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Anopheles gambiae
cluster # 4722 cluster # 4722       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4722#0 length = 1048 sequences # 2  
consensus_4722#1 length = 650 sequences # 1  

consensusID : consensus_4722#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1048
fasta sequence
                              [ACGCCTGGGGTGCCAACAGCCATGCCCAGCTGGGACTGGGCTACGCGACGGAACTATGTGAATCCCCGCAACCATTGACCGGTGTGCCGTTTCGTGCCGGCGATATAGAATGTGTCGCTGCCGGTGGTGGCCATACGCTTGTAGCGACGGTCGATGGAAGATTGTATGCTTGCGGATGGAACAACCGAGGCCAGCTTGGTTTGGGACACGTGAATCACTGTGTCCGGTTCGAGCCCGTCGGTGAGTTCGGGTTCAAGCGGCTGTACGCAGGATGGGACTCATCGGCAGGGATAAGCGCATCCGGAGACCTGTACGTATGGGGATCGAATGTGTGGCAGCAGATAGGAGAAGCAGGGGTTAAAAGTATCCCAACACCCACACGGATTGAGCTACCGGAAGGTGGACCTGTAGCGAAAGTCACCTTCGGTTTACAGTACATGGCGGTGCTGATGGAGAGCGGAAAGGTTTGGGTGTTGGGAAAATAAGCTCCGTTCGTGATGTGGTTAGTGGAGATAATCATTTGGTGCTGCTAACTGGCGACCGTCGGATCGAATGCCTTGGCGACAATAAACACGGCCAATGGCTAGCTGACAATAGCATATTGGAAGACGTTACAAAGCTTGAATCTGGATGGACCCACTCGGGATGTCTGACCGTGAATGGGACCGTGCATCTGTGGGGAAGAAAAAATTACGGACAGCTTGGACGACCGGCCCCGACTGCTAGTTCCTCAGCTCCACAAAAGCTTCAACTAGAAACAGAACAAATGGAGCTGAACGATTTTAGTTTGGGATCCCAGCACGGTGTAGCACTGACACGCGATGGACGTGTGTACTGTTGGGGCTGGAACGAGCATGGCAACTGTGGCACGGGAAGCACAGCGAATGTATTGGTTCCTACCCCGATAGACATCCCCGTGCCGGTGAGGAAGGTGATCTGCGGTGCTGGTTATACGATGGCATTCACCTTAAACACACATCATTCTTCTCGCAATGCAATCGTTTCCATCACCCACCAGTGCCATCGACCCATTTATTAACGGGCTGAA]

[+] EMBL CNS08O9I             [ACGCCTGGGGTGCCAACAGCCATGCCCAGCTGGGACTGGGCTACGCGACGGAACTATGTGAATCCCCGCAACCATTGACCGGTGTGCCGTTTCGTGCCGGCGATATAGAATGTGTCGCTGCCGGTGGTGGCCATACGCTTGTAGCGACGGTCGATGGAAGATTGTATGCTTGCGGATGGAACAACCGAGGCCAGCTTGGTTTGGGACACGTGAATCACTGTGTCCGGTTCGAGCCCGTCGGTGAGTTCGGGTTCAAGCGGCTGTACGCAGGATGGGACTCATCGGCAGGGATAAGCGCATCCGGAGACCTGTACGTATGGGGATCGAATGTGTGGCAGCAGATAGGAGAAGCAGGGGTTAAAAGTATCCCAACACCCACACGGATTGAGCTACCGGAAGGTGGACCTGTAGCGAAAGTCACCTTCGGTTTACAGTACATGGCGGTGCTGATGGAGAGCGGAAAGGTTTGGGTGTTGGGAAAATAAGCTCCGTTCGTGATGTGGTTAGTGGAGATAATCATTTGGTGCTGCTAACTGGCGACCGTCGGATCGAATGCCTTGGCGACAATAAACACGGCCAATGGCTAGCTGACAATAGCATATTGGAAGACGTTACAAAGCTTGAATCTGGATGGACCCACTCGGGATGTCTGACCGTGAATGGGACCGTGCATCTGTGGGGAAGAAAAAATTACGGACAGCTTGGACGACCGGCCCCGACTGCTAGTTCCTCAGCTCCACAAAAGCTTCAACTAGAAACAGAACAAATGGAGCTGAACGATTTTAGTTTGGGATCCCAGCACGGTGTAGCACTGACACGCGATGGACGTGTGTACTGT                                                                                                                                                                                                                  ]
[-] EMBL CNS08O9J             [                                                                                                                                                                                                                                                                                            GCAGGGATAAGCGCATCCGGAGACCTGTACGTATGGGGATCGAATGTGTGGCAGCAGATAGGAGAAGCAGGGGTTAAAAGTATCCCAACACCCACACGGATTGAGCTACCGGTTTGTGGACCTGTAGCGAAAGTTTACTTCGGTTTACAGTACATGGCGGTGCTGATGGAGAGCGGAAAGGTTTGGGTGTTGGGAAAATAAGCTCCGTTCGTGATGTGGTTAGTGGAGATAATCATTTGGTGCTGCTTACTGGCGACCGTCGGATCGAATGCCTTGGCGACAATAAACACGGCCAATGGCTAGCTGACAATAGCATATTGGAAGACGTTACAAAGCTTGAATCTGGATGGACCCACTCGGGATGTCTGACCGTGAATGGGACCGTGCATCTGTGGGGAAGAAACAATTACGGACAGCTTGGACGACCGGCCCCGACTGCTAGTTCCTCAGCTCCACAAAAGCTTCAACTAGAAACAGAACAAATGGAGCTGAACGATTTTAGTTTGGGATCCCAGCACGGTGTAGCACTGACACGCGATGGACGTGTGTACTGTTGGGGCTGGAACGAGCATGGCAACTGTGGCACGGGAAGCACAGCGAATGTATTGGTTCCTACCCCGATAGACATCCCCGTGCCGGTGAGGAAGGTGATCTGCGGTGCTGGTTATACGATGGCATTCACCTTAAACACACATCATTCTTCTCGCAATGCAATCGTTTCCATCACCCACCAGTGCCATCGACCCATTTATTAACGGGCTGAA]


