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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3732#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 835 fasta sequence
[GCGGTTATNTGTGCGCTTCAAGAACGGCCCCGGGACTCNTTGCAGATCGAAGCGTTCGAGTGGATCGGCGACGACGATCTCTAAAGCCGGCTCGCCACCCAGAAGCACAGTGACATATTTGATATCGAATTTACTCTTTACCTGAGACACACGCGGTGTTGTGTGCGCGCTGCATGCGTGACATGTGAGAGCTTCAGCGCCTCCTCCTTTCGGTTCCTCCGGTNTNAATGTCGTATAATCGTGCTCGTAGTTGTATGTAATACGGGTTTCAGGATATATGTACGATGGTGGTGAATAGATAAATCTATCCCTTCCATTTTGCTGAAGCTCTTTATTCCTGCATGGTNTTCGCTTACATATCTGTAANATCAAATTNGCAGAAGCAATACCGGCGGGCACTAAATTACAATAACAAGTGGTGTNAATATTGTAAGTAACAAGTTGGGATCATGTCTCTCTTAANCCAAAATCGTATTAGAACNCAGGGTCATCGATTCCGCNNATTATANCACGGTGTGAACACGAAAGGTTCTCANCATTCTCGCGCTGCCTATCATGTATGTATACGTTATATCTACNGGGCACGTGCATACCACGACAAAGGGCTTACATGCACACANGGTGGAACCCCTCAGGTACCATCCTCCCTNAACACCGCANNCGTACTTCTCACGTAGTTCTCGTGGTACACCCAATGAAGTAAGNAGGCCCGCGCCGNGCGCAACAACATGCGGCCACTAAAACAANGGCACACACACGGGACCCCTTGCGATTGGCCGACATANANCAGCCCCCACGCAANAGNCTGCTACGAAATTCGATCATTGCTTCNTCA]
[+] EMBL AL693039 [GCGGTTATNTGTGCGCTTCAAGAACGGCCCCGGGACTCNTTGCAGATCGAAGCGTTCGAGTGGATCGGCGACGACGATCTCTAAAGCCGGCTCGCCACCCAGAAGCACAGTGACATATTTGATATCGAATTTACTCTTTACCTGAGACACACGCGGTGTTGTGTGCGCGCTGCATGCGTGACATGTGAGAGCTTCAGCGCCTCCTCCTTTCGGTTCCTCCGGTNTNAATGTCGTATAATCGTGCTCGTAGTTGTATGTAATACGGGTTTCAGGATATATGTACGATGGTGGTGAATAGATAAATCTATCCCTTCCATTTTGCTGAAGCTCTTTATTCCTGCATGGTNTTCGCTTACATATCTGTAANATCAAATTNGCAGAAGCAATACCGGCGGGCACTAAATTACAATAACAAGTGGTGTNAATATTGTAAGTAACAAGTTGGGATCATGTCTCTCTTAANCCAAAATCGTATTAGAACNCAGGGTCATCGATTCCGCNNATTATANCACGGTGTGAACACGAAAGGTTCTCANCATTCTCGCGCTGCCTATCATGTATGTATACGTTATATCTACNGGGCACGTGCATACCACGACAAAGGGCTTACATGCACACANGGTGGAACCCCTCAGGTACCATCCTCCCTNAACACCGCANNCGTACTTCTCACGTAGTTCTCGTGGTACACCCAATGAAGTAAGNAGGCCCGCGCCGNGCGCAACAACATGCGGCCACTAAAACAANGGCACACACACGGGACCCCTTGCGATTGGCCGACATANANCAGCCCCCACGCAANAGNCTGCTACGAAATTCGATCATTGCTTCNTCA]
consensusID : consensus_3732#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 705 fasta sequence
[CCGGCACCACTCTCCTACATTCGGCGGGATGGATCGAACCACTGCATTACCGACTCTAGTTCAACCGATACTCTCTGCAATCTAGTAAATAATGATAGTAGTAGCAACAACGGAACATCGACGCAACAACACTCCACAAACAACGGGTCTTCCTTTATCCGGCGCAAGCTGAAGGAGTTCAACACGACGGTGCGCTTCAAGAACGGCAAGGACTCGGTGCAGAACGAAGCGTTCGAGTGGATCGGCGACGACGATCTCTAGAAGCCGGCTCGCCACCCAGAAAGCACAGTGACATTTTGATATCGAATTTACTCTTTACCGAGACACACGCGGTGCTGTGTGCGCGCTGCTGCGTGACAGTGAGAGCTTAAGCGCCTCCCTCCTTTCGGTTCCTCCGGTTTTGTT--TTGTAACTCGTGCTCGTAGTAGTATGTAATACGGTTTAGGATATATGGAAGATGGTGGTGATTAGATAATCTATCCTTCCATTTTGCTGGACCTCTTTTTTCCTGCATGGTTTCGCTTACATTCTGTTTTCAAATTGCGAAGCAATACTGGCGACCACTAAATTACATTAACAAGTGGTGTTAATTTGTAGTAACAAGTTGGATCATGTCTCTTTTTCCAAATCGTTTAGAAAAGGGTTTTGATTCGCAATTATTAGGTGTGAAACGAAAAGGTTCTCACCATTCTCGCGCTGCCTATCA]
