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Anopheles gambiae
cluster # 3762 cluster # 3762       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3762#0 length = 1111 sequences # 2  
consensus_3762#1 length = 920 sequences # 1  

consensusID : consensus_3762#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1111
fasta sequence
                              [GCGAGCAAGCATTTGGTGTACCGGACGGGAGCGAACCAACACCGGACGGGCGGGATGGGCAAGCAGCTGAGCCGGTTGCTGTACCAGGAGCGCGAACCAATCGATCCGATGGTGTTGCTTCGCGGCCAGGAGCTACGGCGGCACATCGAGCGGGCTCGGTTTCGCTGCCGGCTGCTGGAGCAGGAACGCGACCGGATGTGCGGTGGAATGCAGCAGCTGCGCAATCGGCTGAATGCGGCCTGTGATAGCAACATTGAGCGAGAGTCGGCACTGATGGAGCGCTATCGGACGTACGGGCGGGAGAAGGAGCAGCTGTACCAACAGAAGGGCTTACGCTAGCCAGAAGGACAGCGTGCGTGAGGTATGCGCAAAGATGCTAATGGTGCGCCATCAGTTGCTAAAGGGGCTGAACGAAATTTATTACATTAAATCGACGAGTCAGGGCATCTACACCATTAACTATGTACCATTGCCGAATGCGGAATCGTACACGGACGCAACGCCAGCACTGGCCCTCAGCGTTGCTCTTGGCTTCGTTGCCCACGCTGTGATGATGTGTTCCTCGTTTTTAGATATTCCCTTACGAAATCCCATTAAGTATGACGGTTCCCGTTCGAAGATAGTGGACCAAATTAAGCTACTACCAACGATGGATCGAGACTTTCCCCTGCACTGTCGCTCGGGACCAGCGCCGAACGCGCTGCTGTATGGGGTGTACCTGTTGAATCAGAACATTTCCCAGCTCAAGCATCAGCTCTCGCTGAGCCGGGGCGACCCGCGGGCCACGCTCGTTAATCTGCAGGACATTCTCACCATCCCCGGCATCGGCGGGCCGCTGCAGAAGCGTGATCTTGAGGAAGCGTTCCAAATGCTACCCTCGTCCGTGTTCGGGGCGTCATCGCCCGGGTTTATTTCGCTGTCGACTGCCGGTGGGAGCAGTAGCGGTAGCAGCAGTAGTGGATCGTTCCTTCGTGACAGCCCCTCTAGTAATAGAATTTCCCGCTCGGTTGATAACTACACGGACCGAAGGCAGCAGATGCAAAGGCACTACCAGCTTAATAGACATCCGTTGCAGCAGGCAAAAAGGCTGTCGAGCAGCAGCAGCAGTGCC]

