATGCAGTTTTGCAACTGGAGCTTCTACACCTTCTAAATGCTTTGCCTATGCGAGACTCTTTGCCTCTCTCTCTCTCACTCTTTCGACTAGTATGTGTACAGGGCCAGCATGCGAGCAGCAGTAAAGGTTTCGCTTTTTTTTTTACACTTTCACCTACTGTGCCCCTGCCGCAAGTGGCCGACTGACTAGTATGACTAGAATGTTACTCGCTGTCACGTCGGAACGGATCGACGTGTTGGTTCTGCCCCCGTTCCTTCTCTCGCTTCTCGGCTCGTATGCTTTACTAAAAGAAAGAGTAAGGCAATGAAAGAGATACGATAAATTCGCACTAGAGGGCGTTTAATCCGGTTAAGGAACCCCCCATAGCTGCCTAACTAGAACCTCTTGCGTCATAGCAAAATGACTGTGTACCATTTGCAACCAAATAAACCCGGGTACGCGTGTAGAGTGTTTAACAACTTAAGCATAAGTTCGGTATAGCCGTATTAACGTAAGGAACGTATGTAATGGGGATACATCGAAAAAAAAACAGAAAGTAATACCAAACCCAACAATAAAC ]
[-] EMBL BX611768 [ GGTTAAGGAACCCCCCATAGCTGCCTAACTAGAACCTCTTGCGTCATAGCAAAATGACTGTGTACCATTTGCAACCAAATAAACCC GGTACGCGTGTAGAGTGTTTAACAACTTAAGCATAAGTTCGGTATAGCCGTATTAACGTAAGGAACGTATGTAATGGGGATACATCGAAAAAAAAACAGAAAGTAATACCAAACCCAACAATAAACTAGCTCACCCACGCTGCGGGTGTTTCAATTATACTACTCTCTCACTACCGCTCAGTACAGATACTGATCGATGAGGTGCAGCTAGAGCGGCGTCACCGTCGCGCTGCTCTCCGTGACCGCCTCCGCCAGATAGTTCTTGATGAAGTACGGCAGCGCCAGCCGGTCCAGCTTTTCCCGCGTGTTAATGTGCTTGATGATGATGGCCCGGCACCGGTCCTGCAGGTTCACAAAGTCCCGGCGCGTCTCCGACAGCAGCATCTCCGTCTTGGCCG]
consensusID : consensus_3282#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 455 fasta sequence
[ACACACATACTTAATCACGCGTTCTCGCCCCTTCGATCATTCATCTTCACACACCAGACACACACACAGCTCAGACAAACACTCACGCCCCGCAATAACTCTGTACCTTCTTACTGAAAAGCTTAAATGCCTAAATTCCCGATTAAACGGGTTGCTAAATTTTGCCACATTCTCCACCTTTTTCATTTCCTTCCGCAACGTCTTGCCTTCATACTGTACTGCCCTCCCTCGTGCTGTCTTCCATCCTTTCCACCAGAGCTTGCACCAAATAAATATGTACAGAACGGTAGCAAACCGAACGAACAAGAGAGTTCTGCTTTTCCACCTAGCTTTCCAACCCAGCTTTCGTTCGATTTGGTGCAGTTTTGCAACTGGAGCTTCTACACCTTCTAAATGCTTTGCCTATGCGAGACTCTTTGCCTCTCTCTCTCTCTCTCTCTCACTCTTTCGACCGG]
[-] EMBL BM625956 [ACACACATACTTAATCACGCGTTCTCGCCCCTTCGATCATTCATCTTCACACACCAGACACACACACAGCTCAGACAAACACTCACGCCCCGCAATAACTCTGTACCTTCTTACTGAAAAGCTTAAATGCCTAAATTCCCGATTAAACGGGTTGCTAAATTTTGCCACATTCTCCACCTTTTTCATTTCCTTCCGCAACGTCTTGCCTTCATACTGTACTGCCCTCCCTCGTGCTGTCTTCCATCCTTTCCACCAGAGCTTGCACCAAATAAATATGTACAGAACGGTAGCAAACCGAACGAACAAGAGAGTTCTGCTTTTCCACCTAGCTTTCCAACCCAGCTTTCGTTCGATTTGGTGCAGTTTTGCAACTGGAGCTTCTACACCTTCTAAATGCTTTGCCTATGCGAGACTCTTTGCCTCTCTCTCTCTCTCTCTCTCACTCTTTCGACCGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_3282#0 ------------------------------------------------------------
consensus_3282#1 ACACACATACTTAATCACGCGTTCTCGCCCCTTCGATCATTCATCTTCACACACCAGACA 60
consensus_3282#0 ------------------------------------------------------------
consensus_3282#1 CACACACAGCTCAGACAAACACTCACGCCCCGCAATAACTCTGTACCTTCTTACTGAAAA 120
consensus_3282#0 ------------------------------------------------------------
consensus_3282#1 GCTTAAATGCCTAAATTCCCGATTAAACGGGTTGCTAAATTTTGCCACATTCTCCACCTT 180
consensus_3282#0 ------------CCGCAACGTCTTGCCTTCATACTGTACTGCCCTCCCTCGTGCTGTCTT 48
consensus_3282#1 TTTCATTTCCTTCCGCAACGTCTTGCCTTCATACTGTACTGCCCTCCCTCGTGCTGTCTT 240
