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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6146#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1187 fasta sequence
[ATTAAAATTAGTATCCGCTCTACCAAACCTCGTGAAATTCATTTCATTCAAATTGAAACGAATGTTCCCGTTCCCCTAGAAACTCCATTTTGCACTGCGCGTCAACATCAACATTTTGATCTAGGCGGCTAGGACGGCTAGGACCTGAGCGGTAAATGAGAGGAGATTAGGTGGTGCGCCAAACACTGATTTTGGTGGGCTTAGGCATAGGAATTCAAAAAAAGGAACGTTTCTAGACAATCGATTAAATTCGGCGCACAAGCACAAGCGCAAAGGGTTTGATCTGGCCCAGGCCCTGCGTTGTAAGGGCGTAAGGGAACTGCTGACAACATTTATCCCAGCACTGGCACTGCATCTGGAACCGGTCTTTTCACTGATCCCGAACCTTAACCGTTCCTGGTAGCTACTCCCTAATATTTGAAATGGATCTGATACCGAAATCACATTTATCTTGGATCGCAACCCCTAGCGGATACCAATCCGGAATCAGACTAGCATTAAAACATGTGCATCTTGGTATATTTTAGTCAAAATCAAATCTTTCTTGAACACCACTAAAAACAATATTTGTTCTCCCTAATAACTGCAATGTTCTCCTTATTAGGAAGTTAGCCCTCTGATCTCCTTCTCCTGCGTACCTCCTTTTCATTCTCTTTCCCGCGAATTTATATAACCATATCCATAGCGGTCTAGGGACGGATTCTGAATCTATCTCAATCTAGATATCTTTTGCCAAACCTGGCCCGGAATAGATCACGGACCTATCCCGATCCAGCAACCGGTCCCATAACCATGGTTGGTCTATGAAAAGATACTATCCCTTTAAATAATTGGTCTGGAGATGATGAGTATTGAAATGTGTTTGGCAATTCATTGCGTCTTATTTGAAAAATGATTTATACTTTTCTTATTGACCCTACATGAATGCTCAAGGACCTAAGATACGCAGAACAAATATCGAACGATGTAAACCAAACGCGAAACGAATTGCAAATTTACAATGAGAAGATACACAAATAAATAAATAAATAAATAAACAAAAATTATGAATAAAACTGACAGGCTGATGATAATGATCATGATGGTGCAGATATGGCGTTGATGCAGGTGAAGATGAAAGAGACATGTAAAACCAAGCAATAGCGCACTTATTATGGAAAAAAAACATGTAAACATTACACGTAACT]
[+] EMBL BX626710 [ATTAAAATTAGTATCCGCTCTACCAAACCTCGTGAAATTCATTTCATTCAAATTGAAACGAATGTTCCCGTTCCCCTAGAAACTCCATTTTGCACTGCGCGTCAACATCAACATTTTGATCTAGGCGGCTAGGACGGCTAGGACCTGAGCGGTAAATGAGAGGAGATTAGGTGGTGCGCCAAACACTGATTTTGGTGGGCTTAGGCATAGGAATTCAAAAAAAGGAACGTTTCTAGACAATCGATTAAATTCGGCGCACAAGCACAAGCGCAAAGGGTTTGATCTGGCCCAGGCCCTGCGTTGTAAGGGCGTAAGGGAACTGCTGACAACATTTATCCCAGCACTGGCACTGCATCTGGAACCGGTCTTTTCACTGATCCCGAACCTTAACCGTTCCTGGTAGCTACTCCCTAATATTTGAAATGGATCTGATACCGAAATCACATTTATCTTGGATCGCAACCCCTAGCGGATACCAATCCGGAATCAGACTAGCATTAAAATATGTGCATCTTGGTATATTTTAGTCAAAATCAAATCTTTCTTGAACACCACTAAAAACAATATTTGTTCTCCTTAATAACTGCAATGGTCTCCTTATTANGAAGTTAGNCCTCTGATCTCCTTCTCCTGCGTACCTCCTTTTCATTCTCTTTCCCGCGAATTTAT ]
[+] EMBL BX621426 [ tACAAGCGCAAAGGGTTTGATCTGGCCCAGGCCCTGCGTTGTAAGGGCGTAAGGGAACTGCTGACAACATTTATCCCAGCACTGGCACTGCATCTGGAACCGGTCTTTTCACTGATCCCGAACCTTAACCGTTCCTGGTAGCTAATCCCTAATATTTGAAATGGATCTGATACCGAAATCACATTTATCTTGGATCGCAACCCCTAGCGGATACCAATCCGGAATCAGACTAGCATTAAAACATGTGCATCTTGGTATATTTTAGTCAAAATCAAATCTTTCTTGAACACCACTAAAAACAATATTTGTTCTCCCTAATAACTGCAATGTTCTCCTTATTAGGAAGTTAGCCCTCTGATCTCCTTCTCCTGCGTACCTCCTTTTCATTCTCTTTCCCGCGAATTTATATAACCATATCCATAGCGGTCTAGGGACGGATTCTGAATCTATCTCAATCTAGATATCTTTTGCCAAACCTGGCCCGGAATAGATCACGGACCTATCCCGATCCAGCAACCGGTCCCATAACCATGGTTGGTCTATGAAAAGATACTATCCCTTTAAATAATTGGTCTGGAGATGATGAGTATTGAAATGTGTTTGGCAATTCATTGCGTCTTATTTGAAAAATGATTTATACTTTTCTTATTGACCCTACATGAATGCTCAAGGACCTAAGATACGCAGAACAAATATCGAACGATGTAAACCAAACGCGAAACGAATT ]
