These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3693#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 797 fasta sequence [CGAGGTTNGGTTGCCTATNTCAGACTGNNATGCTAGATACTTTTATGGTGATCTGGTCCTGTNCTCCTGTGAAGGTTACGGTTCCGATGCAATAATTTATCTCAAGGCATATTTCAGATGAAGCAAACGAATNGTATACCAATATNTCAATAAAACTAGCACCAGATATTATAAAGCAACCGTACCAACTGGTGATATGGTCCAATCAGGGCAAGGAACTTTACCAACAGGTTGTTGTAGCCGTTTTACTAAACGACCTTGTTGTTACGAATGTGATGTAANAGGAGCTCAAATTGACAGNAACGACTGGATCTACAACTGACCGCTCGCGCCCTACTCATATNGGTTACCCAAATTTGGAACGGAAACTTCTTAATTTCTTCCCCCGGCCTTNTACTACTTAACTACTTAAACTTACTAACCGATTGTTCGCCTGGACGNCTAACCAAANTGGTTCNANGGGTCTATAACAGNCGGCACCCCTTTCNGGCTATCGACGGTANACCCTNACCCTACTTNCTCTGGACTGCACTTAAANNGATACAAANCATGNNTCAAAAAATGGCNTACCCCTAGGCCTGCATCNAANCTCTCCAACATTACTCAACACCTTGGCTTACTTCCATAAACCAACCGGCTCTACTTACNCNGCACGTCNNCCTNNCTTNCACCCCGCCCGATCCACNTGCACNACACCCTANTTAAGNTNAGGANATGGGATCTAAAGNCCTTANCANACCNACCCCCACCTTCCNNTACACCACCACCACGNCAACANGCACAACACCAAACACCNC] [+] EMBL AL692548 [CGAGGTTNGGTTGCCTATNTCAGACTGNNATGCTAGATACTTTTATGGTGATCTGGTCCTGTNCTCCTGTGAAGGTTACGGTTCCGATGCAATAATTTATCTCAAGGCATATTTCAGATGAAGCAAACGAATNGTATACCAATATNTCAATAAAACTAGCACCAGATATTATAAAGCAACCGTACCAACTGGTGATATGGTCCAATCAGGGCAAGGAACTTTACCAACAGGTTGTTGTAGCCGTTTTACTAAACGACCTTGTTGTTACGAATGTGATGTAANAGGAGCTCAAATTGACAGNAACGACTGGATCTACAACTGACCGCTCGCGCCCTACTCATATNGGTTACCCAAATTTGGAACGGAAACTTCTTAATTTCTTCCCCCGGCCTTNTACTACTTAACTACTTAAACTTACTAACCGATTGTTCGCCTGGACGNCTAACCAAANTGGTTCNANGGGTCTATAACAGNCGGCACCCCTTTCNGGCTATCGACGGTANACCCTNACCCTACTTNCTCTGGACTGCACTTAAANNGATACAAANCATGNNTCAAAAAATGGCNTACCCCTAGGCCTGCATCNAANCTCTCCAACATTACTCAACACCTTGGCTTACTTCCATAAACCAACCGGCTCTACTTACNCNGCACGTCNNCCTNNCTTNCACCCCGCCCGATCCACNTGCACNACACCCTANTTAAGNTNAGGANATGGGATCTAAAGNCCTTANCANACCNACCCCCACCTTCCNNTACACCACCACCACGNCAACANGCACAACACCAAACACCNC] consensusID : consensus_3693#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 784 fasta sequence [AAGTGGATCAACTTTTCAAGTACATGTACAGTACTGCACCTCAACCGCCGAAATCTAAAACAGATTTGCCGTTAGTTCCATTGGCTGGATATGGATACGGGTTGCCCATTTCCAGACTGTATGCTAGATACTTTCATGGTGATCTGGTCCTGTTCTCCTGTGAAGGTTACGGTTCCGATGCAATAATTTATCTCAAGGCATTTTCAGATGAAGCAAACGAATTGTTACCAATATTCAATAAAACTAGCACCAGATTTTATAAAGCAACCGTACCAACTGGTGATTGGTCCAATCAGGTAAAGGGCAAAAAAATCAAACCTCCTATAGTTATATAATTATTACTTCATCAGTTGTTATGTTCGTTACTATAATTGAACCCTTTGGTTAATCAGAATTGTGCAACATCAGGATCAAATAATTGATGAAAGATATAAACATATATCAATTAAAGTAATATAAGCATTTTATCGGCTTTCATGGACTTTTATGTCTATGAACTATTATGGATATTTTGTTAATTATAAAATTATGTGCTGTAAGAGATTGTAAATCTTAAAGCTTTCACTATATAATTTCCGTTGGATCATCCACCATTGTACGTAATATTTGCAGCCCACCTTATCAACATCTTAGGTGTAGTATTAAAAATACATTACTTGTAGGAGGTAATATTGTAGGTATAGTATTTTATGTTGTGGCGTTCTAGCTTGAATACGTTTGAATAGTTTTCTTTTGTTCCCTCTTCGCATCTTCTTATTGTTTATTGTTGCGGGCATTTCCGTCT] [+] EMBL