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Anopheles gambiae
cluster # 4851 cluster # 4851       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4851#0 length = 1059 sequences # 4  

consensusID : consensus_4851#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1059
fasta sequence
                              [TAAACGATCCGAGGAAACAACCAGCAGCATGAGTTCCCTCAAGCTTCAGAAGAGGCTGGCAGCCTCGGTTATGCGATGCGGCAAGAAGAAGGTGTGGTTGGATCCTAATGAAATCAACGAG-ATTGGAAACACCAACTCGCGACAAAACATTCGCAAACTGATCAAGGATGGTCTGATCATCAAGAAGCCGGTGGTGGTCCACTCGCGTTACCGTGTGCGCAAAAACACGATCGCTCGCCGCAAGGGTCGCCACTGCGGTTATGGTAAGCGAAAG-GGTACGGCCAATGCCCGTATGCCCCAGAAGCTGCTCTGGATGAACCGTATGCGTGTGCTGCGTCGTCTGCTGAAGAAGTACCGTGAGGCGAAGAAAATCGACCGTCACCTGTAC-CACGACCTGTACATGCGTGCGAAGGGTAACGTGTTCAAGAACAAGCGTATCCTGATCGAGCACATCCACAAGAAGAAGGCCCGCATGGTGACGGTGAAGGGCCCGCGCGGAAC-CTCGTCAAGAACTTCCGCCATCTGCCCATCGACGTCTACCGAGTGCACCGCAAGAAGGTGACGGTGGAGAAGTGGTTCGGCTCCAAGAAGGAGCTGGCTGCCGTCCGCACCGTCTGCTCGCACATCGAGAACATGATCAAGGGTGTCACCAAGGGATTCCAGTACAAGATGCGTGCTGTACATGCTCACTTCCCGATCAACTGCGTGATCAGTGAGAACAACACGCTGGTGGAGATCCGTAACTTCCTCGGCGAGAAGCACATCCGTCGCGTGAAGATGCAGCCGGGCGTGACCGTGGTGAACTCCGCCAAGCAGAAGGACGAGCTGGTGCTCGAGGGTAACGACATCGAAGCGGTCTCCCCGTCCGCCGCCCTCATCCAGCAGTCGACGACCGTCCACAACAAGGATATCCGTAAGTTCTTGGACGGTCTGTACGTTTCCGAGAAGACGACAGTTGGTACAGGACGAGGAATAAGTTGTAACATTGTTGTAAGCGAAAGTAAACGGAATGAAGCAGCAGCAGAAAACAAAGTGGGGTGGCCCGTGAGAGATGGATTA]

[+] EMBL CNS09NK7             [TAAACGATCCGAGGAAACAACCAGCAGCATGAGTTCCCTCAAGCTTCAGAAGAGGCTGGCAGCCTCGGTTATGCGATGCGGCAAGAAGAAGGTGTGGTTGGATCCTAATGAAATCAACGAG ATTGGAAACACCAACTCGCGACAAAACATTCGCAAACTGATCAAGGATGGTCTGATCATCAAGAAGCCGGTGGTGGTCCACTCGCGTTACCGTGTGCGCAAAAACACGATCGCTCGCCGCAAGGGTCGCCACTGCGGTTATGGTAAGCGAAAG GGTACGGCCAATGCCCGTATGCCCCAGAAGCTGCTCTGGATGAACCGTATGCGTGTGCTGCGTCGTCTGCTGAAGAAGTACCGTGAGGCGAAGAAAATCGACCGTCACCTGTAC CACGACCTGTACATGCGTGCGAAGGGTAACGTGTTCAAGAACAAGCGTATCCTGATCGAGCACATCCACAAGAAGAAGGCCCGCATGGTGACGGTGAAGGGCCCGCGCGGAAC