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Anopheles gambiae
cluster # 5108 cluster # 5108       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5108#0 length = 1265 sequences # 4  

consensusID : consensus_5108#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1265
fasta sequence
                              [TTCTTTGTTTATTACTTTTTTTATTATTCTCGATTATCGAATCGTTGTCAAAACACGTGTAGAAAAAACCAACCGTGCGTGCGGTGCGCCCCCCATGCGAAAAAAATCGATGGCCAAAAAACGGGGGCCCAGTCTGGTCTGGTCGGAAGAAATGTAATTAGAAAATCGTGGCTAAAAAATTGGACCTAATCAGTTTAAAAACAACAAACAAACAAACAAAACATCTATCTAAGTATAATCAGCCGGTTGCGGGGGGAAGAAAACGGTTTCGTTAAAAAAAGAATAAGAATGAAGGCTTTCATCGTAGCATG-CCAAGATATTCCCTATTCA-GTCAGTGGTCGGGCAAGCAATCGGGGCAGTGGTGATGCTGATCGTGGTTCAGTTCGCTTTTCGCGATC-GTAGCCTA-CTCCGCTTCCGTCTACCGGAAGCTGATGATCGTACTGCCGATGCTTTTC-TCGCTGCAAATGTGTTCCAGCGCT-CGTTCCACTTCGTTCGGTGTGTAGACCCGATCGACGACCGTTTTGAGCGTTTCATCGTTCACGAAGCCGGCCAACCGTTCCAGCACGAAATGGCACAGGTGTGGGCCGCCCCAGTCGACGCTGGTGCGGAACAGCACCGCGGCCACCTTCCGGCACCGCACGTACGTCCCGAGAAAGAAGCGCCCGACCACCCGTAA-TCGTCGGTGGACTGTTCCGGCTCGACCGCGTCCAC-TATCACACCGTCTTTGGTAAGGAACTTTTCGAGAAACTTGTAATCGTACCCGAGCCGGGTGGTGAGAAAGATGT-AGTGGAACTTGGGCCGCGACGTCAGCTCGTTGATAAAGTT-GACTTTTCCACGTTCACGTCGATAAAGTTCGACCGGAAGTGCTCGTTGTCGAAGGTGATGATGTCCGCCGCACCGAGATTGTTGATCACCGGCACCGAGCGAGTGTGGCAGGTGGCCGTCACGTGGGCGCCCCACTTGTGCACCAGCTGCGTGATGACGCACCCGACCGGCGAGCAGGCGTCCTGCACCAGAATCTGCCGGCCCTTGCACGTGTGCTCGGTCAGGTGGTGCTCGTCGAGCAGGTTAAGCGCGATCGAACCACTGTACGGCAGGCTGGCCGCACCCTCGAACCCAATCAGAAACGGTTTGCGCGAGACGCGCGTTTCCGGCACGACCACAAACTCGGACGCCACGCCCGGCTCGTACCAGTGCGTCGCGAGCCACACCTCGTCCCCGATCTCTAGCCCGCTCTTCGAGCCGGGACCGACCGCTTCCACCGG]