>consensus_4722#0 ACGCCTGGGGTGCCAACAGCCATGCCCAGCTGGGACTGGGCTACGCGACGGAACTATGTG AATCCCCGCAACCATTGACCGGTGTGCCGTTTCGTGCCGGCGATATAGAATGTGTCGCTG CCGGTGGTGGCCATACGCTTGTAGCGACGGTCGATGGAAGATTGTATGCTTGCGGATGGA ACAACCGAGGCCAGCTTGGTTTGGGACACGTGAATCACTGTGTCCGGTTCGAGCCCGTCG GTGAGTTCGGGTTCAAGCGGCTGTACGCAGGATGGGACTCATCGGCAGGGATAAGCGCAT CCGGAGACCTGTACGTATGGGGATCGAATGTGTGGCAGCAGATAGGAGAAGCAGGGGTTA AAAGTATCCCAACACCCACACGGATTGAGCTACCGGAAGGTGGACCTGTAGCGAAAGTCA CCTTCGGTTTACAGTACATGGCGGTGCTGATGGAGAGCGGAAAGGTTTGGGTGTTGGGAA AATAAGCTCCGTTCGTGATGTGGTTAGTGGAGATAATCATTTGGTGCTGCTAACTGGCGA CCGTCGGATCGAATGCCTTGGCGACAATAAACACGGCCAATGGCTAGCTGACAATAGCAT ATTGGAAGACGTTACAAAGCTTGAATCTGGATGGACCCACTCGGGATGTCTGACCGTGAA TGGGACCGTGCATCTGTGGGGAAGAAAAAATTACGGACAGCTTGGACGACCGGCCCCGAC TGCTAGTTCCTCAGCTCCACAAAAGCTTCAACTAGAAACAGAACAAATGGAGCTGAACGA TTTTAGTTTGGGATCCCAGCACGGTGTAGCACTGACACGCGATGGACGTGTGTACTGTTG GGGCTGGAACGAGCATGGCAACTGTGGCACGGGAAGCACAGCGAATGTATTGGTTCCTAC CCCGATAGACATCCCCGTGCCGGTGAGGAAGGTGATCTGCGGTGCTGGTTATACGATGGC ATTCACCTTAAACACACATCATTCTTCTCGCAATGCAATCGTTTCCATCACCCACCAGTG CCATCGACCCATTTATTAACGGGCTGAA



consensusID : consensus_4722#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 650
fasta sequence
                              [CCGCAGCCATGCCCAGCTGGGACTGGGCTACGCGACGGAGCAATGTGAATCCCCGCAACCATTGACCGATGTGCCGTTTCGTGCCGGCGATATAGAATGTGTCGCTGCCGGTGGTGGCCATACGCTTGTAGCGACGGTCGACGGGAGATTGTATGCTTGCGGATGGAACAACCGAGGCCAGCTTGGTTTGGGACACGCGAATGACTGTGTTCGGTTCGAGTCCGTCGGTGAGTTCGGGTTCAAGCGGCTGTACGCAGGATGGGACACATCGGCAGGGATAAGCGCATCCGGAGACCTGTACGTATGGGGATCGAATGTGTGGCAGCAGATAGGACAAGCAGGGGTTAAAAGTATCCCAACACCCACACGGATTGAGCTACCGGAAGGTGGACCTGTAGCGAAAGTAACTTTCGGTTTACAGATACATGGCGGTGCTGATGGAGAAGCGGAGAAGGTTTGGGTGTTGGGAAAATGTAAATTCCTAGCCGATTACCCGCTGGAAGTTGCATCGAAGCTAGCGATTCGATGTCTCTGGGATAGAAGCTCGGTCCGGGATGTGGTCAGTGGAGATAATCATTTGGTGCTGCTAGCCGGCGACCGTCGAATCGAATGCCTTGGCGACAACAAACATGGCCAATGGTTGGCGGGCA]