[+] EMBL BM605742 [CCGGCACCACTCTCCTACATTCGGCGGGATGGATCGAACCACTGCATTACCGACTCTAGTTCAACCGATACTCTCTGCAATCTAGTAAATAATGATAGTAGTAGCAACAACGGAACATCGACGCAACAACACTCCACAAACAACGGGTCTTCCTTTATCCGGCGCAAGCTGAAGGAGTTCAACACGACGGTGCGCTTCAAGAACGGCAAGGACTCGGTGCAGAACGAAGCGTTCGAGTGGATCGGCGACGACGATCTCTAGAAGCCGGCTCGCCACCCAGAAAGCACAGTGACATTTTGATATCGAATTTACTCTTTACCGAGACACACGCGGTGCTGTGTGCGCGCTGCTGCGTGACAGTGAGAGCTTAAGCGCCTCCCTCCTTTCGGTTCCTCCGGTTTTGTT TTGTAACTCGTGCTCGTAGTAGTATGTAATACGGTTTAGGATATATGGAAGATGGTGGTGATTAGATAATCTATCCTTCCATTTTGCTGGACCTCTTTTTTCCTGCATGGTTTCGCTTACATTCTGTTTTCAAATTGCGAAGCAATACTGGCGACCACTAAATTACATTAACAAGTGGTGTTAATTTGTAGTAA ]
[+] EMBL BX628084 [ GCTTCAAGAACGGCAAGGACTCGGTGCAGAACGAAGCGTTCGAGTGGATCGGCGACGACGATCTCTAGAAGCCGGCTCGCCACCCAG AAGCACAGTGACATTTTGATATCGAATTTACTCTTTACCGAGACACACGCGGTGTTGTGTGCGCGCTGCTGCGTGACTGTGAGAGCTTCAGCGCCT CCTCCTTTCGGTTCCTCCGGTTTTTTTTGTTGTTAATCGTGCTCGTAGTTGTATGTAATACGGTTTAGGATATAT GTAGATGGTGGTGAATAGATAATCTATCCTTCCATTTTGCTGAACCTCTTTTTTCCTGCATGGTTTCGCTTACATTCTGTTTTCAAATTGCGAAGCAATACCGGCGGCCACTAAATTACAATAACAAGTGGTGTTAATTTGTAGTAACAAGTTGGATCATGTCTCTTTTTCCAAATCGTTTAGAAAAGGGTTTTGATTCGCAATTATTAGGTGTGAAACGAAAAGGTTCTCACCATTCTCGCGCTGCCTATCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_3732#0 ------------------------------------------------------------
consensus_3732#1 CCGGCACCACTCTCCTACATTCGGCGGGATGGATCGAACCACTGCATTACCGACTCTAGT 60
consensus_3732#0 ------------------------------------------------------------
consensus_3732#1 TCAACCGATACTCTCTGCAATCTAGTAAATAATGATAGTAGTAGCAACAACGGAACATCG 120
consensus_3732#0 ----------------------------------------------------------GC 2
consensus_3732#1 ACGCAACAACACTCCACAAACAACGGGTCTTCCTTTATCCGGCGCAAGCTGAAGGAGTTC 180
*
consensus_3732#0 GGT-TATNTGTGCGCTTCAAGAACGGCCCCGGGACTCNTTGCAGATCGAAGCGTTCGAGT 61
consensus_3732#1 AACACGACGGTGCGCTTCAAGAACGGCA--AGGACTCGGTGCAGAACGAAGCGTTCGAGT 238
****************** ****** ****** **************
consensus_3732#0 GGATCGGCGACGACGATCTCTA-AAGCCGGCTCGCCACCCAGAA-GCACAGTGACATATT 119
consensus_3732#1 GGATCGGCGACGACGATCTCTAGAAGCCGGCTCGCCACCCAGAAAGCACAGTGACAT-TT 297