[+] EMBL BX609285             [GCGAGCAAGCATTTGGTGTACCGGACGGGAGCGAACCAACACCGGACGGGCGGGATGGGCAAGCAGCTGAGCCGGTTGCTGTACCAGGAGCGCGAACCAATCGATCCGATGGTGTTGCTTCGCGGCCAGGAGCTACGGCGGCACATCGAGCGGGCTCGGTTTCGCTGCCGGCTGCTGGAGCAGGAACGCGACCGGATGTGCGGTGGAATGCAGCAGCTGCGCAATCGGCTGAATGCGGCCTGTGATAGCAACATTGAGCGAGAGTCGGCACTGATGGAGCGCTATCGGACGTACGGGCGGGAGAAGGAGCAGCTGTACCAACAGAAGGGCTTACGCTAGCCAGAAGGACAGCGTGCGTGAGGTATGCGCAAAGATGCTAATGGTGCGCCATCAGTTGCTAAAGGGGCTGAACGAAATTTATTACATTAAATCGACGAGTCAGGGCATCTACACCATTAACTATGTACCATTGCCGAATGCGGAATCGTACACGGACGCAACGCCAGCACTGGCCCTCAGCGTTGCTCTTGGCTTCGTTGCCCACGCTGTGATGATGTGTTCCTCGTTTTTAGATATTCCCTTACGAAATCCCATTAAGTATGACGGTTCCCGTTCGAAGATAGTGGACCAAATTAAGCTACTACCAACGATGGATCGAGACTTTCCCCTGCACTGTCGCTCGGGACCAGCGCCGAACGCGCTGCTGTATGGGGTGTACCTGTTGAATCAGAACATTTCCCAGCTCAAGCATCAGC                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BX612674             [                                                                                                                                                                                                                                                                                                                                           TACGCTAGCCAGAAGGACAGCGTTCGTGAGGTATGCGCAAAGATGCTAATGGTGCGCCATCAGTTGCTAAAGGGGCTGAACGAAATTTATTACATTAAATCGACGAGTCAGGGCATCTACACCATTAACGATGTACCATTGCCGAATGCGGAATCGTACACGGACGCAACGCCAGCACTGGCCCTCAGCGTTGCTCTTGGCTTCGTTGCCCACGCTGTGATGATGTGTTCCTCGTTTTTAGATATTCCCTTACGAAATCCCATTAAGTATGACGGTTCCCGTTCGAAGATAGTGGACCAAATTAAGCTACTACCAACGATGGATCGAGACTTTCCCCTGCACTGTCGCTCGGGACCAGCGCCGAACGCGCTGCTGTATGGGGTGTACCTGTTGAATCAGAACATTTCCCAGCTCAAGCATCAGCTCTCGCTGAGCCGGGGCGACCCGCGGGCCACGCTCGTTAATCTGCAGGACATTCTCACCATCCCCGGCATCGGCGGGCCGCTGCAGAAGCGTGATCTTGAGGAAGCGTTCCAAATGCTACCCTCGTCCGTGTTCGGGGCGTCATCGCCCGGGTTTATTTCGCTGTCGACTGCCGGTGGGAGCAGTAGCGGTAGCAGCAGTAGTGGATCGTTCCTTCGTGACAGCCCCTCTAGTAATAGAATTTCCCGCTCGGTTGATAACTACACGGACCGAAGGCAGCAGATGCAAAGGCACTACCAGCTTAATAGACATCCGTTGCAGCAGGCAAAAAGGCTGTCGAGCAGCAGCAGCAGTGCC]


>consensus_3762#0 GCGAGCAAGCATTTGGTGTACCGGACGGGAGCGAACCAACACCGGACGGGCGGGATGGGC AAGCAGCTGAGCCGGTTGCTGTACCAGGAGCGCGAACCAATCGATCCGATGGTGTTGCTT CGCGGCCAGGAGCTACGGCGGCACATCGAGCGGGCTCGGTTTCGCTGCCGGCTGCTGGAG CAGGAACGCGACCGGATGTGCGGTGGAATGCAGCAGCTGCGCAATCGGCTGAATGCGGCC TGTGATAGCAACATTGAGCGAGAGTCGGCACTGATGGAGCGCTATCGGACGTACGGGCGG GAGAAGGAGCAGCTGTACCAACAGAAGGGCTTACGCTAGCCAGAAGGACAGCGTGCGTGA GGTATGCGCAAAGATGCTAATGGTGCGCCATCAGTTGCTAAAGGGGCTGAACGAAATTTA TTACATTAAATCGACGAGTCAGGGCATCTACACCATTAACTATGTACCATTGCCGAATGC GGAATCGTACACGGACGCAACGCCAGCACTGGCCCTCAGCGTTGCTCTTGGCTTCGTTGC CCACGCTGTGATGATGTGTTCCTCGTTTTTAGATATTCCCTTACGAAATCCCATTAAGTA TGACGGTTCCCGTTCGAAGATAGTGGACCAAATTAAGCTACTACCAACGATGGATCGAGA CTTTCCCCTGCACTGTCGCTCGGGACCAGCGCCGAACGCGCTGCTGTATGGGGTGTACCT GTTGAATCAGAACATTTCCCAGCTCAAGCATCAGCTCTCGCTGAGCCGGGGCGACCCGCG GGCCACGCTCGTTAATCTGCAGGACATTCTCACCATCCCCGGCATCGGCGGGCCGCTGCA GAAGCGTGATCTTGAGGAAGCGTTCCAAATGCTACCCTCGTCCGTGTTCGGGGCGTCATC GCCCGGGTTTATTTCGCTGTCGACTGCCGGTGGGAGCAGTAGCGGTAGCAGCAGTAGTGG ATCGTTCCTTCGTGACAGCCCCTCTAGTAATAGAATTTCCCGCTCGGTTGATAACTACAC GGACCGAAGGCAGCAGATGCAAAGGCACTACCAGCTTAATAGACATCCGTTGCAGCAGGC AAAAAGGCTGTCGAGCAGCAGCAGCAGTGCC



