These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_450#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 472 fasta sequence [CCGCCCACGCGTCCGCAGGATGAAGCGTTGCACGTGGGGAGGAGTGAACCACCAACACCGCAACAACGCGCCTGCCATTGTTTCCCCCCCCCCCCCCCCGCAATGCATTGTACAGACCACACTGCAAGTGTGCATGTAGTGAGGCTGATGTGTGACACACACACAACTTTCCAGCTGACACAATTAGAGGAAGAAAAAACAAACCATTTAAGCAAAACAAACACACTCGTGATCATCCTCCTCCTCCCTTTATGATAGTAAAAGTATGCAGCACATTCGACGCATAACGATCAACACCAGAACCCACACAGACACACATAGACACACACACACACACACACTCTATCAATTATGGAACAATTATTACGTTTGCTACAAGCATATTAAACGATTTAATGTAACTTTTTTTACAACGGTAATAGCAGCAGGTAAAAGATGGTACGCTAGTGGTCTTAGGTATAAAAATATATAA] [+] EMBL BM634281 [CCGCCCACGCGTCCGCAGGATGAAGCGTTGCACGTGGGGAGGAGTGAACCACCAACACCGCAACAACGCGCCTGCCATTGTTTCCCCCCCCCCCCCCCCGCAATGCATTGTACAGACCACACTGCAAGTGTGCATGTAGTGAGGCTGATGTGTGACACACACACAACTTTCCAGCTGACACAATTAGAGGAAGAAAAAACAAACCATTTAAGCAAAACAAACACACTCGTGATCATCCTCCTCCTCCCTTTATGATAGTAAAAGTATGCAGCACATTCGACGCATAACGATCAACACCAGAACCCACACAGACACACATAGACACACACACACACACACACTCTATCAATTATGGAACAATTATTACGTTTGCTACAAGCATATTAAACGATTTAATGTAACTTTTTTTACAACGGTAATAGCAGCAGGTAAAAGATGGTACGCTAGTGGTCTTAGGTATAAAAATATATAA] consensusID : consensus_450#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 191 fasta sequence [CCGATTAAAACTAGCTAAAAACTTGTGCGTTTATTGCAATTTTTTATTATTTTTGGGACGCACGGGTGGTGCGTGCAGCAAACGGGATGCTGTTGCCCCAAAAAGTGTGTGTTTGTGTGTCTATGTGTGTCTGTGTGGGTTCTGGTGTTGATCGTTATGCGTCGAATGTGCTGCATACTTTTACTATCATA] [+] EMBL BM624188 [CCGATTAAAACTAGCTAAAAACTTGTGCGTTTATTGCAATTTTTTATTATTTTTGGGACGCACGGGTGGTGCGTGCAGCAAACGGGATGCTGTTGCCCCAAAAAGTGTGTGTTTGTGTGTCTATGTGTGTCTGTGTGGGTTCTGGTGTTGATCGTTATGCGTCGAATGTGCTGCATACTTTTACTATCATA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_450#0 CCGCCCACGCGTCCGCAGGATGAAGCGTTGCACGTGGGGAGGAGTGAACCACCAACACCG 60 consensus_450#1 ------------------------------------------------------------ consensus_450#0 CAACAACGCGCCTGCCATTGTTTCCCCCCCCCCCCCCCCGCAATGCATTGTACAGACCAC 120 consensus_450#1 ------------------------------------------------------------ consensus_450#0 ACTGCAAGTGTGCATGTAGTGAGGCTGATGTGTGACACACACACAACTTTCCAGCTGACA 180 consensus_450#1 ------------------------------------------------------------ consensus_450#0 CAATTAGAGGAAGAAAAAACAAACCATTTAAGCAAAACAAACACACTCGTGATCATCCTC 240 consensus_450#1 ----------------------CCGATTAAAACTAGCTAAAAACTTGTGCGTTTATTGCA 38 * *** ** * * *** ** * * * ** consensus_450#0 CTCCTCCCTTTATGATAGTAAAAGTATGCAGCACATTCGACGCATAACGATCAACACCAG 300 consensus_450#1 ATTTTTTATTATTTTTGGGACGCACGGGTGGTGCGTGCAGCA---AACGG--GATGCTGT 93 * * ** * * * * * * * * * * **** * * consensus_450#0 AACCCACACAGACACACATAGACACACACACACACACACACTCTATCAATTATGGAAC-A 359 consensus_450#1 TGCCCCAAAAAGTGTGTGTTTGTGTGTCTATGTGTGT---CTGTGTGGGTTCTGGTGTTG 150 *** * * * * ** * * ** *** consensus_450#0 ATTATTACGTTTGCTACAAGCATATTAAACGATTTAATGTAACTTTTTTTACAACGGTAA 419 consensus_450#1 ATCGTTATGCGT----CGAATGTGCTGCATACTTTTAC-TATCATA-------------- 191 ** *** * * * * * * * *** * ** * * consensus_450#0 TAGCAGCAGGTAAAAGATGGTACGCTAGTGGTCTTAGGTATAAAAATATATAA 472 consensus_450#1 ----------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||