[+] EMBL BM579822             [CCGCAGCCATGCCCAGCTGGGACTGGGCTACGCGACGGAGCAATGTGAATCCCCGCAACCATTGACCGATGTGCCGTTTCGTGCCGGCGATATAGAATGTGTCGCTGCCGGTGGTGGCCATACGCTTGTAGCGACGGTCGACGGGAGATTGTATGCTTGCGGATGGAACAACCGAGGCCAGCTTGGTTTGGGACACGCGAATGACTGTGTTCGGTTCGAGTCCGTCGGTGAGTTCGGGTTCAAGCGGCTGTACGCAGGATGGGACACATCGGCAGGGATAAGCGCATCCGGAGACCTGTACGTATGGGGATCGAATGTGTGGCAGCAGATAGGACAAGCAGGGGTTAAAAGTATCCCAACACCCACACGGATTGAGCTACCGGAAGGTGGACCTGTAGCGAAAGTAACTTTCGGTTTACAGATACATGGCGGTGCTGATGGAGAAGCGGAGAAGGTTTGGGTGTTGGGAAAATGTAAATTCCTAGCCGATTACCCGCTGGAAGTTGCATCGAAGCTAGCGATTCGATGTCTCTGGGATAGAAGCTCGGTCCGGGATGTGGTCAGTGGAGATAATCATTTGGTGCTGCTAGCCGGCGACCGTCGAATCGAATGCCTTGGCGACAACAAACATGGCCAATGGTTGGCGGGCA]


>consensus_4722#1 CCGCAGCCATGCCCAGCTGGGACTGGGCTACGCGACGGAGCAATGTGAATCCCCGCAACC ATTGACCGATGTGCCGTTTCGTGCCGGCGATATAGAATGTGTCGCTGCCGGTGGTGGCCA TACGCTTGTAGCGACGGTCGACGGGAGATTGTATGCTTGCGGATGGAACAACCGAGGCCA GCTTGGTTTGGGACACGCGAATGACTGTGTTCGGTTCGAGTCCGTCGGTGAGTTCGGGTT CAAGCGGCTGTACGCAGGATGGGACACATCGGCAGGGATAAGCGCATCCGGAGACCTGTA CGTATGGGGATCGAATGTGTGGCAGCAGATAGGACAAGCAGGGGTTAAAAGTATCCCAAC ACCCACACGGATTGAGCTACCGGAAGGTGGACCTGTAGCGAAAGTAACTTTCGGTTTACA GATACATGGCGGTGCTGATGGAGAAGCGGAGAAGGTTTGGGTGTTGGGAAAATGTAAATT CCTAGCCGATTACCCGCTGGAAGTTGCATCGAAGCTAGCGATTCGATGTCTCTGGGATAG AAGCTCGGTCCGGGATGTGGTCAGTGGAGATAATCATTTGGTGCTGCTAGCCGGCGACCG TCGAATCGAATGCCTTGGCGACAACAAACATGGCCAATGGTTGGCGGGCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4722#0      ACGCCTGGGGTGCCAACAGCCATGCCCAGCTGGGACTGGGCTACGCGACGGAACTATGTG 60
consensus_4722#1      -------------CCGCAGCCATGCCCAGCTGGGACTGGGCTACGCGACGGAGCAATGTG 47
                                   *  ************************************ * *****

consensus_4722#0      AATCCCCGCAACCATTGACCGGTGTGCCGTTTCGTGCCGGCGATATAGAATGTGTCGCTG 120
consensus_4722#1      AATCCCCGCAACCATTGACCGATGTGCCGTTTCGTGCCGGCGATATAGAATGTGTCGCTG 107
                      ********************* **************************************

consensus_4722#0      CCGGTGGTGGCCATACGCTTGTAGCGACGGTCGATGGAAGATTGTATGCTTGCGGATGGA 180
consensus_4722#1      CCGGTGGTGGCCATACGCTTGTAGCGACGGTCGACGGGAGATTGTATGCTTGCGGATGGA 167
                      ********************************** ** **********************