CTCGTCAAGAACTTCCGCCATCTGCCCATCGACGTCTACCGAGTGCACCGCAAGAAGGTGACGGTGGAGAAGTGGTTCGGCTCCAAGAAGGAGCTGGCTGCCGTCCGCACCGTCTGCTCGCACATCGAGAACATGATCAAGGGTGTCACCAAGGGATTCCAGTACAAGATGCGTGCTGTACATGCTCACTTCCCGATCAACTGCGTGATCAGTGAGAACAACACGCTGGTGGAGATCCGTAACTTCCTCGGCGAGAAGCACATCCGTCGCGTGAAGATGCAGCCGGGCGTGACCGTGGTGAACTCCGCCAAGCAGAAGGACGAGCTGGTGCTCGAGGGTAACGACATCGAAGCGGTCTCCCCGTCCGCCGCCCTCATCCAGCAGTCGACGACCGTCCACAACAAGGATATCCGTAAGTTCTTGGACGGTCTGTACGTTTCCGAGAAGACGACAGTTGGTAC                                                                                                 ]
[+] EMBL CNS09BDB             [      ATCCGAGGAAACAACCAGCAGCATGAGTTCCCTCAAGCTTCAGAAGAGGCTGGCAGCCTCGGTTATGCGATGCGGCAAGAAGAAGGTGTGGTTGGATCCTAATGAAATCAACGAGAATTGGAAACACCAACTCGCGACAAAACATTCGCAAACTGATCAAGGATGGTCTGATCATCAAGAAGCCGGTGGTGGTCCACTCGCGTTACCGTGTGCGCAAAAACACGATCGCTCGCCGCAAGGGTCGCCACTGCGGTTATGGTAAGCGAAAGCGGTACGGCCAATGCCCGTATGCCCCAGAAGCTGCTCTGGATGAACCGTATGCGTGTGCTGCGTCGTCTGCTGAAGAAGTACCGTGAGGCGAAGAAAATCGACCGTCACCT TACTTTTGACCTGTACATGCGTGCGAAGGGTAACGTGTTCAAGAACAAGCGTATCCTGATCGAGCACATCCACAAGAAGAAGGCCCGCATGGTGACGGTGAAGGGCCCGCGCGGAAC CTCGTCAAGAACTTCCGCCATCTGCCCATCGACGTCTACCGAGTGCACCGCAAGAAGGTGACGGTGGAGAAGTGGTTCGGCTCCAAGAAGGAGCTGGCTGCCGTCCGCACCGTCTGCTCGCACATCGAGAACATGATCAAGGGTGTCACCAAGGGATTCCAGTACAAGATGCGTGCTGTACATGCTCACTTCCCGATCAACTGCGTGATCAGTGAGAACAACACGCTGGTGGAGATCCGTAACTTCCTCGGCGAGAAGCACATCCGTCGCGTGAAGATGCAGCCGGGCGTGACCGTGGTGAACTCCGCCAAGCAGAAGGACGAGCTGGTGCTCGAGGGTAACGACATCGAAGCGGTCTCCCTGTCCGCCGCCCTCATCCAGCAGTCGACGACCGTCCACAACAA                                                                                                                                                          ]
[-] EMBL CNS09NK8             [                                                                                                                                                     ATTCGCAAACTGATCAAGGATGGTCTGATCATCAAGAAGCCGGT GTTGTCCACTCGCGTTACCGTGTGCGCAAAAACACGATCGCTCGCCGCAAGGGTCGCCACTGCGGTTATGGTAAGCGAAAG GGTACGGCCAATGCCCGTATGCCCCAGAAGCTGCTCTGGATGAACCGTATGCGTGTGCTGCGTCGTCTGCTGAAGAAGTACCGTGAGGCGAAGAAAATCGACCGTCACCTGTAC