BX608614 [AAGTGGATCAACTTTTCAAGTACATGTACAGTACTGCACCTCAACCGCCGAAATCTAAAACAGATTTGCCGTTAGTTCCATTGGCTGGATATGGATACGGGTTGCCCATTTCCAGACTGTATGCTAGATACTTTCATGGTGATCTGGTCCTGTTCTCCTGTGAAGGTTACGGTTCCGATGCAATAATTTATCTCAAGGCATTTTCAGATGAAGCAAACGAATTGTTACCAATATTCAATAAAACTAGCACCAGATTTTATAAAGCAACCGTACCAACTGGTGATTGGTCCAATCAGGTAAAGGGCAAAAAAATCAAACCTCCTATAGTTATATAATTATTACTTCATCAGTTGTTATGTTCGTTACTATAATTGAACCCTTTGGTTAATCAGAATTGTGCAACATCAGGATCAAATAATTGATGAAAGATATAAACATATATCAATTAAAGTAATATAAGCATTTTATCGGCTTTCATGGACTTTTATGTCTATGAACTATTATGGATATTTTGTTAATTATAAAATTATGTGCTGTAAGAGATTGTAAATCTTAAAGCTTTCACTATATAATTTCCGTTGGATCATCCACCATTGTACGTAATATTTGCAGCCCACCTTATCAACATCTTAGGTGTAGTATTAAAAATACATTACTTGTAGGAGGTAATATTGTAGGTATAGTATTTTATGTTGTGGCGTTCTAGCTTGAATACGTTTGAATAGTTTTCTTTTGTTCCCTCTTCGCATCTTCTTATTGTTTATTGTTGCGGGCATTTCCGTCT] consensusID : consensus_3693#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 779 fasta sequence [CATGCTGTTTGAGCTATTCANGAACTCAATGCGTGCTGTAATGGAGCATCACGGAACAGAAAATGATGTGCCTCCGATCAAGGTTACTATCGTAAAGGGTAAAGAGGATATATGTGTTAAGATGTCCGATCAAGGGGGCGGTATTCCACGATCGCAAGTGGATCAACTTTTCAAGTACATGTACAGTACTGCACCTCAACCGCCGAAATCTAAAACAGATTTGCCGTTAGTTCCATTGGCTGGATATGGATACGGGTTGCCCATTTCCAGACTGTATGCTAGATACTTTCATGGTGATCTGGTCCTGTTCTCCTGTGAAGGTTACGGTTCCGATGCAATAATTTATCTCAAGGCATTTTCAGATGAAGCAAACGAATTGTTACCAATATTCAATAAAACTAGCACCAGATTTTATAAAGCAACCGTACCAACTGGTGATTGGTCCAATCAGGGCAAGAACTTTACCAACAGGTTGTTGTAGCCGTTTTACTAACGACTGTTGTACGAATGTGATGTTTAGAGCTCAATTGACAGTACGATGGATCTCAACTGACCGTCGCCCTTTATTTGTCCCAATTTGACGAACTCTATTCTTCCCGCTTACTACTACTACTACTTCTACGTGTCGCTGAGCTACAATGTTTGGTTTAACGACCTTTGTTGACGTTTTTAGCTATTTTGATGATAGTTACTTCAATGTTCTGTTTTATTTTATTAAATGTATCTTTTTCGTTATAAGATTATATAAAAATTATGAAAATATATTGATGTTTATATTT] [+] EMBL BX625960 [CATGCTGTTTGAGCTATTCANGAACTCAATGCGTGCTGTAATGGAGCATCACGGAACAGAAAATGATGTGCCTCCGATCAAGGTTACTATCGTAAAGGGTAAAGAGGATATATGTGTTAAGATGTCCGATCAAGGGGGCGGTATTCCACGATCGCAAGTGGATCAACTTTTCAAGTACATGTACAGTACTGCACCTCAACCGCCGAAATCTAAAACAGATTTGCCGTTAGTTCCATTGGCTGGATATGGATACGGGTTGCCCATTTCCAGACTGTATGCTAGATACTTTCATGGTGATCTGGTCCTGTTCTCCTGTGAAGGTTACGGTTCCGATGCAATAATTTATCTCAAGGCATTTTCAGATGAAGCAAACGAATTGTTACCAATATTCAATAAAACTAGCACCAGATTTTATAAAGCAACCGTACCAACTGGTGATTGGTCCAATCAGGGCAAGAACTTTACCAACAGGTTGTTGTAGCCGTTTTACTAACGACTGTTGTACGAATGTGATGTTTAGAGCTCAATTGACAGTACGATGGATCTCAACTGACCGTCGCCCTTTATTTGTCCCAATTTGACGAACTCTATTCTTCCCGCTTACTACTACTACTACTTCTACGTGTCGCTGAGCTACAATGTTTGGTTTAACGACCTTTGTTGACGTTTTTAGCTATTTTGATGATAGTTACTTCAATGTTCTGTTTTATTTTATTAAATGTATCTTTTTCGTTATAAGATTATATAAAAATTATGAAAATATATTGATGTTTATATTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_3693#0 ------------------------------------------------------------ consensus_3693#2 ------------------------------------------------------------ consensus_3693#1 AAGTGGATCAACTTTTCAAGTACATGTACAGTACTGCACCTCAACCGCCGAAATCTAAAA 60 consensus_3693#0 -----------------------------CGAGGTT-NG-GTTGCCTATN---TCAGACT 26 consensus_3693#2 ---------------------------CATGCTGTT-TGAGCTATTCANGAACTCAATGC 32 consensus_3693#1 CAGATTTGCCGTTAGTTCCATTGGCTGGATATGGATACGGGTTGCCCATT--TCCAGACT 118 * * * * * * ** consensus_3693#0 GNNATGCTAGATACTTTTATGGTG-ATCTGGTCCTGTNCTCCTG-TGAAGGTTACGGTTC 84 consensus_3693#2 GTGCTGTAATGGAGCATCACGGAACAGAAAATGATGTGCCTCCGATCAAGGTTACTATCG 92 consensus_3693#1 GTA-TGCTAGATACTTTCATGGTG-ATCTGGTCCTGTTCTCCTG-TGAAGGTTACGGTTC 175 * ** * * * * ** * * *** * * * * ******** * consensus_3693#0 CGATGCAATAATTTATCTCAAGGCATATTTCAGATGAAGCAAACGAATNGTATACCAATA 144 consensus_3693#2 TAAAG-GGTAA--------AGAGGATATATGTGTTAAGATGTCCGATCAAGGGGGCGGTA 143 consensus_3693#1 CGATGCAATAATTTATCTCAAGGCAT-TTTCAGATGAAGCAAACGAATTGT-TACCAATA 233 * * *** * * ** * * * * * *** * ** consensus_3693#0 TNTCAATAAAACTAGCACCAGATATTATAAAGCAACCGTACCAACTGGTGATATGGTCCA 204 consensus_3693#2 TTCCACGATCGCAAGTGGATCAACTTTTCAAGTACATGTACAGTACTGCACCTCAACCGC 203 consensus_3693#1 TT-CAATAAAACTAGCACCAGATTTTATAAAGCAACCGTACCAACTGGTGAT-TGGTCCA 291 * ** * * ** * ** * *** * **** * * consensus_3693#0 ATCAGGGCAAGGAACTTTACCAACAGGTTGTTGTAGCCGTTTTACTAAACGACCTTGTTG 264 consensus_3693#2 CGAAATCTAAAACAGATTTGCCGTTAGTTCCATTGGCTGGATATGGATACGGGTTGCCCA 263 consensus_3693#1 ATCAGGTAAAGGGCAAAAAAATCAAACCTCCTATAGTTATATAATTA--TTACTTCATCA 349 * ** * * * * * * consensus_3693#0 TTACGAATGTGATGTAANAGGAGCTCAAATTGACAGNAACGACTGGATCTACAACTGACC 324 consensus_3693#2 TTTCCAGACTG-TATGCTAGATACTTTCAT-GGTGATCTGGTCCTGTTCTCCTG-TGAAG 320 consensus_3693#1 