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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6079#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1327 fasta sequence
[CGAACGGAAGCGTTTGGGATAAAGCCGCTGACTGTTCGCCGGGCTCGACGGAGTGATTTTGTGCGCCTGTGTGTGTGTGTGTGTTTGTACACGGGGCGTTCGCTCCGGGTGTTTTTCGCTGACCAAAACACTTAACACTTCCCCTCCCCCCGCACGAGCTTCGCACATCGCACGGTGGAGCCGACGACGCCGACGGTCGAACCGGTGGCGATGGCCCCGGACACGGTGCCGGCCGTGCCGGCTGCCGAGGTGCAGCC-GGACGGCGG-GTCGCCGGCCAGCGAGTCGCCGGCCACGCTGATCACCCAGGTGCAGCGGATGCTGACGCCGCCGGCCGACCTGCTCGAATGGAAGGACATGCCGCAGCACCTGCAGTTCAACCCGTACGTGCTGACCGGCTACCGGCCGCTGCAGGGCGTCAAGGGGTGCCTCAGCAGCCTGTTCTACGTGCACAACGAAACCATCAATATTCTCACACACGGCATTCCAATTGTCTACATCCTCGCAACAGTGCCGGCAATGATGCCATGGGAGAAAGACTATCGCTT-TCTGTCGTGGTGTCATCTGGTCGGTT-CCGTTGCACCGTGGTGCGGCAGCTTCGTCTACCATCTGT-TCATGAACCTGGAGAACGGCGAGGGCATCTACTATCGGCTGCTGCAGCTCGACATGCTCGGCATCTGGATTAGCCAAAGTT-TCGGAGCGCTACCGATGGTAACGGCAACGGTGTACTGTTTAAACTTTCCATTAAAATGGTTGCTCATCATTTCCTACTCGCTGCTGTGCATTTGGGGCCTGTTTAAGGCAATGACGGCATCCTCGCCCTGGCAGCGACGGTTATGCTTTCTGCTGCCGTTCAGCATGCGCATCATACTCACGTTGCTGCGAATCTCGAAGCTCGGCGGCGGAAATCCTACCTCACTCACCCACGTCTTTCTGCAGGACGCCGTGTCAGCCGTGGGTGGAGTAATTGGAGCGATGCATATCCCCGAGAAATGGTTTCCCGGAAGTGTTGACATCTATTTGAACTCGCATAACATCATGCACGTCCTGGTGGTCGTCGCCGTCTACTCCATGCACCAGGCGACCATACGCGACATCGAGTGGATGCGGCGGGCAGAATGTAATGGGCNTAACTATACCTCAACGCTGAACATAGACTCGATCANCGGGTNCNNCTGGAGCTATGACNTGNGCNNGCAGGAGTAGCAGAAGCAGTAGCAGCAGCAGCATNTACAGCAACAGNAGCCNGNCGCANGNGGCNGTACNGGTGCAGNNGNCGGACTTACNNGCNNGGCCGTCGTATTGGNTGTTGCAANCGTNACGCCGCAAN]
[+] EMBL BX607314 [CGAACGGAAGCGTTTGGGATAAAGCCGCTGACTGTTCGCCGGGCTCGACGGAGTGATTTTGTGCGCCTGTGTGTGTGTGTGTGTTTGTACACGGGGCGTTCGCTCCGGGTGTTTTTCGCTGACCAAAACACTTAACACTTCCCCTCCCCCCGCACGAGCTTCGCACATCGCACGGTGGAGCCGACGACGCCGACGGTCGAACCGGTGGCGATGGCCCCGGACACGGTGCCGGCCGTGCCGGCTGCCGAGGTGCAGCC GGACGGCGG GTCGCCGGCCAGCGAGTCGCCGGCCACGCTGATCACCCAGGTGCAGCGGATGCTGACGCCGCCGGCCGACCTGCTCGAATGGAAGGACATGCCGCAGCACCTGCAGTTCAACCCGTACGTGCTGACCGGCTACCGGCCGCTGCAGGGCGTCAAGGGGTGCCTCAGCAGCCTGTTCTACGTGCACAACGAAACCATCAATATTCTCACACACGGCATTCCAATTGTCTACATCCTCGCAACAGTGCCGGCAATGATGCCATGGGAGAAAGACTA ]
[+] EMBL CNS09BTS [ TGACTGTTCGCCGGGCTCGACGGAGTGATTTTGTGCGCCTGTGTGTGTGTGTGTGTTTGTACACGGGGCGTTCGCTCCGGGTGTTTTTCGCTGACCAAAACACTTAACACTTCCCCTCCCCCCGCACGAGCTTCGCACAGCGCACGGTGGAGCCGACGACGCCGACGGTCGAACCGGTGGCGATGGCCCCGGACACGGTGCCGGCCGTGCC GCTGCCGAGGTGCAGCCGGGACGGCGGTGTCGCCGGCCAGCGAGTCGCCGGCCA ]