CACGACCTGTACATGCGTGCGAAGGGTAACGTGTTCAAGAACAAGCGTATCCTGATCGAGCACATCCACAAGAAGAAGGCCCGCATGGTGACGGTGAAGGGCCCGCGCGGAACGCTCGTCAAGAACTTCCGCCATCTGCCCATCGACGTCTACCGAGTGCACCGCAAGAAGGTGACGGTGGAGAAGTGGTTCGGCTCCAAGAAGGAGCTGGCTGCCGTCCGCACCGTCTGCTCGCACATCGAGAACATGATCAAGGGTGTCACCAAGGGATTCCAGTACAAGATGCGTGCTGTACATGCTCACTTCCCGATCAACTGCGTGATCAGTGAGAACAACACGCTGGTGGAGATCCGTAACTTCCTCGGCGAGAAGCACATCCGTCGCGTGAAGATGCAGCCGGGCGTGACCGTGGTGAACTCCGCCAAGCAGAAGGACGAGCTGGTGCTCGAGGGTAACGACATCGAAGCGGTCTCCCCGTCCGCCGCCCTCATCCAGCAGTCGACGACCGTCCACAACAAGGATATCCGTAAGTTCTTGGACGGTCTGTACGTTTCCGAGAAGACGACAG TGGTACAGGACGAGGAATAAGTTGTAACATTGTTGTAAGCGAAAGTAAACGGAATGAAGCAGCAGCAGAAAACAAAGTGGGGTGGCCCGTGAGAGATGGATTA]
[+] EMBL CNS09GEX             [                                                                                                                                                                                                                                                                                        CGGCCAATGCCCGTATGCCCCAGAAGCTGCTCTGGATGAACCGTATGCGTGTGCTGCGTCGTCTGCTGAAGAAGTACCGTGA GCGAAGAAAATCGACCGTCACCTGTAC CACGACCTGTACATGCGTGCGAAGGGTAACGTGTTCAAGAACAAGCGTATCCTGATCGAGCACATCCACAAGAAGAAGGCCCGCATGGTGACGGTGAAGGGCCCGCGCGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]


>consensus_4851#0 TAAACGATCCGAGGAAACAACCAGCAGCATGAGTTCCCTCAAGCTTCAGAAGAGGCTGGC AGCCTCGGTTATGCGATGCGGCAAGAAGAAGGTGTGGTTGGATCCTAATGAAATCAACGA GATTGGAAACACCAACTCGCGACAAAACATTCGCAAACTGATCAAGGATGGTCTGATCAT CAAGAAGCCGGTGGTGGTCCACTCGCGTTACCGTGTGCGCAAAAACACGATCGCTCGCCG CAAGGGTCGCCACTGCGGTTATGGTAAGCGAAAGGGTACGGCCAATGCCCGTATGCCCCA GAAGCTGCTCTGGATGAACCGTATGCGTGTGCTGCGTCGTCTGCTGAAGAAGTACCGTGA GGCGAAGAAAATCGACCGTCACCTGTACCACGACCTGTACATGCGTGCGAAGGGTAACGT GTTCAAGAACAAGCGTATCCTGATCGAGCACATCCACAAGAAGAAGGCCCGCATGGTGAC GGTGAAGGGCCCGCGCGGAACCTCGTCAAGAACTTCCGCCATCTGCCCATCGACGTCTAC CGAGTGCACCGCAAGAAGGTGACGGTGGAGAAGTGGTTCGGCTCCAAGAAGGAGCTGGCT GCCGTCCGCACCGTCTGCTCGCACATCGAGAACATGATCAAGGGTGTCACCAAGGGATTC CAGTACAAGATGCGTGCTGTACATGCTCACTTCCCGATCAACTGCGTGATCAGTGAGAAC AACACGCTGGTGGAGATCCGTAACTTCCTCGGCGAGAAGCACATCCGTCGCGTGAAGATG CAGCCGGGCGTGACCGTGGTGAACTCCGCCAAGCAGAAGGACGAGCTGGTGCTCGAGGGT AACGACATCGAAGCGGTCTCCCCGTCCGCCGCCCTCATCCAGCAGTCGACGACCGTCCAC AACAAGGATATCCGTAAGTTCTTGGACGGTCTGTACGTTTCCGAGAAGACGACAGTTGGT ACAGGACGAGGAATAAGTTGTAACATTGTTGTAAGCGAAAGTAAACGGAATGAAGCAGCA GCAGAAAACAAAGTGGGGTGGCCCGTGAGAGATGGATTA



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)