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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5652#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 940 fasta sequence
[CCGCCCACGCGTCCGGTTTACACACCGTGCCCTGTGACAATTAGGCCAGGCCAGAACAGAGAAACGACGCCATCGGAGCTGTTGCTGGGGTACACACTCTCGTAAGCACACGCTGTAAGCGATCCCGCCAATCAATCTGCCAGAAGAACGCCATCCCGCGTCCGCTATGAACGTCAACAGCGGGGGTAGCAGCAACCATACCATCGGCAACCATCACACCCTCAACAGTAGCAACCTCCTCAGCAGCAACACCAACAATCAACACCACGCCAACAGCCATGGGCAGCAGCAGCAGCAAACGAACCGGATCAGCCGCAGCAGTACCCGAAAGAAGCCTTTCCACTTCATTTCCAACATGTGGAAGATGAAGAAAATCATCAAGTTTGAGGATATTATGTTCCACCGTGAGATGAACTGTCGGGCTAGATCGGAACCATCAGTGTCTACCTACAACTGCACCAGCAAGGGTTCCCAACGGAAGTCATCGCCCTCGTTCTCGATGCTGAGCCTGTCCCCGGGGAAGTTCCAGAAGTCGGATGAACTGGAGGTGACGCGCCTACGGTTATCACGCAACGATAACCCCTTCGTCCAGAAAGTCCTGGCCAGCCGGGACAACGTGACGGACGTAATCGATGACACCGAGTCCGATGACGCCATTTTGATACTGATGTCCGATGAATTTAATGGCGAAACGGAAACCGATCCACTAGCATTGCCACAGGTGCACGAGCACATGATACGGTCACCACCGCCGACCTTTTGGCCCCGTTCGCAAAAGACTGTGTTTAACTTTGGCGGCGAGGAGCGAACGCGAACCGGCGGTTCCGAAGGCATGCCGGGGGGATCGAAACACCAGCGGGCAAACCAGTGCAACTACTGAGGCGGAAGTGCAGTGCTACTACTAAACTGCTACTACCAGATAGGAATGTCGTACATGTGA]
[+] EMBL BM647975 [CCGCCCACGCGTCCGGTTTACACACCGTGCCCTGTGACAATTAGGCCAGGCCAGAACAGAGAAACGACGCCATCGGAGCTGTTGCTGGGGTACACACTCTCGTAAGCACACGCTGTAAGCGATCCCGCCAATCAATCTGCCAGAAGAACGCCATCCCGCGTCCGCTATGAACGTCAACAGCGGGGGTAGCAGCAACCATACCATCGGCAACCATCACACCCTCAACAGTAGCAACCTCCTCAGCAGCAACACCAACAATCAACACCACGCCAACAGCCATGGGCAGCAGCAGCAGCAAACGAACCGGATCAGCCGCAGCAGTACCCGAAAGAAGCCTTTCCACTTCATTTCCAACATGTGGAAGATGAAGAAAATCATCAAGTTTGAGGATATTATGTTCCACCGTGAGATGAACTGTCGGGCTAGATCGGAACCATCAGTGTCTACCTACAACTGCACCAGCAAGGGTTCCCAACGGAAGTCATCGCCCTCGTTCTCGATGCTGAGCCTGTCCCCGGGGAAGTTCCAGAAGTCGGATGAACTGGAGGTGACGCGCCTACGGTTATCACGCAACGATAACCCCTTCGTCCAGAAAGTCCTGGCCAGCCGGGACAACGTGACGGACGTAATCGATGACACCGAGTCCGATGA ]
[+] EMBL BX611315 [ AGCCTTTCCACTTCATTTCCAACATGTGGAAGATGAAGAAAATCATCAAGTTTGAGGATATTATGTTCCACCGTGAGATGAACTGTCGGGCTAGATCGGAACCATCAGTGTCTACCTACAACTGCACCAGCAAGGGTTCCCAACGGAAGTCATCGCCCTCGTTCTCGATGCTGAGCCTGTCCCCGGGGAAGTTCCAGAAGTCGGATGAACTGGAGGTGACGCGCCTACGGTTATCACGCAACGATAACCCCTTCGTCCAGAAGGTCCTGGCCAGCCGGGACAACGTGACGGACGTAATCGATGACACCGAGTCCGATGACGCCATTTTGATACTGATGTCCGATGAATTTAATGGCGAAACGGAAACCGATCCACTAGCATTGCCACAGGTGCACGAGCACATGATACGGTCACCACCGCCGACCTTTTGGCCCCGTTCGCAAAAGACTGTGTTTAACTTTGGCGGCGAGGAGCGAACGCGAACCGGCGGTTCCGAAGGCATGCCGGGGGGATCGAAACACCAGCGGGCAAACCAGTGCAACTACTGAGGCGGAAGTGCAGTGCTACTACTAAACTGCTACTACCAGATAGGAATGTCGTACATGTGA]
consensusID : consensus_5652#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 645 fasta sequence