[+] EMBL BM625289 [ ccgGACGCCGCCGGCCGACCTGCTCGAATGGAAGGACATGCCGCAGCACCTGCAGTTCAACCCGTACGTGCTGACCGGCTACCGGCCGCTGCAGGGCGTCAAGGGGTGCCTCAGCAGCCTGTTCTACGTGCACAACGAAACCATCAATATTCTCACACACGGCATTCCAATTGTCTACATCCTCGCAACAGTGCCGGCAGTGATGCCATGGGAGAAAGACTATCGCTT TCTGTCGTGGTGTCATCTGGTCGGTT CCGTTGCACCGTGGTGCGGCAGCTTCGTCTACCATCTGT TCATGAACCTGGAGAACGGCGAGGGCATCTACTATCGGCTGCTGCAGCTCGACATGCTCGGCATCTGGATTAGCCAAAGTT TCGGAGCGCTACCGATGGTAACGGCAACGGTGTACTGTTTAAACTTTCCATTAAAATGGTTGCTCATCATTTCCTACTCGCTGCTGTGCATTTGGGGCCTGTTTAAGGCAATGACGGCATCCTCGCCCTGGCAGCGACGGTTATGCTTTCTGCTGCCGTTCAGCATGCGCATCATACTCACGTTGCTGCGAATCTCGAAGCTCGGCGGCGGAAATCCTACCTCACTCACCCACGTCTTTCTGCAGGACGCCGTGT ]
[+] EMBL CF541654 [ ccattATGGCCGAGATCCTCGCAACAGTGCCGGCAATGATGCCATGGGAGAAAGACTATCGCTTNCCTGTCGTGGTGTCATCTGGTCGGTTGCCGTTGCACCGTGGTGCGGCAGCTTCGTCTACCATCTGTGTCATGAACCTGGAGAACGGCGAGGGCATCTACTATCGGCTGCTGCAGCTCGACATGCTCGGCATCTGGATTAGCCAAAGTTNTCGGAGCGCTACCGATGGTAACAGCAACGGTGTACTGTTTAAACTTTCCATTAAAATGGTTGCTCATCATTTCCTACTCGCTGCTGTGCATTTGGGGCCTGTTTAAGGCAATGACGGCATCCTCGCCCTGGCAGCGACGGTTATGCTTTCTGCTGCCGTTCAGCATGCGCATCATACTCACGTTGCTGCGAATCTCGAAGCTCGGCGGCGGAAATCCTACCTCACTCACCCACGTCTTTCTGCAGGACGCCGTGTCAGCCGTGGGTGGAGTAATTGGAGCGATGCATATCCCCGAGAAATGGTTTCCCGGAAGTGTTGACATCTATTTGAACTCGCATAACATCATGCACGTCCTGGTGGTCGTCGCCGTCTACTCCATGCACCAGGCGACCATACGCGACATCGAGTGGATGCGGCGGGCAGAATGTAATGGGCNTAACTATACCTCAACGCTGAACATAGACTCGATCANCGGGTNCNNCTGGAGCTATGACNTGNGCNNGCAGGAGTAGCAGAAGCAGTAGCAGCAGCAGCATNTACAGCAACAGNAGCCNGNCGCANGNGGCNGTACNGGTGCAGNNGNCGGACTTACNNGCNNGGCCGTCGTATTGGNTGTTGCAANCGTNACGCCGCAAN]
consensusID : consensus_6079#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 815 fasta sequence
[TGGATGCACACGTGCAGGCCGTGCTTGTTTGAAGAAAAACTAAAAAAAAACAACATCTGAATCACAAGGAAAACCTCCCAGAAGGGCACACCGAGCGGTTGGCGTTCGTTTAGTGTGTTGCTCTGTGCTCGAGTTTACTTTTAGAATCCGCTCAGTCGATCGGTCGGTATATGAAGGTCAGCAAGGCACGCCCGGCGCATTGTGTGTTGGCTTTCCCGCCCTAGGTAGAGGCTGCTCACTGCACTCAGCTCTCCGTGCTCCGTATTGCGCTAAATGAATGCCGGAATACCGAGAATTGCCATATGCAGGAAGATTCCGCTGAATGTATTGAAATCGGATATTAAAGTACTGGGTTCTGCGAGAATTCTACGCTTCTGAAGCCGATGTTGAATTGGTTGCATATTGTTGGGTGTGCATCTTCACGCGAATACCAGATATGCTGGATTTGGATACTACTGATAAGCCTATGACGGCTAACAGCACTGGATTCTGCGAGAATTCTTCGCTTCTGAAGCCAACGTGAAATTGGGTTGCATATTCTTGGACGTGCATCTTCACGGGCACCCCAGATATGCTGGATTTGGATACTACTGACGGCTAACATTCTAATGTTATTCCCATTTCCCGTAAACAGGCGACCATACGCGACATCGAGTGGATGCAGCGGGCAGAATGTAATGGGCTTAACTATACCTCAACGCTGAACATAGACTCGATCAACGGGTCCCACCTGGAGCTATGACTTGTGCCAGCAGGAGTAGCAGAAGCAGTAGCAGCAGCAGCATCTACAGCAACAGTAGCCTGCCGCAGTGGGC]
