These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_598#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 475 fasta sequence [CCGATTCATCGGTTGGAACATTGATTGTTGGACAAGTCTTGATCGCGAGAGGCAAAGGAAGATGGTAGAAGAGGTCTGGGAAAATTCATTTGTAGCAGAAGAAGTGTAGGAACAGAGTGAGGAATTTCTACGGAGTTCAGGAAGAGATCCTTAAGGCTTAGGCTTGGTTGGGAACGTTGCCGCAATCTTCGCTTATTCTGGGTGTTTTTGAATTAGTTTTCGTATGCGAAGACGATTTTCTTTCAGCAGACTATCGAACGTAGGGATGCGAAATAGCGGGGCAGCGAGGGGAGGCGAGAAAATATCCAAGAGAACCTAATACGAAGAGCACCAGTGTTCGTGTCGGTGCGTTTGTAGTGTGTTGGGTACTGGTAAATGAGCAAGAGATAGATAGAGAGAGAGAGAGTGATCCTTTTTCACACACAAAGAGTATCCTTTCTTCGGTATGTTGGGAGCATCCTAGCAAGCGCAGCAG] [+] EMBL BM620919 [CCGATTCATCGGTTGGAACATTGATTGTTGGACAAGTCTTGATCGCGAGAGGCAAAGGAAGATGGTAGAAGAGGTCTGGGAAAATTCATTTGTAGCAGAAGAAGTGTAGGAACAGAGTGAGGAATTTCTACGGAGTTCAGGAAGAGATCCTTAAGGCTTAGGCTTGGTTGGGAACGTTGCCGCAATCTTCGCTTATTCTGGGTGTTTTTGAATTAGTTTTCGTATGCGAAGACGATTTTCTTTCAGCAGACTATCGAACGTAGGGATGCGAAATAGCGGGGCAGCGAGGGGAGGCGAGAAAATATCCAAGAGAACCTAATACGAAGAGCACCAGTGTTCGTGTCGGTGCGTTTGTAGTGTGTTGGGTACTGGTAAATGAGCAAGAGATAGATAGAGAGAGAGAGAGTGATCCTTTTTCACACACAAAGAGTATCCTTTCTTCGGTATGTTGGGAGCATCCTAGCAAGCGCAGCAG] consensusID : consensus_598#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 432 fasta sequence [ACCCACGCGTCCGATCGGTTGGAACATTGATTGTTGGACAAGTTTTGATCGCGAGAGGCAAAGGAAGATGGTAGGGGAGAGGTCTGGGAAAATTTATTTGTAGCAGAAGAAGTGTAGGAACAGAGCGAGGAATTTCTACGGAGTTCAGGAAGAGATCCTTAAGGCTTAGGCTTGGTTGGCAACGTTGCCACAATCTTCGCTTATTCTGGGTGTTTTTGAATTAGTTTTCGTATGCGAAGACAATTTTCTTTCAGCAGACTATCGAACGTAGGGATGCGAAATAGCGGGGCAGCGAGGGGAGGCGAGAAAATATCCAAGAGAACCTAATACGAAGAGCACCAGTGTTCGGGTCGGTGCGTTTGTAGTGTGTTAGGCACTGGTAAATGAGTAAGAGATAGATAGAGAGAGAGAGAGAGAGAGAGAGAGAGTAAA] [+] EMBL BM643296 [ACCCACGCGTCCGATCGGTTGGAACATTGATTGTTGGACAAGTTTTGATCGCGAGAGGCAAAGGAAGATGGTAGGGGAGAGGTCTGGGAAAATTTATTTGTAGCAGAAGAAGTGTAGGAACAGAGCGAGGAATTTCTACGGAGTTCAGGAAGAGATCCTTAAGGCTTAGGCTTGGTTGGCAACGTTGCCACAATCTTCGCTTATTCTGGGTGTTTTTGAATTAGTTTTCGTATGCGAAGACAATTTTCTTTCAGCAGACTATCGAACGTAGGGATGCGAAATAGCGGGGCAGCGAGGGGAGGCGAGAAAATATCCAAGAGAACCTAATACGAAGAGCACCAGTGTTCGGGTCGGTGCGTTTGTAGTGTGTTAGGCACTGGTAAATGAGTAAGAGATAGATAGAGAGAGAGAGAGAGAGAGAGAGAGAGTAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_598#0 ------CCGATTCATCGGTTGGAACATTGATTGTTGGACAAGTCTTGATCGCGAGAGGCA 54 consensus_598#1 ACCCACGCGTCCGATCGGTTGGAACATTGATTGTTGGACAAGTTTTGATCGCGAGAGGCA 60 ** ****************************** **************** consensus_598#0 AAGGAAGATGGTAGA--AGAGGTCTGGGAAAATTCATTTGTAGCAGAAGAAGTGTAGGAA 112 consensus_598#1 AAGGAAGATGGTAGGGGAGAGGTCTGGGAAAATTTATTTGTAGCAGAAGAAGTGTAGGAA 120 ************** ***************** ************************* consensus_598#0 CAGAGTGAGGAATTTCTACGGAGTTCAGGAAGAGATCCTTAAGGCTTAGGCTTGGTTGGG 172 consensus_598#1 CAGAGCGAGGAATTTCTACGGAGTTCAGGAAGAGATCCTTAAGGCTTAGGCTTGGTTGGC 180 ***** ***************************************************** consensus_598#0 AACGTTGCCGCAATCTTCGCTTATTCTGGGTGTTTTTGAATTAGTTTTCGTATGCGAAGA 232 consensus_598#1 AACGTTGCCACAATCTTCGCTTATTCTGGGTGTTTTTGAATTAGTTTTCGTATGCGAAGA 240 ********* ************************************************** consensus_598#0 CGATTTTCTTTCAGCAGACTATCGAACGTAGGGATGCGAAATAGCGGGGCAGCGAGGGGA 292 consensus_598#1 CAATTTTCTTTCAGCAGACTATCGAACGTAGGGATGCGAAATAGCGGGGCAGCGAGGGGA 300 * ********************************************************** consensus_598#0 GGCGAGAAAATATCCAAGAGAACCTAATACGAAGAGCACCAGTGTTCGTGTCGGTGCGTT 352 consensus_598#1 GGCGAGAAAATATCCAAGAGAACCTAATACGAAGAGCACCAGTGTTCGGGTCGGTGCGTT 360 ************************************************ *********** consensus_598#0 TGTAGTGTGTTGGGTACTGGTAAATGAGCAAGAGATAGATAGAGAGAGAGAGAGTGATCC 412 consensus_598#1 TGTAGTGTGTTAGGCACTGGTAAATGAGTAAGAGATAGATAGAGAGAGAGAGAGAGAG-- 418 *********** ** ************* ************************* ** consensus_598#0 TTTTTCACACACAAAGAGTATCCTTTCTTCGGTATGTTGGGAGCATCCTAGCAAGCGCAG 472 consensus_598#1 --------AGAGAGAGAGTAAA-------------------------------------- 432 * * * ****** consensus_598#0 CAG 475 consensus_598#1 --- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||