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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4737#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 971 fasta sequence
[ATCGCAACATCATCGCCTCACAGGCCTTACGGTAGCGTTTCAACATCGCTACAATTGTTGTGTTTGTTTGTTGGTGATCGAACCGGGGAAAGCAGATAAGCAAGAGTGCGTTTCCCCCTGACGGAATCGCCCTTCGGAAAGCGTTCAGCAGGGACGGACGGGTGCGCCAAGATTCACTTACAACCTGGTAGGAGGACACACGAAAACCCACAAATATGGAAGCGGTTGCAAAGCACGACTTTAACGCCACAGCGGATGATGAGCTGAGCTTCAGAAAGAGCCAGGTTTTAAAGATTTTAAATATGGAAGACGACATGAACTGGTACCGGGCGGAGCTAGACGGCAAGGAGGGACTGATACCTAGCAATTACATAGAAATGAAAAATCACGACTGGTACTACGGTCGCATCACACGGGCGGACGCGGAAAAGCTGCTATCGAACAAACACGAGGGCGCCTTTCTGATACGGATCAGTGAATCGAGCCCCGGCGACTTCAGCCTGTCGGTCAAGTGCTCCGACGGCGTGCAACACTTCAAGGTGCT-GCGCGACTCACAGGGCAAGTTCTTCCTCTGGGTGGTGAAGTTCAACTCGCTGAACGAGCTGGTCGACTACCACCGTACCGCTAGTGTGTCTCGATCGCAGGACGTTAAACTGCGTGATATGGTGCCAGAANAGATGTTGGTGCAGGCTTTGTACGACTTCGTAGCGCAAGAATCCGGCGAGCTGGACTTCCGACGAGGGGACNTCATCACGGTGACGGATCGTTCCGACGAGCACTGGTGGAACGGCNAGATCGGCAACCGGAAANGACTGTTTCCAGCAATATACGTAGCACCGTACCATTCATAAAACNTAAGTATTTTTACTCGCCTCTCCTCCCATACATACGCAGAGACATGCATACCAACCCCGTCACAGATGCACAGGCAACCCGTGTGCGCCNGAAAGCGCGAATANACCACACAATAG]
[+] EMBL BX622667 [ATCGCAACATCATCGCCTCACAGGCCTTACGGTAGCGTTTCAACATCGCTACAATTGTTGTGTTTGTTTGTTGGTGATCGAACCGGGGAAAGCAGATAAGCAAGAGTGCGTTTCCCCCTGACGGAATCGCCCTTCGGAAAGCGTTCAGCAGGGACGGACGGGTGCGCCAAGATTCACTTACAACCTGGTAGGAGGACACACGAAAACCCACAAATATGGAAGCGGTTGCAAAGCACGACTTTAACGCCACAGCGGATGATGAGCTGAGCTTCAGAAAGAGCCAGGTTTTAAAGATTTTAAATATGGAAGACGACATGAACTGGTACCGGGCGGAGCTAGACGGCAAGGAGGGACTGATACCTAGCAATTACATAGAAATGAAAAATCACGACTGGTACTACGGTCGCATCACACGGGCGGACGCGGAAAAGCTGCTATCGAACAAACACGAGGGCGCCTTTCTGATACGGATCAGTGAATCGAGCCCCGGCGACTTCAGCCTGTCGGTCAAGTGCTCCGACGGCGTGCAACACTTCAAGGTGCT GCGCGACTCACAGGGCAAGTTCTTCCTCTGGGTGGTGAAGTTCAACTCGCTGAACGAGCTGGTCGACTACCACCGTACCGCTAGTGTGTCTCGATCGCAGGACGTTAAACTGCGTGATATGGTGCCAGAANAGATGTTGGTGCAGGCTTTGTACGAC ]
[+] EMBL BX623809 [ GCTGCTATCGAACAAACACGAGGGCGCCTTTCTGATACGGATCAGTGAATCGAGCCCCGGCGACTTCAGCCTGNCGGTCAAGTGCTCCGACGGCGTGCAACANTTCAAGGTGCTGGCCNAACGCACAGGGCAAGTTCTTCCTCTGGGTGGTGAAGTTCAACTCGCTGAACGAGCTGGTCGACTACCACCGTACCGCTAGTGTGTCTCGATCGCAGGACGTTAAACTGCGTGATATGGTGCCAGAAGAGATGTTGGTGCAGGCTTTGTACGACTTCGTAGCGCAAGAATCCGGCGAGCTGGACTTCCGACGAGGGGACNTCATCACGGTGACGGATCGTTCCGACGAGCACTGGTGGAACGGCNAGATCGGCAACCGGAAANGACTGTTTCCAGCAATATACGTAGCACCGTACCATTCATAAAACNTAAGTATTTTTACTCGCCTCTCCTCCCATACATACGCAGAGACATGCATACCAACCCCGTCACAGATGCACAGGCAACCCGTGTGCGCCNGAAAGCGCGAATANACCACACAATAG]