consensusID : consensus_3762#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 920
fasta sequence
                              [TGCAAGAATCNCCACGAGGTGCCATCAGTTGCTAAATGGGGCTGAACGAAATTTATTACATTAAATCTGACGAGTCAGTGGCATCTACACCATTAACTGATGTACCATTGCCTGAATGCGTGAATCTGTACACGGACTGCAACTGCCAGCACTGGCCCTCAGCTGTTGCTCTTGTGCTTCTGTTGCCCACGCTGTGATGATGTGTTCCTCGTTTTTAGATATTCCCTTACGAAATCCCATTAAGTATGACTGGTTCCCGTTCGAAGATAGTGGACAAATTTAAGCTAATACAACTGAATTGGATCGAGACTTTCCCCTTGCACTGNCGCTCGGGGACAGATGGCCGAACATGCCGCCTGCTGTATGGGGGTGTAACCTGGTTGGAAATCNACGAACACATTTACCCCAGGTTCAATNCGCAATTCAAATACCTTCNTCCTCCTATTAAANCACGAATATTAAGTAAACCCCCNNCAANATAGTACACCAACAGTCAACACCAATATAAATCANTTTTCAAAACTCANAAANANATTAACTACTAAACAAAAATCACCCCACAACAACATATANAAGNAANAAANACCACCCTTGTCAAAACAAAAACAAATATAACACACAATTNGNAAAANTAGGATAAAAAACANGATGTTAACCACACAAAAAACTGTTGCGATAAAAACACCACACATCAGAAAAAACCNNAGATANNTAAAAANCAACGANGTNAAGGAATAACAAANAGCANAAAANACCANGAAANAAAAANNAAAAAAAATACAGCAAGANAAGATAAAGCAACNAAAAAAAANANANAAAGAAAGAGAAGAAAAANAACAAANAAAAAACAAAGAAAAAAAAAAAAAAAAAAAAGAAAAAAAGAAGACAGANAAAAAAAAAAAATATACCAAGAAAANAAA]

[+] EMBL AL693474             [TGCAAGAATCNCCACGAGGTGCCATCAGTTGCTAAATGGGGCTGAACGAAATTTATTACATTAAATCTGACGAGTCAGTGGCATCTACACCATTAACTGATGTACCATTGCCTGAATGCGTGAATCTGTACACGGACTGCAACTGCCAGCACTGGCCCTCAGCTGTTGCTCTTGTGCTTCTGTTGCCCACGCTGTGATGATGTGTTCCTCGTTTTTAGATATTCCCTTACGAAATCCCATTAAGTATGACTGGTTCCCGTTCGAAGATAGTGGACAAATTTAAGCTAATACAACTGAATTGGATCGAGACTTTCCCCTTGCACTGNCGCTCGGGGACAGATGGCCGAACATGCCGCCTGCTGTATGGGGGTGTAACCTGGTTGGAAATCNACGAACACATTTACCCCAGGTTCAATNCGCAATTCAAATACCTTCNTCCTCCTATTAAANCACGAATATTAAGTAAACCCCCNNCAANATAGTACACCAACAGTCAACACCAATATAAATCANTTTTCAAAACTCANAAANANATTAACTACTAAACAAAAATCACCCCACAACAACATATANAAGNAANAAANACCACCCTTGTCAAAACAAAAACAAATATAACACACAATTNGNAAAANTAGGATAAAAAACANGATGTTAACCACACAAAAAACTGTTGCGATAAAAACACCACACATCAGAAAAAACCNNAGATANNTAAAAANCAACGANGTNAAGGAATAACAAANAGCANAAAANACCANGAAANAAAAANNAAAAAAAATACAGCAAGANAAGATAAAGCAACNAAAAAAAANANANAAAGAAAGAGAAGAAAAANAACAAANAAAAAACAAAGAAAAAAAAAAAAAAAAAAAAGAAAAAAAGAAGACAGANAAAAAAAAAAAATATACCAAGAAAANAAA]


