Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 3438 cluster # 3438       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3438#0 length = 1230 sequences # 3  

consensusID : consensus_3438#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1230
fasta sequence
                              [CCGCCCACGCGTCCGGTAGGAAAGAGCCAGTAGATCTCACAATTCTCTTTACACTTTTTGAGTTGCTTGATTTCACGAACGGCGGGAAAGCGTGTAGAGAAAACTGCAGACACTGCTCCTGCTAGTAGTAGTAGTAACGAACGAAAATGCCAAAAAACGAACCAGAAAACACCCC------CACTCCCCCTAGACTGTATGTGTGTAGCAGTGGGGACACTTTCCCCGCTCACGCATGGGGAGAATCCTTTCATAAACCTTTGCGTTTTACAACAAATGCCATCCTTCTTCGTCCACTGTGGGTGTG-TGAAAGTGGAAGTTGTAATTTACTTGCGTTGTAAATATTGTACATTTTAGTTTGTTTTGTGTAAGGTAAATAGGTTCGATTTCGTTTCTCAATTTCGGTTCTACGTACACACTAAAAAACATACACACACAAATAACAGCCTTCTGTTTTGATTATGTTCTCGATATCGTATCATTTAACTTGGAACTGGAATTGAAAGACAAAAATGCTCAACCGAAAATGAGCTCCAAAACCAAACCAATCGCACGGCTGGAAGACGTTTGATGAATCTGCTGCCCGCAAGCGCATCAAAGAAACTACTACTTACTTAAAATCAACCAAATTAAATTCAAATGAACATCCCCCTCCCTTAAGCAGTACTACGTATTAAAATGTCGAATTTCTTCCTCCCTATAAAGT-CCACAAATCTCTCCTCTACCATGTCTGTGTGTGTGCGTGTGTGTATTGTCGGCCAAGAAAGCGAATTCGCAACAGTAGTATTGTCATGTGTCCTCTAACCGTAAAACCATAAGAGAATCATTACAATTAAGAATGAATGAATGTATTTTTGTTTGTTTGTTTTGTGTTTTCCTATTCCCTCATCCGAGCGTACTTTTTGCCCGTTTATCTCTCCCATCATGATCATTCGATTGGAAGCAAAATTGCGATCATAAAACACAGCGCTTTTTAAGGATGTGTGCGCGAATAGTAAATGAGCATTTGGAGTATCCAATTCGCAATAAATAAAAGTAAGAAAACGAATTAATCCGCTTCTCATACCAAAACATTTCACGAAACGAATAGTCAAAAACGAATCGGAACCAACGAATCAGGCTCAAGGCACACACACATTTCTAGAAATAAACCCACGCCCATCCGTTGTGGAGAAGAATTGAAGGGACGCTCGAACACGGAGGTGGATAAGGAGGAGGGGAATGGTATTCGAAATG]