[+] EMBL BX615413 [TGGATGCACACGTGCAGGCCGTGCTTGTTTGAAGAAAAACTAAAAAAAAACAACATCTGAATCACAAGGAAAACCTCCCAGAAGGGCACACCGAGCGGTTGGCGTTCGTTTAGTGTGTTGCTCTGTGCTCGAGTTTACTTTTAGAATCCGCTCAGTCGATCGGTCGGTATATGAAGGTCAGCAAGGCACGCCCGGCGCATTGTGTGTTGGCTTTCCCGCCCTAGGTAGAGGCTGCTCACTGCACTCAGCTCTCCGTGCTCCGTATTGCGCTAAATGAATGCCGGAATACCGAGAATTGCCATATGCAGGAAGATTCCGCTGAATGTATTGAAATCGGATATTAAAGTACTGGGTTCTGCGAGAATTCTACGCTTCTGAAGCCGATGTTGAATTGGTTGCATATTGTTGGGTGTGCATCTTCACGCGAATACCAGATATGCTGGATTTGGATACTACTGATAAGCCTATGACGGCTAACAGCACTGGATTCTGCGAGAATTCTTCGCTTCTGAAGCCAACGTGAAATTGGGTTGCATATTCTTGGACGTGCATCTTCACGGGCACCCCAGATATGCTGGATTTGGATACTACTGACGGCTAACATTCTAATGTTATTCCCATTTCCCGTAAACAGGCGACCATACGCGACATCGAGTGGATGCAGCGGGCAGAATGTAATGGGCTTAACTATACCTCAACGCTGAACATAGACTCGATCAACGGGTCCCACCTGGAGCTATGACTTGTGCCAGCAGGAGTAGCAGAAGCAGTAGCAGCAGCAGCATCTACAGCAACAGTAGCCTGCCGCAGTGGGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6079#0 CGAACGGAAGCGTTTGGGATAAAGCCGCTGACTGTTCGCCGGGCTCGACGGAGTGATTTT 60
consensus_6079#1 ------------------------------------------------------------
consensus_6079#0 GTGCGCCTGTGTGTGTGTGTGTGTTTGTACACGGGGCGTTCGCTCCGGGTGTTTTTCGCT 120
consensus_6079#1 ------------------------------------------------------------
consensus_6079#0 GACCAAAACACTTAACACTTCCCCTCCCCCCGCACGAGCTTCGCACATCGCACGGTGGAG 180
consensus_6079#1 ------------------------------------------------------------
consensus_6079#0 CCGACGACGCCGACGGTCGAACCGGTGGCGATGGCCCCGGACACGGTGCCGGCCGTGCCG 240
consensus_6079#1 ------------------------------------------------------------
consensus_6079#0 GCTGCCGAGGTGCAGCCGGACGGCGGGTCGCCGGCCAGCGAGTCGCCGGCCACGCTGATC 300
consensus_6079#1 ------------------------------------------------------------
consensus_6079#0 ACCCAGGTGCAGCGGATGCTGACGCCGCCGGCCGACCTGCTCGAATGGAAGGACATGCCG 360
consensus_6079#1 ------------------------------------------------------------
consensus_6079#0 CAGCACCTGCAGTTCAACCCGTACGTGCTGACCGGCTACCGGCCGCTGCAGGGCGTCAAG 420
consensus_6079#1 -------------TGGATGCACACGTGCAGGCCG--TGCTTGT--TTGAAGAAAAACTAA 43
* * * ****** * *** * * * ** ** * *
consensus_6079#0 GGGTGCCTCAGCAGCCTGTTCTACGTGCACAACGAAACCATCAATATTCTCACACACGGC 480
consensus_6079#1 AAAAA----AACAACA---TCTGAAT-CACAAGGAAAAC-------CTCCCAGA-AGGGC 87
* ** * *** * ***** **** * ** ** * * ***
consensus_6079#0 ATTCCAATTGTCTACATCCTCGCAACAGTGCCGGCAATGATGCCATGGGAGAAAGACTAT 540
consensus_6079#1 ACACCGAGCGGTTG-GCGTTCGTT-TAGTG-------TGTTGCTCTGTGCTCGAGTTTAC 138
* ** * * * *** **** ** *** ** * ** **
consensus_6079#0 CGCTTTCTGTCGTGGTGTCATCTGGTCGGTTCCGTTGCACCGTGGTGCGGCA-GCTTCGT 599
consensus_6079#1 TTTTAGAATCCGCTCAGTCGATCGGTCGGTAT--ATGAAGGTCAGCAAGGCACGCCCGGC 196
* ** *** ******* ** * * **** ** *
consensus_6079#0 CTACCATCTGTTCATGAACCTGGAGAACGGCGAGGGCATCTACTATCGGCTGCTGCAGCT 659