consensusID : consensus_4737#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 586 fasta sequence
[AGAATCGCCCGAGGTTGCAAGCACGACTTTAACGCCACAGCGGATGATGAGCTGAGCTTCAGAAAGAGCCAGGTTTTAAAGATTTTAAATATGGAAGACGACATGAACTGGTACCGGGCGGAGCTAGACGGCAAGGAGGGACTGATACCTAGCAATTACATAGAAATGAAAAATCACGACTGGTACTACGGTCGCATCACACGGGCGGACGCGGAAAAGCTGCTATCGAACAAACACGAGGGCGCCTTTCTGATACGGATCAGTGAATACGAGCCCCGGCGACTTCAGCCTGTCGGTCAAGTGCTCCGACGGCTGTGCAACACTTCAAGGTGCTGCGCGACTCACAGGGCAAGTTCTTCCTCTGGGTGGTGAAGTTCAACTCGCTGAACGAGCTGGTCGACTACCACCGTACCGCTAGTGTGTCTCGATCGCAGGACGTTAAACTGCGTGATATGGTGCCAGAAGAGATGTTGGTGCAGGCTTTGTACGACTTCGTAGCGCAAGAATCCGGCGAGCTGGACTTCCGACGAGGGGACGTCATCACGGTGACGGATCGTCCGACGAGCACTGGTGGAACGGCGACGAT]
[+] EMBL AL931286 [AGAATCGCCCGAGGTTGCAAGCACGACTTTAACGCCACAGCGGATGATGAGCTGAGCTTCAGAAAGAGCCAGGTTTTAAAGATTTTAAATATGGAAGACGACATGAACTGGTACCGGGCGGAGCTAGACGGCAAGGAGGGACTGATACCTAGCAATTACATAGAAATGAAAAATCACGACTGGTACTACGGTCGCATCACACGGGCGGACGCGGAAAAGCTGCTATCGAACAAACACGAGGGCGCCTTTCTGATACGGATCAGTGAATACGAGCCCCGGCGACTTCAGCCTGTCGGTCAAGTGCTCCGACGGCTGTGCAACACTTCAAGGTGCTGCGCGACTCACAGGGCAAGTTCTTCCTCTGGGTGGTGAAGTTCAACTCGCTGAACGAGCTGGTCGACTACCACCGTACCGCTAGTGTGTCTCGATCGCAGGACGTTAAACTGCGTGATATGGTGCCAGAAGAGATGTTGGTGCAGGCTTTGTACGACTTCGTAGCGCAAGAATCCGGCGAGCTGGACTTCCGACGAGGGGACGTCATCACGGTGACGGATCGTCCGACGAGCACTGGTGGAACGGCGACGAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4737#0 ATCGCAACATCATCGCCTCACAGGCCTTACGGTAGCGTTTCAACATCGCTACAATTGTTG 60
consensus_4737#1 ------------------------------------------------------------
consensus_4737#0 TGTTTGTTTGTTGGTGATCGAACCGGGGAAAGCAGATAAGCAAGAGTGCGTTTCCCCCTG 120
consensus_4737#1 ------------------------------------------------------------
consensus_4737#0 ACGGAATCGCCCTTCGGAAAGCGTTCAGCAGGGACGGACGGGTGCGCCAAGATTCACTTA 180
consensus_4737#1 ------------------------------------------------------------
consensus_4737#0 CAACCTGGTAGGAGGACACACGAAAACCCACAAATATGGAAGCGGTTGCAAAGCACGACT 240
consensus_4737#1 -------------------------------AGAATCGCCCGAGGTTGCAA-GCACGACT 28
* * * * ******** ********
consensus_4737#0 TTAACGCCACAGCGGATGATGAGCTGAGCTTCAGAAAGAGCCAGGTTTTAAAGATTTTAA 300
consensus_4737#1 TTAACGCCACAGCGGATGATGAGCTGAGCTTCAGAAAGAGCCAGGTTTTAAAGATTTTAA 88
************************************************************
consensus_4737#0 ATATGGAAGACGACATGAACTGGTACCGGGCGGAGCTAGACGGCAAGGAGGGACTGATAC 360
