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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5157#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 998 fasta sequence
[CCATACCCGTCGAGCGAACGCTGTCAATCCCAGTACTTTATTACTCCATCCCAGCCGGCCGTCACCAGCTTGCTTGCCTCGTGCGGATGCCACAGCGTTGCTATGCACACGTTATCGTGCGCCTGCCACTTCTTGTACAGCTTGGTCGTCTTCCAGTCCCATATGTAGCACTTGCCGTCGCCATCGCCCGACACCAGGTAGCTCATGTCGGGCGAAAAGTCCAGATTGCACGCGTACCCCGACACCATGTGGCCGGTGAACGTTTTCTTGCGATTCATCTTGAACCGATNGATCGCGGAAAAGATGACGATCTTGTTGTCGAGGCTCTGGCACGCCAGCCACTTGCCGTTCGGTGCGAGCGTTACCGCCGGCATCGAATGCATTGTCGGATCGGCAATGTACTTCATGTCCACCGGAATGTCCCACTCCCACACGCGCAAGCTCTTGTCGTCCGAGGTCGTCACGAAGCGTCGATTTTCGTCCACGAACGTGATCGTGTTGACCGCACCGAGATGGCGATCGTACTCCTGCACAACCTCACCGGTACGGGTGTCCCAGCAGATAATCTTCTTGTCCGACGTGCCGGCCACGAACAGGTGCTGCTTGTTAAAGTCCGGATGGAACTTGACGCAGAACGGGATCTTGCGCGAGTTGAACCGCGATATGACGTCGCCCGTTTCCGTGTCCCACAGCTTCAGGTACCGGTCGTACCCGGCCGAGATGAACCGTTCGCCCTTGTTATTGAAGCTGACATCCCGCACCGCCTGCCGATGGCCGGAGTACGTACGGACGCAGCGCCGCTCGTTGTACACCTCCCACAGCTTCACGCGTGCGTCCATGCTGCAAGAGAGCAGCAAATGAGCGGAAACAGGAAACCAGCGGATCGCCGATATGCCCTTCGTATGGCCGGTCCAGGTGTGAATGTGTGCCTTCGGCAGGAAACAACGATCCGGAGCACCCGCTTTGCGCAGATTAACTCCAACATCGTGCGGTGGGTG]
[+] EMBL CNS08GQ7 [CCATACCCGTCGAGCGAACGCTGTCAATCCCAGTACTTTATTACTCCATCCCAGCCGGCCGTCACCAGCTTGCTTGCCTCGTGCGGATGCCACAGCGTTGCTATGCACACGTTATCGTGCGCCTGCCACTTCTTGTACAGCTTGGTCGTCTTCCAGTCCCATATGTAGCACTTGCCGTCGCCATCGCCCGACACCAGGTAGCTCATGTCGGGCGAAAAGTCCAGATTGCACGCGTACCCCGACACCATGTGGCCGGTGAACGTTTTCTTGCGATTCATCTTGAACCGATTGATCGCGGAAAAGATGACGATCTTGTTGTCGAGGCTCTGGCACGCCAGCCACTTGCCGTTCGGTGCGAGCGTTACCGCCGGCATCGAATGCATCGTCGGATCGGCAATGTACTTCATGTCCACCGGAATGTCCCACTCCCACACGCGCAAGCTCTTGTCGTCCGAGGTCGTCACGAAGCGTCGATTTTCGTCCACGAACGTGATCGTGTTGACCACACCGAGATGGCGATCGTACTCCTGCACAACCTCGCCGGTGCGGGTGTCCCAACAGATAATCTTCTTGTCCGACGTGCCGGCCACGAACAGGTGCTGCTTGTTAAAGTCCGGATGGAACTTGACGCAGAACGGGATCTTGCGCGAATTGAACCGCGATATGACGTCGCCCGTTTCCGTATCCCACAGCTTCAGGTACCGGTCGTACCCGGCCGAGATGAACCGTTCGCCCTTGTTGTTGAAGCTGACATCCCGCACCGCCTGCCGATGGCCGGAGTACGTACGGACGCAGCGCCGCTCGTTGTACACCTCCCACAGCTTGACGCGT ]