[+] EMBL BM617600             [CCGCCCACGCGTCCGGTAGGAAAGAGCCAGTAGATCTCACAATTCTCTTTACACTTTTTGAGTTGCTTGATTTCACGAACGGCGGGAAAGCGTGTAGAGAAAACTGCAGACACTGCTCCTGCTAGTAGTAGTAGTAACGAACGAAAATGCCAAAAAACGAACCAGAAAACACCCC      CACTCCCCCTAGACTGTATGTGTGTAGCAGTGGGGACACTTTCCCCGCTCACGCATGGGGAGAATCCTTTCATAAACCTTTGCGTTTTACAACAAATGCCATCCTTCTTCGTCCACTGTGGGTGTG TGAAAGTGGAAGTTGTAATTTACTTGCGTTGTAAATATTGTACATTTTAGTTTGTTTTGTGTAAGGTAAATAGGTTCGATTTCGTTTCTCAATTTCGGTTCTACGTACACACTAAAAAACATACACACACAAATAACAGCCTTCTGTTTTGATTATGTTCTCGATATCGTATCATTTAACTTGGAACTGGAATTGAAAGACAAAAATGCTCAACCGAAAATGAGCTCCAAAACCAAACCAATCGCACGGCTGGAAGACGTTTGATGAATCTGCTGCCCGCAAGCGCATCAAAGAAACTACTACTTACTTAAAATCAACCAAATTAAATTCAAATGAACATCCCCCTCCCTTAAGCAGTACTACGTATTAAAATGTCGAATTTCTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BX620296             [                                                                                           GTGTAGAGAAAACTGCAGACACTGCTCCTGCTAGTAGTAGTAGTAACGAACGAAAATGCCAAAAAACGAACCAGAAAACACCCCCACAAACACTCCCCCCAGACTGTATGTGTGTAGGAGTGGGGACACTTTCCCCGCTCACACATGGGGAGAATCCTTTCATAAACCTTTGCGTTTTACAACAAATGCCATCCTTCTTCGTCCACTGTGGGTGTGTTGAAAGTGGAGGTTGTAATTTACTTGCGTTGTAAATATTGTACATTTTAGTTTGTTTTGTCTAAGGTAAATAGGTTCGATTTCGGTTCTCAATATCGGTTCTACGTACACACT AAAAACAT    ACACAAATAACAGCCTTCTGTTTTGAATATGTTCTCAATATCGTATCCTTTAACCTGGAACTGGAATTGAAAGACAAAAATGCTCAACCGAAAATGAGCTCCAAAACCAAACCAATCGCACGGCTGGAAGACGTTTGATGAATCTGCTGCCCGCAAGCGCATCAAAGAAGCTACTACTTACTTAAAATCAATCAAACTAAATTCAAATGAACATCCCCCTCCCTTAAGCAGTACTACGTATTAAAGTGTCGAATTTCTTCCTCCCTATAAAGT CCACAAATCTCTCCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX611883             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ACTTAAAATCAACCAAATTAAATTCAAATGAACATCCCCCTCCCTTAAGCAGTACTACGTATTAAAATGTCGAATTTCTTCCTCGCTATAAAGTCCCACAAATCTCTCCTCTACCATGTCTGTGTGTGTGCGTGTGTGTATTGTCGGCCAAGAAAGCGAATTCGCAACAGTAGTATTGTCATGTGTCCTCTAACCGTAAAACCATAAGAGAATCATTACAATTAAGAATGAATGAATGTATTTTTGTTTGTTTGTTTTGTGTTTTCCTATTCCCTCATCCGAGCGTACTTTTTGCCCGTTTATCTCTCCCATCATGATCATTCGATTGGAAGCAAAATTGCGATCATAAAACACAGCGCTTTTTAAGGATGTGTGCGCGAATAGTAAATGAGCATTTGGAGTATCCAATTCGCAATAAATAAAAGTAAGAAAACGAATTAATCCGCTTCTCATACCAAAACATTTCACGAAACGAATAGTCAAAAACGAATCGGAACCAACGAATCAGGCTCAAGGCACACACACATTTCTAGAAATAAACCCACGCCCATCCGTTGTGGAGAAGAATTGAAGGGACGCTCGAACACGGAGGTGGATAAGGAGGAGGGGAATGGTATTCGAAATG]


>consensus_3438#0 CCGCCCACGCGTCCGGTAGGAAAGAGCCAGTAGATCTCACAATTCTCTTTACACTTTTTG AGTTGCTTGATTTCACGAACGGCGGGAAAGCGTGTAGAGAAAACTGCAGACACTGCTCCT GCTAGTAGTAGTAGTAACGAACGAAAATGCCAAAAAACGAACCAGAAAACACCCCCACTC CCCCTAGACTGTATGTGTGTAGCAGTGGGGACACTTTCCCCGCTCACGCATGGGGAGAAT CCTTTCATAAACCTTTGCGTTTTACAACAAATGCCATCCTTCTTCGTCCACTGTGGGTGT GTGAAAGTGGAAGTTGTAATTTACTTGCGTTGTAAATATTGTACATTTTAGTTTGTTTTG TGTAAGGTAAATAGGTTCGATTTCGTTTCTCAATTTCGGTTCTACGTACACACTAAAAAA CATACACACACAAATAACAGCCTTCTGTTTTGATTATGTTCTCGATATCGTATCATTTAA CTTGGAACTGGAATTGAAAGACAAAAATGCTCAACCGAAAATGAGCTCCAAAACCAAACC AATCGCACGGCTGGAAGACGTTTGATGAATCTGCTGCCCGCAAGCGCATCAAAGAAACTA CTACTTACTTAAAATCAACCAAATTAAATTCAAATGAACATCCCCCTCCCTTAAGCAGTA CTACGTATTAAAATGTCGAATTTCTTCCTCCCTATAAAGTCCACAAATCTCTCCTCTACC ATGTCTGTGTGTGTGCGTGTGTGTATTGTCGGCCAAGAAAGCGAATTCGCAACAGTAGTA TTGTCATGTGTCCTCTAACCGTAAAACCATAAGAGAATCATTACAATTAAGAATGAATGA ATGTATTTTTGTTTGTTTGTTTTGTGTTTTCCTATTCCCTCATCCGAGCGTACTTTTTGC CCGTTTATCTCTCCCATCATGATCATTCGATTGGAAGCAAAATTGCGATCATAAAACACA GCGCTTTTTAAGGATGTGTGCGCGAATAGTAAATGAGCATTTGGAGTATCCAATTCGCAA TAAATAAAAGTAAGAAAACGAATTAATCCGCTTCTCATACCAAAACATTTCACGAAACGA ATAGTCAAAAACGAATCGGAACCAACGAATCAGGCTCAAGGCACACACACATTTCTAGAA ATAAACCCACGCCCATCCGTTGTGGAGAAGAATTGAAGGGACGCTCGAACACGGAGGTGG ATAAGGAGGAGGGGAATGGTATTCGAAATG



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)