GT-------TGTTATGTTCGTTACTATAATTGAACCCTTTGGTTAATCAGAATTGTGCAA 402 * ** * * * ** ** * * ** consensus_3693#0 GCTCGCGCCCTACTCAT--ATNGGTTACCCAAA----TTTGGAACGGAAACTTCTTAATT 378 consensus_3693#2 GTTACGGTTCCGATGCA--ATAATTTATCTCAAGGCATTTTCAGATGAAGCAAACGAATT 378 consensus_3693#1 CATCAGGATCAAATAATTGATGAAAGATATAAACATATAT-CAATTAAAGTAATATAAGC 461 * * * * ** * ** * * * ** ** consensus_3693#0 TCTTCCCCCGGCCTTNTACTACTTAACTACTTAAACTTACTAACCGATTGTTCGCCTGGA 438 consensus_3693#2 GTTA---CCAATATTCAATAAAACTAGCACCAGATTTTATAAAGCAACCGTACCAACTGG 435 consensus_3693#1 ATTTTA-TCGGCTTTCATGGACTTTTATGTCTATGAACTATTATGGATATTTTG--TTAA 518 * * ** * * * * consensus_3693#0 CGNCTAACCAAANTGGTTCNANGGGTCTAT-AACAGNCGGC-ACCCCTTTCNGGCTATCG 496 consensus_3693#2 TGATTGGTCCAATCAGGGCAAGAACTTTACCAACAGGTTGTTGTAGCCGTTTTACTAACG 495 consensus_3693#1 TTATAAAATTATGTGCTGTAAGAGATTGTAAATCTTAAAGCTTTCACTATATAATTTCCG 578 * * * * * * * * * ** consensus_3693#0 ----ACGGTANACCCTNACCCTACTTNCTCTGGACTGCACTTAAANNGATACAAANCATG 552 consensus_3693#2 ----ACTGT-TGTACGAATGTGA--TGTTTAGAGCTCAATTGACAGTACGATGGATCTCA 548 consensus_3693#1 TTGGATCATCCACCATTGTACGTAATATTTGCAGCCCACCTTATCAACATCTTAGGTGTA 638 * * * * * * * consensus_3693#0 NNTCAAAAAATGGCNTACCCCTAGGCCTGCATCNAANCTCTCCAACATTACTCAACACCT 612 consensus_3693#2 ACT--GACCGTCGCCCTTTATTTGTCCCAATTTGACGAACTCTATTCTTCCCGCTTACTA 606 consensus_3693#1 GTATTAAAAATACATTACTTGTAGGAGGTAATATTGTAGGTATAGTATTTT---ATGTTG 695 * * * * * * * ** consensus_3693#0 TGGCT--TACTTCCATAAACCAACCGGCTCTACTTACNCNGCACGTCNNCCTNNCTTNCA 670 consensus_3693#2 CTACTACTACTTCTACGTGTCGCTGAGCTACAAT-GTTTGGTTTAACGACCTTTGTTG-- 663 consensus_3693#1 TGGCG-----TTCTA-GCTTGAATACGTTTGAATAGTTTTCTTTTGTTCCCTCTTCGCAT 749 * *** * * * * * *** consensus_3693#0 CCCCGCCCGATCCACNTGCACNACACCCTANTTAAGNTNAGGANATGGGATCTAAAGNCC 730 consensus_3693#2 -ACGTTTTTAGCTATTTTGATGA-----TAGTTACTTCAATGTTCTG--TTTTATTTTAT 715 consensus_3693#1 CTTCTTATTGTTTATTGTTGCGGG----CATTTCCGTCT--------------------- 784 * * ** consensus_3693#0 TTANCANACCNACCCCCACCTTCCNNTACACCACCACCACGNCAACANGCACAACACCAA 790 consensus_3693#2 TAAATGTATCTTTTTCGTTATAAGATTATATAAAAATTATGAAAATATATTGATGTTTAT 775 consensus_3693#1 ------------------------------------------------------------ consensus_3693#0 ACACCNC 797 consensus_3693#2 ATTT--- 779 consensus_3693#1 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Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||