[CCGCCCACGCGTCCGCGCTGGCAGTGAGAAGTGCAGGCAACGCCACCGTGCGTGAAAATTATGTTTACACACCGTGCCCTGTGACAATTAGGCCAGGCCAGAACAGAGAAACGACGCCATCGGAGCTGTTGCTGGGGTACACACTCTCGTAAGCACACGCTGTAAGCGATCCCGCCAATCAATCTGCCAGAAGAACGCCATCCCGCGTCCGCTATGAACGTCAACAGCGGGGGTAGCAGCAACCATACCATCGGCAACCATCACACCCTCAACAGTAGCAACCTCCTCAGCAGCAACACCAACAATCAACACCACGCCAACAGCCATGGGCAGCAGCAGCAGCAAACGAACCGGATCAGCCGCAGCAGTACCCGAAAGAAGCCTTTCCACTTCATTTCCAACATGTGGAAGATGAAGAAAATCATCAAGTTTGAGGATATTATGTTCCACCGTGAGATGAACTGTCGGGCTAGATCGGAACCATCAGTGTCTACCTACAACTGCACCAGCAAGGGTTCCCAACGGAAGTCATCGCCCTCGTTCTCGATGCTGAGCCTGTCCCCGGGGAAGTTCCAGAAGTCGGATGAACTGGAGGTGACGCGCCTACGGTTATCACGCAACGATAACCCCTTTCGTCCAGAAGGT]
[+] EMBL BM589649 [CCGCCCACGCGTCCGCGCTGGCAGTGAGAAGTGCAGGCAACGCCACCGTGCGTGAAAATTATGTTTACACACCGTGCCCTGTGACAATTAGGCCAGGCCAGAACAGAGAAACGACGCCATCGGAGCTGTTGCTGGGGTACACACTCTCGTAAGCACACGCTGTAAGCGATCCCGCCAATCAATCTGCCAGAAGAACGCCATCCCGCGTCCGCTATGAACGTCAACAGCGGGGGTAGCAGCAACCATACCATCGGCAACCATCACACCCTCAACAGTAGCAACCTCCTCAGCAGCAACACCAACAATCAACACCACGCCAACAGCCATGGGCAGCAGCAGCAGCAAACGAACCGGATCAGCCGCAGCAGTACCCGAAAGAAGCCTTTCCACTTCATTTCCAACATGTGGAAGATGAAGAAAATCATCAAGTTTGAGGATATTATGTTCCACCGTGAGATGAACTGTCGGGCTAGATCGGAACCATCAGTGTCTACCTACAACTGCACCAGCAAGGGTTCCCAACGGAAGTCATCGCCCTCGTTCTCGATGCTGAGCCTGTCCCCGGGGAAGTTCCAGAAGTCGGATGAACTGGAGGTGACGCGCCTACGGTTATCACGCAACGATAACCCCTTTCGTCCAGAAGGT]
[+] EMBL BX611259 [ GGCCCGAACAGAGAAACGACGCCATCGGAGCTGTTGCTGGGGTACACACTCTCGTAAGCACACGCTGTAAGCGATCCCGCCAATCAATCTGCCAGAAGAACGCCATCCCGCGTCCGCTATGAACGTCAACAGCGGGGGGAGCAGCAACCATACCATCGGCAACCATCACACCCTCAACAGTAGCAACCTCCTCAGCAGCAACCCCAACAATCAACACCACGCCAACAGCCATGGGCAGCAGCAGCAGCAAACGAACCGGATCAGCCGCAGCAGTACCCGAAAGAAGCCTTTCCACTTCATTTCCAACATGTGGAAGAAGAAGAAAATCA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_5652#0 ---------------------------------------------CCGCCCACGCG--TC 13
consensus_5652#1 CCGCCCACGCGTCCGCGCTGGCAGTGAGAAGTGCAGGCAACGCCACCGTGCGTGAAAATT 60
*** * * *
consensus_5652#0 CGGTTTACACACCGTGCCCTGTGACAATTAGGCCAGGCCAGAACAGAGAAACGACGCCAT 73
consensus_5652#1 ATGTTTACACACCGTGCCCTGTGACAATTAGGCCAGGCCAGAACAGAGAAACGACGCCAT 120
**********************************************************
consensus_5652#0 CGGAGCTGTTGCTGGGGTACACACTCTCGTAAGCACACGCTGTAAGCGATCCCGCCAATC 133
consensus_5652#1 CGGAGCTGTTGCTGGGGTACACACTCTCGTAAGCACACGCTGTAAGCGATCCCGCCAATC 180
************************************************************
consensus_5652#0 AATCTGCCAGAAGAACGCCATCCCGCGTCCGCTATGAACGTCAACAGCGGGGGTAGCAGC 193
consensus_5652#1 AATCTGCCAGAAGAACGCCATCCCGCGTCCGCTATGAACGTCAACAGCGGGGGTAGCAGC 240