************************************************
consensus_3282#0 CCATCCTTTCCACAAGAGCTTGCACCAAATAAATATGTACAGAACGGTAGCAAACCGAAC 108
consensus_3282#1 CCATCCTTTCCACCAGAGCTTGCACCAAATAAATATGTACAGAACGGTAGCAAACCGAAC 300
************* **********************************************
consensus_3282#0 GAACAAGAGAGTTCTGCCTTTCTACCTAGCTTTCCAACCCAGCTTTCGTTCGATTTGATG 168
consensus_3282#1 GAACAAGAGAGTTCTGCTTTTCCACCTAGCTTTCCAACCCAGCTTTCGTTCGATTTGGTG 360
***************** **** ********************************** **
consensus_3282#0 CAGTTTTGCAACTGGAGCTTCTACACCTTCTAAATGCTTTGCCTATGCGAGACTCTTTGC 228
consensus_3282#1 CAGTTTTGCAACTGGAGCTTCTACACCTTCTAAATGCTTTGCCTATGCGAGACTCTTTGC 420
************************************************************
consensus_3282#0 CTCTCTCTCTCTCACTCTTTCGACTAGTATGTGTACAGGGCCAGCATGCGAGCAGCAGTA 288
consensus_3282#1 CTCTCTCTCTCTCTCTCTCTC----ACTCTTTCGACCGG--------------------- 455
************* **** ** * * * * ** **
consensus_3282#0 AAGGTTTCGCTTTTTTTTTTACACTTTCACCTACTGTGCCCCTGCCGCAAGTGGCCGACT 348
consensus_3282#1 ------------------------------------------------------------
consensus_3282#0 GACTAGTATGACTAGAATGTTACTCGCTGTCACGTCGGAACGGATCGACGTGTTGGTTCT 408
consensus_3282#1 ------------------------------------------------------------
consensus_3282#0 GCCCCCGTTCCTTCTCTCGCTTCTCGGCTCGTATGCTTTACTAAAAGAAAGAGTAAGGCA 468
consensus_3282#1 ------------------------------------------------------------
consensus_3282#0 ATGAAAGAGATACGATAAATTCGCACTAGAGGGCGTTTAATCCGGTTAAGGAACCCCCCA 528
consensus_3282#1 ------------------------------------------------------------
consensus_3282#0 TAGCTGCCTAACTAGAACCTCTTGCGTCATAGCAAAATGACTGTGTACCATTTGCAACCA 588
consensus_3282#1 ------------------------------------------------------------
consensus_3282#0 AATAAACCCGGGTACGCGTGTAGAGTGTTTAACAACTTAAGCATAAGTTCGGTATAGCCG 648
consensus_3282#1 ------------------------------------------------------------
consensus_3282#0 TATTAACGTAAGGAACGTATGTAATGGGGATACATCGAAAAAAAAACAGAAAGTAATACC 708
consensus_3282#1 ------------------------------------------------------------
consensus_3282#0 AAACCCAACAATAAACTAGCTCACCCACGCTGCGGGTGTTTCAATTATACTACTCTCTCA 768
consensus_3282#1 ------------------------------------------------------------
consensus_3282#0 CTACCGCTCAGTACAGATACTGATCGATGAGGTGCAGCTAGAGCGGCGTCACCGTCGCGC 828
consensus_3282#1 ------------------------------------------------------------
consensus_3282#0 TGCTCTCCGTGACCGCCTCCGCCAGATAGTTCTTGATGAAGTACGGCAGCGCCAGCCGGT 888
consensus_3282#1 ------------------------------------------------------------
consensus_3282#0 CCAGCTTTTCCCGCGTGTTAATGTGCTTGATGATGATGGCCCGGCACCGGTCCTGCAGGT 948
consensus_3282#1 ------------------------------------------------------------
consensus_3282#0 TCACAAAGTCCCGGCGCGTCTCCGACAGCAGCATCTCCGTCTTGGCCG 996
consensus_3282#1 ------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||