consensus_4737#1 ATATGGAAGACGACATGAACTGGTACCGGGCGGAGCTAGACGGCAAGGAGGGACTGATAC 148
************************************************************
consensus_4737#0 CTAGCAATTACATAGAAATGAAAAATCACGACTGGTACTACGGTCGCATCACACGGGCGG 420
consensus_4737#1 CTAGCAATTACATAGAAATGAAAAATCACGACTGGTACTACGGTCGCATCACACGGGCGG 208
************************************************************
consensus_4737#0 ACGCGGAAAAGCTGCTATCGAACAAACACGAGGGCGCCTTTCTGATACGGATCAGTGAAT 480
consensus_4737#1 ACGCGGAAAAGCTGCTATCGAACAAACACGAGGGCGCCTTTCTGATACGGATCAGTGAAT 268
************************************************************
consensus_4737#0 -CGAGCCCCGGCGACTTCAGCCTGTCGGTCAAGTGCTCCGACGGC-GTGCAACACTTCAA 538
consensus_4737#1 ACGAGCCCCGGCGACTTCAGCCTGTCGGTCAAGTGCTCCGACGGCTGTGCAACACTTCAA 328
******************************************** **************
consensus_4737#0 GGTGCTGCGCGACTCACAGGGCAAGTTCTTCCTCTGGGTGGTGAAGTTCAACTCGCTGAA 598
consensus_4737#1 GGTGCTGCGCGACTCACAGGGCAAGTTCTTCCTCTGGGTGGTGAAGTTCAACTCGCTGAA 388
************************************************************
consensus_4737#0 CGAGCTGGTCGACTACCACCGTACCGCTAGTGTGTCTCGATCGCAGGACGTTAAACTGCG 658
consensus_4737#1 CGAGCTGGTCGACTACCACCGTACCGCTAGTGTGTCTCGATCGCAGGACGTTAAACTGCG 448
************************************************************
consensus_4737#0 TGATATGGTGCCAGAANAGATGTTGGTGCAGGCTTTGTACGACTTCGTAGCGCAAGAATC 718
consensus_4737#1 TGATATGGTGCCAGAAGAGATGTTGGTGCAGGCTTTGTACGACTTCGTAGCGCAAGAATC 508
**************** *******************************************
consensus_4737#0 CGGCGAGCTGGACTTCCGACGAGGGGACNTCATCACGGTGACGGATCGTTCCGACGAGCA 778
consensus_4737#1 CGGCGAGCTGGACTTCCGACGAGGGGACGTCATCACGGTGACGGATCGT-CCGACGAGCA 567
**************************** ******************** **********
consensus_4737#0 CTGGTGGAACGGCNA-GATCGGCAACCGGAAANGACTGTTTCCAGCAATATACGTAGCAC 837
consensus_4737#1 CTGGTGGAACGGCGACGAT----------------------------------------- 586
************* * ***
consensus_4737#0 CGTACCATTCATAAAACNTAAGTATTTTTACTCGCCTCTCCTCCCATACATACGCAGAGA 897
consensus_4737#1 ------------------------------------------------------------
consensus_4737#0 CATGCATACCAACCCCGTCACAGATGCACAGGCAACCCGTGTGCGCCNGAAAGCGCGAAT 957
consensus_4737#1 ------------------------------------------------------------
consensus_4737#0 ANACCACACAATAG 971
consensus_4737#1 --------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||