>consensus_3762#1 TGCAAGAATCNCCACGAGGTGCCATCAGTTGCTAAATGGGGCTGAACGAAATTTATTACA TTAAATCTGACGAGTCAGTGGCATCTACACCATTAACTGATGTACCATTGCCTGAATGCG TGAATCTGTACACGGACTGCAACTGCCAGCACTGGCCCTCAGCTGTTGCTCTTGTGCTTC TGTTGCCCACGCTGTGATGATGTGTTCCTCGTTTTTAGATATTCCCTTACGAAATCCCAT TAAGTATGACTGGTTCCCGTTCGAAGATAGTGGACAAATTTAAGCTAATACAACTGAATT GGATCGAGACTTTCCCCTTGCACTGNCGCTCGGGGACAGATGGCCGAACATGCCGCCTGC TGTATGGGGGTGTAACCTGGTTGGAAATCNACGAACACATTTACCCCAGGTTCAATNCGC AATTCAAATACCTTCNTCCTCCTATTAAANCACGAATATTAAGTAAACCCCCNNCAANAT AGTACACCAACAGTCAACACCAATATAAATCANTTTTCAAAACTCANAAANANATTAACT ACTAAACAAAAATCACCCCACAACAACATATANAAGNAANAAANACCACCCTTGTCAAAA CAAAAACAAATATAACACACAATTNGNAAAANTAGGATAAAAAACANGATGTTAACCACA CAAAAAACTGTTGCGATAAAAACACCACACATCAGAAAAAACCNNAGATANNTAAAAANC AACGANGTNAAGGAATAACAAANAGCANAAAANACCANGAAANAAAAANNAAAAAAAATA CAGCAAGANAAGATAAAGCAACNAAAAAAAANANANAAAGAAAGAGAAGAAAAANAACAA ANAAAAAACAAAGAAAAAAAAAAAAAAAAAAAAGAAAAAAAGAAGACAGANAAAAAAAAA AAATATACCAAGAAAANAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_3762#0      GCGAGCAAGCATTTGGTGTACCGGACGGGAGCGAACCAACACCGGACGGGCGGGATGGGC 60
consensus_3762#1      ------------------------------------------------------------
                                                                                  

consensus_3762#0      AAGCAGCTGAGCCGGTTGCTGTACCAGGAGCGCGAACCAATCGATCCGATGGTGTTGCTT 120
consensus_3762#1      ------------------------------------------------------------
                                                                                  

consensus_3762#0      CGCGGCCAGGAGCTACGGCGGCACATCGAGCGGGCTCGGTTTCGCTGCCGGCTGCTGGAG 180
consensus_3762#1      ------------------------------------------------------------
                                                                                  

consensus_3762#0      CAGGAACGCGACCGGATGTGCGGTGGAATGCAGCAGCTGCGCAATCGGCTGAATGCGGCC 240
consensus_3762#1      ------------------------------------------------------------
                                                                                  

consensus_3762#0      TGTGATAGCAACATTGAGCGAGAGTCGGCACTGATGGAGCGCTATCGGACGTACGGGCGG 300
consensus_3762#1      ------------------------------------------------------------
                                                                                  

consensus_3762#0      GAGAAGGAGCAGCTGTACCAACAGAAGGGCTTACGCTAGCCAGAAGGACAGCGTGCGTGA 360
consensus_3762#1      ------------------------------------------------------------
                                                                                  

consensus_3762#0      GGTATGCGCAAAGATGCTAATGGTGCGCCATCAGTTGCTAAA-GGGGCTGAACGAAATTT 419
consensus_3762#1      ------TGCAAGAATCNCCACGAGGTGCCATCAGTTGCTAAATGGGGCTGAACGAAATTT 54
                             ****  **    * *  * **************** *****************

consensus_3762#0      ATTACATTAAATC-GACGAGTCAG-GGCATCTACACCATTAACT-ATGTACCATTGCC-G 475
consensus_3762#1      ATTACATTAAATCTGACGAGTCAGTGGCATCTACACCATTAACTGATGTACCATTGCCTG 114
                      ************* ********** ******************* ************* *

consensus_3762#0      AATGCG-GAATC-GTACACGGAC-GCAAC-GCCAGCACTGGCCCTCAGC-GTTGCTCTTG 530
consensus_3762#1      AATGCGTGAATCTGTACACGGACTGCAACTGCCAGCACTGGCCCTCAGCTGTTGCTCTTG 174
                      ****** ***** ********** ***** ******************* **********