************************************************************
consensus_5652#0 AACCATACCATCGGCAACCATCACACCCTCAACAGTAGCAACCTCCTCAGCAGCAACACC 253
consensus_5652#1 AACCATACCATCGGCAACCATCACACCCTCAACAGTAGCAACCTCCTCAGCAGCAACACC 300
************************************************************
consensus_5652#0 AACAATCAACACCACGCCAACAGCCATGGGCAGCAGCAGCAGCAAACGAACCGGATCAGC 313
consensus_5652#1 AACAATCAACACCACGCCAACAGCCATGGGCAGCAGCAGCAGCAAACGAACCGGATCAGC 360
************************************************************
consensus_5652#0 CGCAGCAGTACCCGAAAGAAGCCTTTCCACTTCATTTCCAACATGTGGAAGATGAAGAAA 373
consensus_5652#1 CGCAGCAGTACCCGAAAGAAGCCTTTCCACTTCATTTCCAACATGTGGAAGATGAAGAAA 420
************************************************************
consensus_5652#0 ATCATCAAGTTTGAGGATATTATGTTCCACCGTGAGATGAACTGTCGGGCTAGATCGGAA 433
consensus_5652#1 ATCATCAAGTTTGAGGATATTATGTTCCACCGTGAGATGAACTGTCGGGCTAGATCGGAA 480
************************************************************
consensus_5652#0 CCATCAGTGTCTACCTACAACTGCACCAGCAAGGGTTCCCAACGGAAGTCATCGCCCTCG 493
consensus_5652#1 CCATCAGTGTCTACCTACAACTGCACCAGCAAGGGTTCCCAACGGAAGTCATCGCCCTCG 540
************************************************************
consensus_5652#0 TTCTCGATGCTGAGCCTGTCCCCGGGGAAGTTCCAGAAGTCGGATGAACTGGAGGTGACG 553
consensus_5652#1 TTCTCGATGCTGAGCCTGTCCCCGGGGAAGTTCCAGAAGTCGGATGAACTGGAGGTGACG 600
************************************************************
consensus_5652#0 CGCCTACGGTTATCACGCAACGATAACCCCTT-CGTCCAGAAAGTCCTGGCCAGCCGGGA 612
consensus_5652#1 CGCCTACGGTTATCACGCAACGATAACCCCTTTCGTCCAGAAGGT--------------- 645
******************************** ********* **
consensus_5652#0 CAACGTGACGGACGTAATCGATGACACCGAGTCCGATGACGCCATTTTGATACTGATGTC 672
consensus_5652#1 ------------------------------------------------------------
consensus_5652#0 CGATGAATTTAATGGCGAAACGGAAACCGATCCACTAGCATTGCCACAGGTGCACGAGCA 732
consensus_5652#1 ------------------------------------------------------------
consensus_5652#0 CATGATACGGTCACCACCGCCGACCTTTTGGCCCCGTTCGCAAAAGACTGTGTTTAACTT 792
consensus_5652#1 ------------------------------------------------------------
consensus_5652#0 TGGCGGCGAGGAGCGAACGCGAACCGGCGGTTCCGAAGGCATGCCGGGGGGATCGAAACA 852
consensus_5652#1 ------------------------------------------------------------
consensus_5652#0 CCAGCGGGCAAACCAGTGCAACTACTGAGGCGGAAGTGCAGTGCTACTACTAAACTGCTA 912
consensus_5652#1 ------------------------------------------------------------
consensus_5652#0 CTACCAGATAGGAATGTCGTACATGTGA 940
consensus_5652#1 ----------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||