These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_440#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 251 fasta sequence [CCGCCCACGCGTCCGGGCGCTGAAAACAGTACGCTCGCTTCAATCTCAACTCACCCAACCAGAAGGTTTTGGTTCGTTGACGGACATCTTCATCGAAACGAAGGAACAGATGTGTGCAAACAGTGGAACAATAAAGTGTTAAATTGTGCGCTTGTGGAGAAGAGGTAAATGTGAAGCCGTTCTTCGCTCTGTAACAACCCGAGTGCGCTGTACGGGTGAAGTGGGCAACCATTTTTTAACTGGGTGACAGA] [+] EMBL BM579481 [CCGCCCACGCGTCCGGGCGCTGAAAACAGTACGCTCGCTTCAATCTCAACTCACCCAACCAGAAGGTTTTGGTTCGTTGACGGACATCTTCATCGAAACGAAGGAACAGATGTGTGCAAACAGTGGAACAATAAAGTGTTAAATTGTGCGCTTGTGGAGAAGAGGTAAATGTGAAGCCGTTCTTCGCTCTGTAACAACCCGAGTGCGCTGTACGGGTGAAGTGGGCAACCATTTTTTAACTGGGTGACAGA] consensusID : consensus_440#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 240 fasta sequence [CCGCCCACGCGTCCGGGAGGGTCGTGAAATGAATAAACATTCATTCGCTTTATTTAAATAGTTTTGTTTCATCGCGTATTCGCTTACAACCTTTGCTGCACTGCGGGCGCTGAAAACAGTACGCTCGCTTCAATCTCAACTCACCCAACCAGAAGGTTTTGGTTCGTTGACGGACATCTTCATCCAAACGAAGGAACAGATGTGTGCAAACAGTGGAACAATAAAGTGTTAAATTGTGCG] [+] EMBL BM654089 [CCGCCCACGCGTCCGGGAGGGTCGTGAAATGAATAAACATTCATTCGCTTTATTTAAATAGTTTTGTTTCATCGCGTATTCGCTTACAACCTTTGCTGCACTGCGGGCGCTGAAAACAGTACGCTCGCTTCAATCTCAACTCACCCAACCAGAAGGTTTTGGTTCGTTGACGGACATCTTCATCCAAACGAAGGAACAGATGTGTGCAAACAGTGGAACAATAAAGTGTTAAATTGTGCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_440#0 ------------------------------------------------------------ consensus_440#1 CCGCCCACGCGTCCGGGAGGGTCGTGAAATGAATAAACATTCATTCGCTTTATTTAAATA 60 consensus_440#0 -----------------------------CCGCCCACGCGTC-CGGGCGCTGAAAACAGT 30 consensus_440#1 GTTTTGTTTCATCGCGTATTCGCTTACAACCTTTGCTGCACTGCGGGCGCTGAAAACAGT 120 ** ** ***************** consensus_440#0 ACGCTCGCTTCAATCTCAACTCACCCAACCAGAAGGTTTTGGTTCGTTGACGGACATCTT 90 consensus_440#1 ACGCTCGCTTCAATCTCAACTCACCCAACCAGAAGGTTTTGGTTCGTTGACGGACATCTT 180 ************************************************************ consensus_440#0 CATCGAAACGAAGGAACAGATGTGTGCAAACAGTGGAACAATAAAGTGTTAAATTGTGCG 150 consensus_440#1 CATCCAAACGAAGGAACAGATGTGTGCAAACAGTGGAACAATAAAGTGTTAAATTGTGCG 240 **** ******************************************************* consensus_440#0 CTTGTGGAGAAGAGGTAAATGTGAAGCCGTTCTTCGCTCTGTAACAACCCGAGTGCGCTG 210 consensus_440#1 ------------------------------------------------------------ consensus_440#0 TACGGGTGAAGTGGGCAACCATTTTTTAACTGGGTGACAGA 251 consensus_440#1 ----------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||