These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5490#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1000 fasta sequence [CTTCTCGGCTTGTGCGACCGTCGCTCGTGCATTGTTCCAGTCCGCCGGCGTATTTCTATTCTTTTTGGCAAAATGAAGCGGAAATCAGAAGGAGGCAATAAACAACCTTTCCAGCGGAAAAAGACGGAGCTGGTATTTGATCCACAGAAAAGGGTAGAGTTTCTGACTGGATTCCACAAACGTAAGCAGCATCGTAAAAAAATTGCGCAGGGGGAAATGCAACGTAAACTTAAGGAGGAGACGAAGCGGATACGCGCAGAGGCGAAAGAAAAGATGCGTAATCTCTACCATTCGTACAAACCAATCCCAGAGCTCACGGAGGAGGATAAAGCGGAGGAGCAGGAAGACGAGTACGATACAGAGAATGTTACTGTGAAAGTGGTGGAACTCTCTACTCGCGATCTGGCAAAGGAAAACAATTGGATCGGCGAAAATCGTGGCATGGTGAAGGACGAAGAATCGGATGCGGAAAACTCGAGCGACGATGGAAATGATGAGCAGCAACTGGGAGTTGTGCCCGGCATGGAGCTGGAGGGAGAGAAGAAGACCAAGCGCAAGCATAAACTGTCCGCCGAAGAAGGCTCATCGAACGAGGCGGAAAACGGGGAGAGCGCCGTGAAGGAAAAGGCGAAACCGAAGAAAGGACCAGTTCTCAACTTGGACGGTATACGGTCAAAGAAGGATCTGAATCATAAGATAAAACGCTACGCGCTGAAATCCATGAAGACAAGTCAAGCCTTCCGACAGAAGACGCGCCTTCAACAGCAAAAGCAGCTAAAACAATCCCGACGCATCCGTCACCAGAAGGAGAAACACCTGAAACAGAAGAAAGGCTTCAACAAACACCGTAACGGAAACGATCGCGGCGAAACTAAGCGAAAACGAAAGGACGACTAAGAACATCTGCGTCCAGGGCAGT-GGGGGGGGGGAGGGGCTATGAAGAATCAGGATTAATAAATGATCGATCGCTATTGTTCAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL CNS096UM [CTTCTCGGCTTGTGCGACCGTCGCTCGTGCATTGTTCCAGTCCGCCGGCGTATTTCTATTCTTTTTGGCAAAATGAAGCGGAAATCAGAAGGAGGCAATAAACAACCTTTCCAGCGGAAAAAGACGGAGCTGGTATTTGATCCACAGAAAAGGGTAGAGTTTCTGACTGGATTCCACAAACGTAAGCAGCATCGTAAAAAAATTGCGCAGGGGGAAATGCAACGTAAACTTAAGGAGGAGACGAAGCGGATACGCGCAGAGGCGAAAGAAAAGATGCGTAATCTCTACCATTCGTACAAACCAATCCCAGAGCTCACGGAGGAGGATAAAGCGGAGGAGCAGGAAGACGAGTACGATACAGAGAATGTTACTGTGAAAGTGGTGGAACTCTCTACTCGCGATCTGGCAAAGGAAAACAATTGGATCGGCGAAAATCGTGGCATGGTGAAGGACGAAGAATCGGATGCGGAAAACTCGAGCGACGATGGAAATGATGAGCAGCAACTGGGAGTTGTGCCCGGCATGGAGCTGGAGGGAGAGAAGAAGACCAAGCGCAAGCATAAACTGTCCGCCGAAGAAGGCTCATCGAACGAGGCGGAAAACGGGGAGAGCGCCGTGAAGGAAAAGGCGAAACCGAAGAAAGGACCAGTTCTCAACTTGGACGGTATACGGTCAAAGAAGGATCTGAATCATAAGATAAAACGCTACGCGCTGAAATCCATGAAGACAAGTCAAGCCTTCCGACAGAAGACGCGCCTTCAACAGCAAAAGCAGCTAAAACAATCCCGACGCATCCGTCACCAGAAGGAGAAACACCTGAAACAGAAGAAAGGCTTCAACAAACACCGTAACGGAAACGATCGCGGCGAAACTAAGCGAAAACGAAAGGACGACTAAGAACATCTGCGTCCAGGGCAGT ACCGGGGGGGAGGGGCTATGAAGAATCAGGATTAATAAATGATCGATCGCTATTGTTCAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL CNS092L7 [ TTGTGCGACCGTCGCTCGTGCATTGTTCCAGTCCGCCGGCGTATTTCTATTCTTTTTGGCAAAATGAAGCGGAAATCAGAAGGAGGCAATAAACAACCTTTCCAGCGGAAAAAGACGGAGCTGGTATTTGATCCACAGAAAAGGGTAGAGTTTCTGACTGGATTCCACAAACGTAAGCAGCATCGTAAAAGAATTGCGCAGGGGGAAATGCAACGTAAACTTAAGGAGGAGACGAAGCGGATACGCGCAGAGGCGAAAGAAAAGATGCGTAATCTCTACCATTCGTACAAACCAATCCCAGAGCTCACGGAGGAGGATAAAGCGGAGGAGCAGGAAGACGAGTACGATACAGAGAATGTTACTGTGAAAGTGGTGGAACTCTCTACTCGCGATCTGGCAAAGGAAAACAATTGGATCGGCGAAAATCGTGGCATGGTGAAGGACGAAGAATCGGATGCGGAAAACTCGAGCGACGATGGAAATGATGAGCAGCAACTGGGAGTTGTGCCCGGCATGGAGCTGGAGGGAGAGAAGAAGACCAAGCGCAAGCATAAACTGTCCGCCGAAGAAGGCTCATCGAACGAGGCGGAAAACGGGGAGAGCGCCGTGAAGGAAAAGGCGAAACCGAAGAAAGGACCAGTTCTCAACTTGGACGGTATACGGTCAAAGAAGGATCTGAATCATAAGATAAAACGCTACGCGCTGAAATCCATGAAGACAAGTTAAGCCTTCCGACAGAAGACGCGCCTTCAACAGCAAAAGCAGCTAAAACAATCCCGACGCATCCGTCACCAGAAGGAGAAACACCTGAAACAGAAGAAAGGCTTCAACAAACACCGTAACGGAAACGATCGCGGCGAAACTAAGCGAAAACGAAAGGACGACTAAAAACATCTGCGTCCAGGGCAGTGGGGGGGGGGGAGGGGCTATGAAGAATCAGGATTAATAAATGATCGAAAACTATTTTTCAAAAAAAAAAA ] [-] EMBL CNS092L8 [ TATTTCTATTCTTTTTGGCAAAATGAAGCGGAAATCAGAAGGAGGCAATAAACAACCTTTCCAGCGGAAAAAGACGGGGCTGGTATTTGATCCACAGAAAAGGGTAGAGTTTCTTACTGGATTCCACAAACGTAAGCAGCATCGTAAAAAAATTGCGCAGGGGGAAATGCAACGTAAACTTAAGGGGGAGACGAAGGGGAAACGCGGAAAGGCGAAAGAAAAGATGCGTAATTTCTCCCATTCGTACAAACCAATCCCAGGGCTTACGGAGGAGGATAAAGCGGAGGGGCAGGAAAACGAGTACGAAACAGAAAATGTTACTGTGAAAGTGGTGGGACTCTCCACTCGCGGTCTGGCAAAGGAAAAAAATTGGATCGGCGAAAATCGTGGCATGGTAAAGGACGAAAAATCGGATGCGGAAAACTCGAGCGACGATGGAAATGATGAGCAGCAACTGGGAGTTGTGCCCGGCATGGGGCTGGAGGGAGAGAAGAAGACCAAGGGCAAGCATAAACTTTCCCCCGAAGAAGGGTCATCGAACGAGGCGGAAAACGGGGAGAGCGCCGTGAAGGGAAAGGCGAAACCGAAGAAAGGACCAGTTCTCCACTTGGACGGTATACGGTCAAAGAAGGATCTTAATCATAAGATAAAA ACTACGCGCTGAAATCCATGAAGACAAGTCAAGCCTTCCCACAGAAAACGCGCCTTCAACAGCAAAAGCAGCTAAAAAAATCCCGACGCATCCGTCACCAGAAGGAGAAACACCTGAAACAGAAGAAAGGCTTCAACAAACACCGTAACGGAAACGATCCCCGCGAAACTAAGCGAAAACGAAAGGACGACTAAGAA ] [-] EMBL CNS096UN [ CAACCTTTCCAGCGGAAAAAGACGGAGCTGGTATTTGATCCACAGAAAAGGGTAGAGTTTCTTACTGGATTCCACAAACGTAAGCAGCATCGTAAAAAAATTGCGCAGGGGGAAATGCAACGTAAACTTAAGGAGGAGACGAAGCGGATACGCGCAGAGGCGAAAGAAAAGATGCGTAATCTCTACCATTCGTAAAAACCAATCCCAGAGCTCACGGAGGAGGATAAAGCGGAGGAGCAGGAAGACGAGTACGATACAGAGAATGTTACTGTGAAAGTGGTGGAACTCTCTACTCGCGATCTGGCAAAGGAAAACAATTGGATCGGCGAAAATCGTGGCATGGTGAAGGACGAAGAATCGGATGCGGAAAACTCGAGCGACGATGGAAATGATGAGCAGCAACTGGGAGTTGTGCCCGGCATGGAGCTGGAGGGAGAGAAGAAGACCAAGCGCAAGCATAAACTGTCCGCCGAAGAAGGCTCATCGAACGAGGCGGAAAACGGGGAGAGCGCCGTGAAGGAAAAGGCGAAACCGAAGAAAGGACCAGTTCTCAACTTGGACGGTATACGGTCAAAGAAGGATCTGAATCATAAGATAAAA ACTACGCGCTGAAATCCATGAAGACAAGTCAAGCCTTCCGACAGAAGACGCGCCTTCAACAGCAAAAGCAGCTAAAACAATCCCGACGCATCCGTCACCAGAAGGAGAAACACCTGAAACAGAAGAAAGGCTTCAACAAACACCGTAACGGAAACGATCGCGGCGAAACTAAGCGAAAACGAAAGGACGACTAAGAACATCTGCGTCCAGGGCAGT GGGGGGGGGGAGGGGCTATGAAGAATCAGGATTAATAAATGATCGATCGCTATTGTTAACAAAAAAAAAAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||