consensus_4722#0      ACAACCGAGGCCAGCTTGGTTTGGGACACGTGAATCACTGTGTCCGGTTCGAGCCCGTCG 240
consensus_4722#1      ACAACCGAGGCCAGCTTGGTTTGGGACACGCGAATGACTGTGTTCGGTTCGAGTCCGTCG 227
                      ****************************** **** ******* ********* ******

consensus_4722#0      GTGAGTTCGGGTTCAAGCGGCTGTACGCAGGATGGGACTCATCGGCAGGGATAAGCGCAT 300
consensus_4722#1      GTGAGTTCGGGTTCAAGCGGCTGTACGCAGGATGGGACACATCGGCAGGGATAAGCGCAT 287
                      ************************************** *********************

consensus_4722#0      CCGGAGACCTGTACGTATGGGGATCGAATGTGTGGCAGCAGATAGGAGAAGCAGGGGTTA 360
consensus_4722#1      CCGGAGACCTGTACGTATGGGGATCGAATGTGTGGCAGCAGATAGGACAAGCAGGGGTTA 347
                      *********************************************** ************

consensus_4722#0      AAAGTATCCCAACACCCACACGGATTGAGCTACCGGAAGGTGGACCTGTAGCGAAAGTCA 420
consensus_4722#1      AAAGTATCCCAACACCCACACGGATTGAGCTACCGGAAGGTGGACCTGTAGCGAAAGTAA 407
                      ********************************************************** *

consensus_4722#0      CCTTCGGTTTACAG-TACATGGCGGTGCTGATGGAGA-GCGGA-AAGGTTTGGGTGTTGG 477
consensus_4722#1      CTTTCGGTTTACAGATACATGGCGGTGCTGATGGAGAAGCGGAGAAGGTTTGGGTGTTGG 467
                      * ************ ********************** ***** ****************

consensus_4722#0      GAAAATAAGCTCCGTTCGTGATGTGGTTAGTGGAGATAATCATTTGGTGCTGCTAACTGG 537
consensus_4722#1      GAAAATGTAAATTCCTAGCCGATTACCCGCTGGAAGTTG-CATCGAAGCTAGCGATTCGA 526
                      ******         * *     *      ****  *   ***        ** *   * 

consensus_4722#0      CGACCGTCGGATCGAATGCCTTGGCGACAATAAACACGGCCAATGGCTAGCTGACAATAG 597
consensus_4722#1      TGTCTCTGGGATAGAA-GCTCGGTCCGGGAT----GTGGTCAGTGG--AGATAATCATTT 579
                       * *  * **** *** **   * *    **      ** ** ***  ** * *  **  

consensus_4722#0      CATATTGGAAGACGTTACAAAGCTTGAATCTGGATGGACCCACTCGGGATGTCTGACCGT 657
consensus_4722#1      GGTGCTGCTAGCCG--GCGACCGTCGAATC-GAATG-----CCTTGG------CGACAAC 625
                        *  **  ** **   * *   * ***** * ***      ** **       ***   

consensus_4722#0      GAATGGGACCGTGCATCTGTGGGGAAGAAAAAATTACGGACAGCTTGGACGACCGGCCCC 717
consensus_4722#1      AAACATGGCCAATGGTTGGCGGGCA----------------------------------- 650
                       **   * **     *  * *** *                                   

consensus_4722#0      GACTGCTAGTTCCTCAGCTCCACAAAAGCTTCAACTAGAAACAGAACAAATGGAGCTGAA 777
consensus_4722#1      ------------------------------------------------------------
                                                                                  

consensus_4722#0      CGATTTTAGTTTGGGATCCCAGCACGGTGTAGCACTGACACGCGATGGACGTGTGTACTG 837
consensus_4722#1      ------------------------------------------------------------
                                                                                  

consensus_4722#0      TTGGGGCTGGAACGAGCATGGCAACTGTGGCACGGGAAGCACAGCGAATGTATTGGTTCC 897
consensus_4722#1      ------------------------------------------------------------
                                                                                  

consensus_4722#0      TACCCCGATAGACATCCCCGTGCCGGTGAGGAAGGTGATCTGCGGTGCTGGTTATACGAT 957
consensus_4722#1      ------------------------------------------------------------
                                                                                  

consensus_4722#0      GGCATTCACCTTAAACACACATCATTCTTCTCGCAATGCAATCGTTTCCATCACCCACCA 1017
consensus_4722#1      ------------------------------------------------------------
                                                                                  

consensus_4722#0      GTGCCATCGACCCATTTATTAACGGGCTGAA 1048
consensus_4722#1      -------------------------------
                                                     




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)