[-] EMBL BX620564 [ AACGTTTTCTTGCGATTCATCTTGANCCGATNGATCGCGGAAAAGATGACGATCTTGTTGTCGAGGNTCTGGCACGCCAGCCACTTGCCGTTCGGTGCGAGCGTTACCGCCGGCATCGAATGCATTGTCGGATCGGCAATGTACTTCATGTCCACCGGAATGTCCCACTCCCACACGCGCAAGCTCTTGTCGTCCGAGGTCGTCACGAAGCGTCGATTTTCGTCCACGAACGTGATCGTGTTGACCGCACCGAGATGGCGATCGTACTCCTGCACAACCTCACCGGTACGGGTGTCCCAGCAGATAATCTTCTTGTCCGACGTGCCGGCCACGAACAGGTGCTGCTTGTTAAAGTCCGGATGGAACTTGACGCAGAACGGGATCTTGCGCGAGTTGAACCGCGATATGACGTCGCCCGTTTCCGTGTCCCACAGCTTCAGGTACCGGTCGTACCCGGCCGAGATGAACCGTTCGCCCTTGTTATTGAAGCTGACATCCCGCACCGCCTGCCGATGGCCGGAGTACGTACGGACGCAGCGCCGCTCGTTGTACACCTCCCACAGCTTCACGCGTGCGTCCATGCTGCAAGAGAGCAGCAAATGAGCGGAAACAGGAAACCAGCGGATCGCCGATATGCCCTTCGTATGGCCGGTCCAGGTGTGAATGTGTGCCTTCGGCAGGAAACAACGATCCGGAGCACCCGCTTTGCGCAGATTAACTCCAACATCGTGCGGTGGGTG]
[-] EMBL BX620644 [ CGATNGATCGCGGAAAAGATGACGATCTNGTTGTCGAGGCTCTGGCACGCCAGCCACTTGCCGTTCGGTGCGAGCGTTACCGCCGGCATCGAATGCATTGTCGGATCGGCAATGTACTTCATGTCCACCGGAATGTCCCACTCCCACACGCGCAAGCTCTTGTCGTCCGAGGTCGTCACGAAGCGTCGATTTTCGTCCACGAACGTGATCGTGTTGACCGCACCGAGATGGCGATCGTACTCCTGCACAACCTCACCGGTACGGGTGTCCCAGCAGATAATCTTCTTGTCCGACGTGCCGGCCACGAACAGGTGCTGCTTGTTAAAGTCCGGATGGAACTTGACGCAGAACGGGATCTTGCGCGAGTTGAACCGCGATATGACGTCGCCCGTTTCCGTGTCCCACAGCTTCAGGTACCGGTCGTACCCGGCCGAGATGAACCGTTCGCCCTTGTTATTGAAGCTGACATCCCGCACCGCCTGCCGATGGCCGGAGTACGTACGGACGCAGCGCCGCTCGTTGTACACCTCCCACAGCTTCACGCGTGCGTCCATGCTGCAAGAGAGCAGCAAATGAGCGGAAACAGGAAACCAGCGGATCGCCGATATGCCCTTCGTATGGCCGGTCCAGGTGTGAATGTGTGCCTTCGGCAGGAAACAACGATCCGGAGCACCCG ]
consensusID : consensus_5157#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 758 fasta sequence
[GTCGAGCGAACGCGTTCAATCCCAGTACTTTATTACTCCATCCCAGCCGGCCGTCACCAGCTTGCTTGCCTCGTGCGGATGCCACAGCGTTGCTATGCACACGTTATCGTGCGCCTGCCACTTCTTGTACAGCTTGGTCGTCTTCCAGTCCCATATGTAGCACTTGCCGTCACCATCGCCCGACACCAGGTAGCTCATGTCGGGCGAAAAGTCCAGATTGCACGCGTACCCCGACACCATGTGGCCGGTGAACGTTTTCTTGCGATTCATCTTGAACCGATTGATCGCGGAAAAGATGACGATCTTGTTGTCGAGGCTCTGGCACGCCAGCCACTTGCCGTTCGGTGCGAGCGTTACCGCCGGCATCGAATGCATTGTCGGATCGGCAATGTACTTCATGTCCACCGGAATGTCCCACTCCCACACGCGCAAGCTCTTGTCGTCCGAGGTCGTCACGAAGCGTCGATTTTCGTCCACGAACGTGATCGTGTTGACCGCACCGAGATGGCGATCGTACTCCTGCACAACCTCACCGGTACGGGTGTCCCACTGGAAAGGAGAGAAAGAAATAAATCAAATTAATATCACGCTTGTGTCCTATACAGTGATAACTACTTACGCAGATAATCTTCTTGTCCGACGTGCCGGCCACGAACAGGTGCTGCTTGTTAAGTCCGGATGGAACTTGACGCAGAACGGGATCTTGCGCGAGTTGAACCGCGATATGACGTCGCCCGTTTCCGTGTCCCACAGCTTCA]