********************** ********************* ************ **
consensus_3732#0 TGATATCGAATTTACTCTTTACCTGAGACACACGCGGTGTTGTGTGCGCGCTGCATGCGT 179
consensus_3732#1 TGATATCGAATTTACTCTTTACC-GAGACACACGCGGTGCTGTGTGCGCGCTGC-TGCGT 355
*********************** *************** ************** *****
consensus_3732#0 GACATGTGAGAGCTTCAGCGCCTCC-TCCTTTCGGTTCCTCCGGTNTNAATGTCGTATAA 238
consensus_3732#1 GACA-GTGAGAGCTTAAGCGCCTCCCTCCTTTCGGTTCCTCCGGTTTTG-TTTTGTA-AC 412
**** ********** ********* ******************* * * * *** *
consensus_3732#0 TCGTGCTCGTAGTTGTATGTAATACGGGTTTCAGGATATATGTACGATGGTGGTGAATAG 298
consensus_3732#1 TCGTGCTCGTAGTAGTATGTAATACGG--TTTAGGATATATGGAAGATGGTGGTGATTAG 470
************* ************* ** ********** * *********** ***
consensus_3732#0 ATAAATCTATCCCTTCCATTTTGCTGAAGCTCTTTATTCCTGCATGGTNTTCGCTTACAT 358
consensus_3732#1 ATAA-TCTATCC-TTCCATTTTGCTGGACCTCTTTTTTCCTGCATGGTTT-CGCTTACAT 527
**** ******* ************* * ****** ************ * *********
consensus_3732#0 ATCTGTAANATCAAATTNGCAGAAGCAATACCGGCGGGCACTAAATTACAATAACAAGTG 418
consensus_3732#1 -TCTGT--TTTCAAATTGC--GAAGCAATACTGGCGACCACTAAATTACATTAACAAGTG 582
***** ******* ********** **** ************ *********
consensus_3732#0 GTGTNAATATTGTAAGTAACAAGTTGGGATCATGTCTCTCTTAANCCAAAATCGTATTAG 478
consensus_3732#1 GTGTTAAT-TTGTA-GTAACAAGTTGG-ATCATGTCTCTTT---TTCCAAATCGT-TTAG 635
**** *** ***** ************ *********** * * ******* ****
consensus_3732#0 AACNCAGGGTCATCGATTCCGCNNATTATANCACGGTGTGAACACGAAAGGTTCTCANCA 538
consensus_3732#1 AA---AAGGGTTTTGATTCG--CAATTATTA---GGTGTGAAACGAAAAGGTTCTCACCA 687
** * ** * ***** ***** ******** *********** **
consensus_3732#0 TTCTCGCGCTGCCTATCATGTATGTATACGTTATATCTACNGGGCACGTGCATACCACGA 598
consensus_3732#1 TTCTCGCGCTGCCTATCA------------------------------------------ 705
******************
consensus_3732#0 CAAAGGGCTTACATGCACACANGGTGGAACCCCTCAGGTACCATCCTCCCTNAACACCGC 658
consensus_3732#1 ------------------------------------------------------------
consensus_3732#0 ANNCGTACTTCTCACGTAGTTCTCGTGGTACACCCAATGAAGTAAGNAGGCCCGCGCCGN 718
consensus_3732#1 ------------------------------------------------------------
consensus_3732#0 GCGCAACAACATGCGGCCACTAAAACAANGGCACACACACGGGACCCCTTGCGATTGGCC 778
consensus_3732#1 ------------------------------------------------------------
consensus_3732#0 GACATANANCAGCCCCCACGCAANAGNCTGCTACGAAATTCGATCATTGCTTCNTCA 835
consensus_3732#1 ---------------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||