consensus_6079#1 GCATTGTGTGTTGGCTTTCCCGCCCTAGGTAGAGGCTGCTCACTGC-----ACT-CAGCT 250
* * **** ** * * * **** *** ** *****
consensus_6079#0 CGACATGCTCGGCATCTGGATTAGCCAAAGTTTCGGAGCGCTACCGATGGTAACG-GCAA 718
consensus_6079#1 CTCCGTGCTCCGTAT-TGCGCTAAATGAA-TGCCGGAATACCGAGAATTGCCATATGCAG 308
* * ***** * ** ** ** ** * **** * ** * * ***
consensus_6079#0 CGGTGTACTGTTTAAACTTTCCATTAAAATGGTTGCTCATCATTTCCTACTCGCTGCTGT 778
consensus_6079#1 GAAGATTCCGCTGAA----TGTATTGAAATCG--GATATTAAAGTACTGGGTTCTGC-GA 361
* * * * ** * *** **** * * * * * * ** **** *
consensus_6079#0 GCATTTGGGGCCTGTTTAAGGCAATGACGGCATCCTCGCCCTGGCAGCGACGGTTATGCT 838
consensus_6079#1 GAATTCTACGCTT-CTGAAGCCGATGTTGAATTGGTTGC----ATATTGTTGGGTGTGCA 416
* *** ** * * *** * *** * * * ** * * ** * ***
consensus_6079#0 TTCTGCTGCCGTT-CAGCATGCGCATCATACTCACGTTGCTGCGAATCTCGAAGCTCGGC 897
consensus_6079#1 TCTTCACGCGAATACCAGATATGCTGGATTTGGATACTACTGATAAGCCTA-----TGAC 471
* * ** * * ** ** ** * * *** ** * * *
consensus_6079#0 GGCGGAAATC-CTACCTCACTCACCCACGTCTTTCTGCAGGACGCCGTGTCAGCCGTGGG 956
consensus_6079#1 GGCTAACAGCACTGGATTCTGCGAGAATTCTTCGCTTCTGAAGCCAACGTGAAAT-TGGG 530
*** * * * ** * * * * ** * * * * ** * ****
consensus_6079#0 TGGAGTAATTGGAGCGATGCATATCCCCGAGAAATGGTTTCCCGGAAGTGTTGACATCTA 1016
consensus_6079#1 TTGCATATTCTTGGACGTGCATCTTCACGGGCA------CCCCAGATATGCTGG-----A 579
* * ** * * ***** * * ** * * *** ** ** ** *
consensus_6079#0 TTTGAACTCGCATAACATCATGCACGTCCTGGTGGTCGTCGCCGTCTACTCCATGCACCA 1076
consensus_6079#1 TTTGGATACTACTGACGGCT--AACATTCTAATG-TTATTCCCATTTCCCGTA---AACA 633
**** * * * ** * ** * ** ** * * ** * * * * * **
consensus_6079#0 GGCGACCATACGCGACATCGAGTGGATGCGGCGGGCAGAATGTAATGGGCNTAACTATAC 1136
consensus_6079#1 GGCGACCATACGCGACATCGAGTGGATGCAGCGGGCAGAATGTAATGGGCTTAACTATAC 693
***************************** ******************** *********
consensus_6079#0 CTCAACGCTGAACATAGACTCGATCANCGGGTNCNNC-TGGAGCTATGACNTGNGCNNGC 1195
consensus_6079#1 CTCAACGCTGAACATAGACTCGATCAACGGGTCCCACCTGGAGCTATGACTTGTGCCAGC 753
************************** ***** * * ************ ** ** **
consensus_6079#0 AGGAGTAGCAGAAGCAGTAGCAGCAGCAGCATNTACAGCAACAGNAGCCNGNCGCANGNG 1255
consensus_6079#1 AGGAGTAGCAGAAGCAGTAGCAGCAGCAGCATCTACAGCAACAGTAGCCTGCCGCAGTGG 813
******************************** *********** **** * **** *
consensus_6079#0 GCNGTACNGGTGCAGNNGNCGGACTTACNNGCNNGGCCGTCGTATTGGNTGTTGCAANCG 1315
consensus_6079#1 GC---------------------------------------------------------- 815
**
consensus_6079#0 TNACGCCGCAAN 1327
consensus_6079#1 ------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||