These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_414#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 252 fasta sequence [CCGCACAGTCCGTCCTTTTGTTGTTATTTTTTATTGTTTTTTATTCTTTATTTTATTTTTTTTTCGTTTTCGTTTTTGTTCTGTGGTGGNTCTCAACGATACATGATTTATTCCTAATGCTTCACAAGTAAATTCCCACACAAATGCCGTGACGGGGTACCGGGCGGGAAGGCCACACTTCCAAGCGGTCCCGACACCCTCCTTTAGCGGTAGAATGTTCATAACGCGCGGCGAAGTTACCGCCACCACCAC] [+] EMBL BX466857 [CCGCACAGTCCGTCCTTTTGTTGTTATTTTTTATTGTTTTTTATTCTTTATTTTATTTTTTTTTCGTTTTCGTTTTTGTTCTGTGGTGGNTCTCAACGATACATGATTTATTCCTAATGCTTCACAAGTAAATTCCCACACAAATGCCGTGACGGGGTACCGGGCGGGAAGGCCACACTTCCAAGCGGTCCCGACACCCTCCTTTAGCGGTAGAATGTTCATAACGCGCGGCGAAGTTACCGCCACCACCAC] consensusID : consensus_414#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 213 fasta sequence [ATCAGAGGCCTCTGCACCTGGGAGAGTGACTCCCGATCAGAAACTACCTCTTTGCTGCCAGTGCACTCCTCACCGCCCTGGTCACGGTCCACTGCCCATTCGCCACGATCCACTCCTCCTCAACCATCCACAACGACCGGGTGAACTACAACTCCCGCCCCGATCACACCCACTACCGCCAACTGGAACCAGGAACTGGGCAACGGTGACTAA] [+] EMBL BX605292 [ATCAGAGGCCTCTGCACCTGGGAGAGTGACTCCCGATCAGAAACTACCTCTTTGCTGCCAGTGCACTCCTCACCGCCCTGGTCACGGTCCACTGCCCATTCGCCACGATCCACTCCTCCTCAACCATCCACAACGACCGGGTGAACTACAACTCCCGCCCCGATCACACCCACTACCGCCAACTGGAACCAGGAACTGGGCAACGGTGACTAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_414#0 CCGCACAGTCCGTCCTTTTGTTGTTATTTTTTATTGTTTTTTATTCTTTATTTTATTTTT 60 consensus_414#1 -------ATCAGAGGCCTCTGCACCTGGGAGAGTGACTCCCGATCAGAAACTACCTCTTT 53 ** * * * * ** * * * *** consensus_414#0 TTTTCGTTTTCGTTTTTGTTCTGTGGTGGNTCTCAACGATACATGATTTATTCCTAATGC 120 consensus_414#1 GCTGCCAGTGCACTCCT-CACCGCCCTGGTC----ACGGTCCACTGCCCATTCGCCACGA 108 * * * * * * * * *** *** * ** **** * * consensus_414#0 TTCACAAGTAAATTCCCACACAAATGCCGTGACGGGGTACCGGGCGGGAAGGCCACACTT 180 consensus_414#1 TCCACTCCT----CCTCAACCATCCACAACGACCGGGT---GAACTACAA--CTCCCGCC 159 * *** * * ** ** * *** **** * * ** * * consensus_414#0 CCAAGCGGTCCCGACACCCTCCTTTAGCGGTAGAATGTTCATAACGCGCGGCGAAGTTAC 240 consensus_414#1 CCGATCACACCCACTACCGCCAACTGGAACCAGGAACTGGGCAACG-GTGACTAA----- 213 ** * * *** *** * * * ** * * **** * * * ** consensus_414#0 CGCCACCACCAC 252 consensus_414#1 ------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||