[+] EMBL CNS08FTZ             [TTCTTTGTTTATTACTTTTTTTATTATTCTCGATTATCGAATCGTTGTCAAAACACGTGTAGAAAAAACCAACCGTGCGTGCGGTGCGCCCCCCATGCGAAAAAAATCGATGGCCAAAAAACGGGGGCCCAGTCTGGTCTGGTCGGAAGAAATGTAATTAGAAAATCGTGGCTAAAAAATTGGACCTAATCAGTTTAAAAACAACAAACAAACAAACAAAACATCTATCTAAGTATAATCAGCCGGTTGCGGGGGGAAGAAAACGGTTTCGTTAAAAAAAGAATAAGAATGAAGGCTTTCATCGTAGCATG CCAAGATATTCCCTATTCA GTCAGTGGTCGGGCAAGCAATCGGGGCAGTGGTGATGCTGATCGTGGTTCAGTTCGCTTTTCGCGATC GTAGCCTA CTCCGCTTCCGTCTACCGGAAGCTGATGATCGTACTGCCGATGCTTTTC TCGCTGCAAATGTGTTCCAGCGCT CGTTCCACTTCGTTCGGTGTGTAGACCCGATCGACGACCGTTTTGAGCGTTTCATCGTTCACGAAGCCGGCCAACCGTTCCAGCACGAAATGGCACAGGTGTGGGCCGCCCCAGTCGACGCTGGTGCGGAACAGCACCGCGGCCACCTTCCGGCACCGCACGTACGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL AL692986             [                                                                                                                                                                                                                                                                                         AAGAAGAATGAAGCCTTTCATCGTAGCATGCCCAAGATATTCCCTATTCAGGTCAGT GTCGGGCAAGCAATCGGGGCAGT GTGAT CTGATCGTGGTTCAGTTCGCTTTTCGCGATCTGTAGCCTACCTCCGCTTCCGTCTACCGGAAGCTGATGATCGTACT CCGATGCTTTTCGTCGCTGCAAATGTGTTCCAGCGCTGCGTTCCACTTCGTTCGGTGTGTAGACCCGATCGACGACCGTTTTAAGCGTCTCATCGTTCACGAAGCCGGCCAACCGTTCCAGCACGAAATGGCACAGGT T GGCC CCCCAGT GA  CTGGT CGGAACAGCACC C GCCACCTTCCGGCACCGCACGTACGTGCCGAGAAAGAAGCGCCCGACCACCCGTAA TCGTCGGTGGACTGTTCCGGCTCGACCGCGTCCAC TATCACACCGTCTTTGGTAAGGAACTTTTCGAGAAACTTGTAATCGTACCCGAGCCGGNTGGTGAGAAAGATGTAAGTGGAACTTGGACCGCGACGTCAGCTCGTTGATAAAGTT GACTTTTACACctcggggg                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL BM611153             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   gCCGTAATTCGTCGGTGGACTGTTCCGGCTCGACCGCGTCCACTTATCACACCGTCTTTGGTAAGGAACTTTTCGAGAAACTTGTAATCGTACCCGAGCCGGGTGGTGAGAAAGATGT AGTGGAACTTGGGCCGCGATGTCAGCTCGTTGATGAAGTTGGACTTTTCCACGTTCACGTCGATAAAGTTCGACCGGAAGTGCTCGTTGTCGAAGGTGATGATGTCCGCCGCACCGAGATTGTTGATCACCGGCACCGAGCGAGTGTGGCAGGTGGCCGTCACGTGGGCGCCCCACTTGTGCACCAGCTGCGTGATGACGCACCCGACCGGCGAGCAGGCGTCCTGCACCAGAATCTGCCGGCCCTTGCACGTGTGCTCGGTCAGGTGGTGCTCGTCGAGCAGGTTAAGCGCGATCGAACCACTGTACGGCAGGCTGGCCGCACCCTCGAACCCAATCAGAAACGGTTTGCGCGAGACGCGCGTTTCCGGCACGACCACAAACTCGGACGCCACGCCCGGCTCGTACCAGTGCGTCGCGAGCCACACCTCGTCCCCGATCTCTAGCCCGCTCTTCGAGCCGGGACCGACCGCTTCCACCGG]
[-] EMBL BM623289             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GTGGTGAGAAAGATGT AGTGGAACTTGGGCCGCGACGTCAGCTCGTTGATAAAGTTGGACTTTTCCACGTTCACGTCGATGAAGTTCGACCGGAAGTGCTCGTTGTCGAAGGTGATGATGTCCGCCGCACCGAGATTGTTGATCACCGGCACCGAGCGCGTGTGGCAGGTGGCCGTCACGTGGGCGCCCCACTTGTGCACCAGCTGCGTGATGACGCACCCGACCGGCGAGCAGGCGTCCTGCACCAGAATCTGCCGGCCCTTGCACGTGTGCTCGGTCAGGTGGTGCTCGTCGAGCAGGTTAAGCGCGATCGAACCgg                                                                                                                                                                                  ]


>consensus_5108#0 TTCTTTGTTTATTACTTTTTTTATTATTCTCGATTATCGAATCGTTGTCAAAACACGTGT AGAAAAAACCAACCGTGCGTGCGGTGCGCCCCCCATGCGAAAAAAATCGATGGCCAAAAA ACGGGGGCCCAGTCTGGTCTGGTCGGAAGAAATGTAATTAGAAAATCGTGGCTAAAAAAT TGGACCTAATCAGTTTAAAAACAACAAACAAACAAACAAAACATCTATCTAAGTATAATC AGCCGGTTGCGGGGGGAAGAAAACGGTTTCGTTAAAAAAAGAATAAGAATGAAGGCTTTC ATCGTAGCATGCCAAGATATTCCCTATTCAGTCAGTGGTCGGGCAAGCAATCGGGGCAGT GGTGATGCTGATCGTGGTTCAGTTCGCTTTTCGCGATCGTAGCCTACTCCGCTTCCGTCT ACCGGAAGCTGATGATCGTACTGCCGATGCTTTTCTCGCTGCAAATGTGTTCCAGCGCTC GTTCCACTTCGTTCGGTGTGTAGACCCGATCGACGACCGTTTTGAGCGTTTCATCGTTCA CGAAGCCGGCCAACCGTTCCAGCACGAAATGGCACAGGTGTGGGCCGCCCCAGTCGACGC TGGTGCGGAACAGCACCGCGGCCACCTTCCGGCACCGCACGTACGTCCCGAGAAAGAAGC GCCCGACCACCCGTAATCGTCGGTGGACTGTTCCGGCTCGACCGCGTCCACTATCACACC GTCTTTGGTAAGGAACTTTTCGAGAAACTTGTAATCGTACCCGAGCCGGGTGGTGAGAAA GATGTAGTGGAACTTGGGCCGCGACGTCAGCTCGTTGATAAAGTTGACTTTTCCACGTTC ACGTCGATAAAGTTCGACCGGAAGTGCTCGTTGTCGAAGGTGATGATGTCCGCCGCACCG AGATTGTTGATCACCGGCACCGAGCGAGTGTGGCAGGTGGCCGTCACGTGGGCGCCCCAC TTGTGCACCAGCTGCGTGATGACGCACCCGACCGGCGAGCAGGCGTCCTGCACCAGAATC TGCCGGCCCTTGCACGTGTGCTCGGTCAGGTGGTGCTCGTCGAGCAGGTTAAGCGCGATC GAACCACTGTACGGCAGGCTGGCCGCACCCTCGAACCCAATCAGAAACGGTTTGCGCGAG ACGCGCGTTTCCGGCACGACCACAAACTCGGACGCCACGCCCGGCTCGTACCAGTGCGTC GCGAGCCACACCTCGTCCCCGATCTCTAGCCCGCTCTTCGAGCCGGGACCGACCGCTTCC ACCGG



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)