[-] EMBL BX608162 [GTCGAGCGAACGCGTTCAATCCCAGTACTTTATTACTCCATCCCAGCCGGCCGTCACCAGCTTGCTTGCCTCGTGCGGATGCCACAGCGTTGCTATGCACACGTTATCGTGCGCCTGCCACTTCTTGTACAGCTTGGTCGTCTTCCAGTCCCATATGTAGCACTTGCCGTCACCATCGCCCGACACCAGGTAGCTCATGTCGGGCGAAAAGTCCAGATTGCACGCGTACCCCGACACCATGTGGCCGGTGAACGTTTTCTTGCGATTCATCTTGAACCGATTGATCGCGGAAAAGATGACGATCTTGTTGTCGAGGCTCTGGCACGCCAGCCACTTGCCGTTCGGTGCGAGCGTTACCGCCGGCATCGAATGCATTGTCGGATCGGCAATGTACTTCATGTCCACCGGAATGTCCCACTCCCACACGCGCAAGCTCTTGTCGTCCGAGGTCGTCACGAAGCGTCGATTTTCGTCCACGAACGTGATCGTGTTGACCGCACCGAGATGGCGATCGTACTCCTGCACAACCTCACCGGTACGGGTGTCCCACTGGAAAGGAGAGAAAGAAATAAATCAAATTAATATCACGCTTGTGTCCTATACAGTGATAACTACTTACGCAGATAATCTTCTTGTCCGACGTGCCGGCCACGAACAGGTGCTGCTTGTTAAGTCCGGATGGAACTTGACGCAGAACGGGATCTTGCGCGAGTTGAACCGCGATATGACGTCGCCCGTTTCCGTGTCCCACAGCTTCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_5157#0 CCATACCCGTCGAGCGAACGCTGTCAATCCCAGTACTTTATTACTCCATCCCAGCCGGCC 60
consensus_5157#1 --------GTCGAGCGAACGCGTTCAATCCCAGTACTTTATTACTCCATCCCAGCCGGCC 52
************* *************************************
consensus_5157#0 GTCACCAGCTTGCTTGCCTCGTGCGGATGCCACAGCGTTGCTATGCACACGTTATCGTGC 120
consensus_5157#1 GTCACCAGCTTGCTTGCCTCGTGCGGATGCCACAGCGTTGCTATGCACACGTTATCGTGC 112
************************************************************
consensus_5157#0 GCCTGCCACTTCTTGTACAGCTTGGTCGTCTTCCAGTCCCATATGTAGCACTTGCCGTCG 180
consensus_5157#1 GCCTGCCACTTCTTGTACAGCTTGGTCGTCTTCCAGTCCCATATGTAGCACTTGCCGTCA 172
***********************************************************
consensus_5157#0 CCATCGCCCGACACCAGGTAGCTCATGTCGGGCGAAAAGTCCAGATTGCACGCGTACCCC 240
consensus_5157#1 CCATCGCCCGACACCAGGTAGCTCATGTCGGGCGAAAAGTCCAGATTGCACGCGTACCCC 232
************************************************************
consensus_5157#0 GACACCATGTGGCCGGTGAACGTTTTCTTGCGATTCATCTTGAACCGATNGATCGCGGAA 300
consensus_5157#1 GACACCATGTGGCCGGTGAACGTTTTCTTGCGATTCATCTTGAACCGATTGATCGCGGAA 292
************************************************* **********
consensus_5157#0 AAGATGACGATCTTGTTGTCGAGGCTCTGGCACGCCAGCCACTTGCCGTTCGGTGCGAGC 360
consensus_5157#1 AAGATGACGATCTTGTTGTCGAGGCTCTGGCACGCCAGCCACTTGCCGTTCGGTGCGAGC 352
************************************************************
consensus_5157#0 GTTACCGCCGGCATCGAATGCATTGTCGGATCGGCAATGTACTTCATGTCCACCGGAATG 420