consensus_3762#0      -GCTTC-GTTGCCCACGCTGTGATGATGTGTTCCTCGTTTTTAGATATTCCCTTACGAAA 588
consensus_3762#1      TGCTTCTGTTGCCCACGCTGTGATGATGTGTTCCTCGTTTTTAGATATTCCCTTACGAAA 234
                       ***** *****************************************************

consensus_3762#0      TCCCATTAAGTATGAC-GGTTCCCGTTCGAAGATAGTGGACCAAATTAAGCTACTACCAA 647
consensus_3762#1      TCCCATTAAGTATGACTGGTTCCCGTTCGAAGATAGTGGACAAATTTAAGCTAATACAAC 294
                      **************** ************************ ** ******** *** * 

consensus_3762#0      CGA--TGGATCGAGACTTTCCCCT-GCACTGTCGCTCGGGACCAGC--GCCGAACGCGC- 701
consensus_3762#1      TGAATTGGATCGAGACTTTCCCCTTGCACTGNCGCTCGGGGACAGATGGCCGAACATGCC 354
                       **  ******************* ****** ********  ***   *******  ** 

consensus_3762#0      ---TGCTGTATGGGG-TGTACCT--GTTG------AATCAGAACATTT--CCCAGCTCAA 747
consensus_3762#1      GCCTGCTGTATGGGGGTGTAACCTGGTTGGAAATCNACGAACACATTTACCCCAGGTTCA 414
                         ************ **** *   ****       *  *  ******  ***** *  *

consensus_3762#0      GCATCAGCTCTCGCTGAGCCGGGGCGACCCGCGGGCCACGCTCGTTAA--------TCTG 799
consensus_3762#1      ATNCGCAATTCAAATACCTTCNTCCTCCTATTAAANCACGAATATTAAGTAAACCCCCNN 474
                              *     *         *  *        ****    ****         *  

consensus_3762#0      CAGGACATTCTCACCATCCCCGGCATCGGCG--GGCCGCTG--CAGAAGCGTGATCTTGA 855
consensus_3762#1      CAANATAGTACACCAACAGTCAACACCAATATAAATCANTTTTCAAAACTCANAAANANA 534
                      **  * * *    * *    *  ** *         *  *   ** **     *     *

consensus_3762#0      GGAAGCGTTC--CAAATGCTACCCT-CGTC--CGTGTTCGGGGCGT---CATCGCCCGGG 907
consensus_3762#1      TTAACTACTAAACAAAAATCACCCCACAACAACATATANAAGNAANAAANACCACCCTTG 594
                        **    *   ****    ****  *  *  * * *    *        * * ***  *

consensus_3762#0      TTTATTTCGCTGTCGACTGCCGGTGGGAGCAGTAGCGGTAGCAGCAGTAGTGGATCGTT- 966
consensus_3762#1      TCAAAACAAAAACAAATATAACACACAATTNGNAAAANTAGGATAAAAAACANGATGTTA 654
                      *  *           *           *   * *    *** *  *  *       *** 

consensus_3762#0      -CCTTCGTGACAGCCCCTCTAGTAATAGAATTTCCCGCTCGGTTGATAACTACACGGACC 1025
consensus_3762#1      ACCACACAAAAAACTGTTGCGATAAAAACACCACACATCAGAAAAAACCNNAGATANNTA 714
                       **      * * *   *    *** *  *   * *    *    *     * *      

consensus_3762#0      GAAGGCAGCAGATGCAAAGGCACTACCAGCTTAATAGACATCCGTTGCAGCAGGCAAAAA 1085
consensus_3762#1      AAAANCAAC-GANGTNAAGGAATAACAAANAGCANAAAANACCANGAAANAAAAANNAAA 773
                       **  ** * ** *  **** *  ** *     * * *   **     *  *     ***

consensus_3762#0      GGCTGTCGAGCAGCAGCAG-CAGTGCC--------------------------------- 1111
consensus_3762#1      AAAAATACAGCAAGANAAGATAAAGCAACNAAAAAAAANANANAAAGAAAGAGAAGAAAA 833
                           *  ****  *  **  *  **                                  

consensus_3762#0      ------------------------------------------------------------
consensus_3762#1      ANAACAAANAAAAAACAAAGAAAAAAAAAAAAAAAAAAAAGAAAAAAAGAAGACAGANAA 893
                                                                                  

consensus_3762#0      ---------------------------
consensus_3762#1      AAAAAAAAAATATACCAAGAAAANAAA 920
                                                 




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)