consensus_5157#1 GTTACCGCCGGCATCGAATGCATTGTCGGATCGGCAATGTACTTCATGTCCACCGGAATG 412
************************************************************
consensus_5157#0 TCCCACTCCCACACGCGCAAGCTCTTGTCGTCCGAGGTCGTCACGAAGCGTCGATTTTCG 480
consensus_5157#1 TCCCACTCCCACACGCGCAAGCTCTTGTCGTCCGAGGTCGTCACGAAGCGTCGATTTTCG 472
************************************************************
consensus_5157#0 TCCACGAACGTGATCGTGTTGACCGCACCGAGATGGCGATCGTACTCCTGCACAACCTCA 540
consensus_5157#1 TCCACGAACGTGATCGTGTTGACCGCACCGAGATGGCGATCGTACTCCTGCACAACCTCA 532
************************************************************
consensus_5157#0 CCGGTACGGGTGTCCCA------------------------------------------- 557
consensus_5157#1 CCGGTACGGGTGTCCCACTGGAAAGGAGAGAAAGAAATAAATCAAATTAATATCACGCTT 592
*****************
consensus_5157#0 ---------------------------GCAGATAATCTTCTTGTCCGACGTGCCGGCCAC 590
consensus_5157#1 GTGTCCTATACAGTGATAACTACTTACGCAGATAATCTTCTTGTCCGACGTGCCGGCCAC 652
*********************************
consensus_5157#0 GAACAGGTGCTGCTTGTTAAAGTCCGGATGGAACTTGACGCAGAACGGGATCTTGCGCGA 650
consensus_5157#1 GAACAGGTGCTGCTTGTTAA-GTCCGGATGGAACTTGACGCAGAACGGGATCTTGCGCGA 711
******************** ***************************************
consensus_5157#0 GTTGAACCGCGATATGACGTCGCCCGTTTCCGTGTCCCACAGCTTCAGGTACCGGTCGTA 710
consensus_5157#1 GTTGAACCGCGATATGACGTCGCCCGTTTCCGTGTCCCACAGCTTCA------------- 758
***********************************************
consensus_5157#0 CCCGGCCGAGATGAACCGTTCGCCCTTGTTATTGAAGCTGACATCCCGCACCGCCTGCCG 770
consensus_5157#1 ------------------------------------------------------------
consensus_5157#0 ATGGCCGGAGTACGTACGGACGCAGCGCCGCTCGTTGTACACCTCCCACAGCTTCACGCG 830
consensus_5157#1 ------------------------------------------------------------
consensus_5157#0 TGCGTCCATGCTGCAAGAGAGCAGCAAATGAGCGGAAACAGGAAACCAGCGGATCGCCGA 890
consensus_5157#1 ------------------------------------------------------------
consensus_5157#0 TATGCCCTTCGTATGGCCGGTCCAGGTGTGAATGTGTGCCTTCGGCAGGAAACAACGATC 950
consensus_5157#1 ------------------------------------------------------------
consensus_5157#0 CGGAGCACCCGCTTTGCGCAGATTAACTCCAACATCGTGCGGTGGGTG 998
consensus_5157#1 ------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||