[+] EMBL BX614906 [ AGCGGATACCAATCCGGAATCAGACTAGCATTAAAACATGTGCATCTTGGTATATTTTAGTCAAAATCAAATCTTTCTTGAACACCATTAAAAACAATATTTGTTCTCCCTAATAACTGCAATGTTCTCCTTATTAGGAAGTTAGCCCTCTGATCTCCTTCTCCTGCGTACCTCCTTTTCATTCTCTTTCCCGCGAATTTATATAACCATATCCATAGCGGTCTAGGGACGGATTCTGAATCTATCTCAATCTAGATATCTTTTGCCAAACCTGGCCCGGAATAGATCACGGACCTATCCCGATCCAGCAACCGGTCCCATAACCATGGTTGGTCTATGAAAAGATACTATCCCTTTAAATAATTGGTCTGGAGATGATGAGTATTGAAATGTGTTTGGCAATTCATTGCGTCTTATTTGAAAAATGATTTATACTTTTCTTATTGACCCTACATGAATGCTCAAGGACCTAAGATACGCAGAACAAATATCGAACGATGTAAACCAAACGCGAAACGAATTGCAAATTTACAATGAGAAGATACACAAATAAATAAATAAATAAATAAACAAAAATTATGAATAAAACTGACAGGCTGATGATAATGATCATGATGGTGCAGATATGGCGTTGATGCAGGTGAAGATGAAAGAGACATGTAAAACCAAGCAATAGCGCA ]
[+] EMBL BM629871 [ ccgATTAAAACATGTGCATCTTGGTATATTTTAGTCAAAATCAAATCTTTCTTGAACACCACTAAAAACAATATTTGTTCTCCCTAATAACTGCAATGTTCTCCTTATTAGGAAGTTAGCCCTCTGATCTCCTTCTCCTGCGTACCTCCTTTTCATTCTCTTTCCCGCGAATTTATATAACCATATCCATAGCGGTCTAGGGACGGATTCTGAATCTATCTCAATCTAGATATCTTTTGCCAAACCTGGCCCGGAATAGATCACGGACCTATCCCGATCCAGCAACCGGTCCCATAACCATGGTTGGTCTATGAAAAGATACTATCCCTTTAAATAATTGGTCTGGAGATGATGAGTATTGAAATGTGTTTGGCAATTCATTGCGTCTTATTTGAAAAATGATTTATACTTTTCTTATTGACCCTACATGAATGCTCAAGGACCTAAGATACGCAGAACAAATATCGAACGATGTAAACCAAACGCGAAACGAATTGCAAATTTACAATGAGAAGATACACAAATAAATAAATAAATAAATAAACAAAAATTATGAATAAAACTGACAGGCTGATGATAATGATCATGATGGTGCAGATATGGCGTTGATGCAGGTGAAGATGAAAGAGACATGTAAAACCAAGCAATAGCGCACTTATTATGGAAAAAAAACATGTAAACATTACACGTAACT]
consensusID : consensus_6146#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 747 fasta sequence
[GAGGCAGAATCGGCACGAGGCCCGATCCAGCAACCGGTCCCATAACCATGGTTGGTCTATGAAAAGATACTATCCCTTTAAATAATTGGTCTGGAGATGATGAGTATTGAAATGTGTTTGGCAATTCATTGCGTCTTATTTGAAAAATGATTTATACTTTTCTTATTGACCCTACATGAATGCTCAAGGACCTAAGATACGCAGAACAAATATCGAACGATGTAAACCAAACGCGAAACGAATTGCAAATTTACAATGAGAAGATACACAAATAAATAAATAAATAAATAAACAAAAATTATGAATAAAACTGACAGGCTGATGATAATGATCATGATGGTGCAGATATGGCGTTGATGCAGGTGAAGATGAAAGAGACATGTAAAACCAAGCAATAGCGCACTTATTATGGAAAAAAAACATGTAAACATTACACGTAACTAGGAGCAAAGATCGAAAAGTAAAACCGAAAGCTAATGTATTGTGATAAAGAAAGTAATGTTGTTTGGCCATACATTTACTCCATGCAAAAGGAAAATGTACAAACAGATTTATTTGAGAATGATGGCTAAAAACTAAAGTCCAAGGGCAAGGCGAACGAAACTGCAAGAAGGTAAAACGTAATGATGCAGAGCAAACAGATGGAAACAGTGGGGAATAGAAGAAAGCGATAAGAACTACTCAGGAATATTNTATTGATTGGTACCCTTTAAGAGGNGNNGGAGGCNAGGAGAGAGAGGNGGCANA]
[+] EMBL BX467594 [GAGGCAGAATCGGCACGAGGCCCGATCCAGCAACCGGTCCCATAACCATGGTTGGTCTATGAAAAGATACTATCCCTTTAAATAATTGGTCTGGAGATGATGAGTATTGAAATGTGTTTGGCAATTCATTGCGTCTTATTTGAAAAATGATTTATACTTTTCTTATTGACCCTACATGAATGCTCAAGGACCTAAGATACGCAGAACAAATATCGAACGATGTAAACCAAACGCGAAACGAATTGCAAATTTACAATGAGAAGATACACAAATAAATAAATAAATAAATAAACAAAAATTATGAATAAAACTGACAGGCTGATGATAATGATCATGATGGTGCAGATATGGCGTTGATGCAGGTGAAGATGAAAGAGACATGTAAAACCAAGCAATAGCGCACTTATTATGGAAAAAAAACATGTAAACATTACACGTAACTAGGAGCAAAGATCGAAAAGTAAAACCGAAAGCTAATGTATTGTGATAAAGAAAGTAATGTTGTTTGGCCATACATTTACTCCATGCAAAAGGAAAATGTACAAACAGATTTATTTGAGAATGATGGCTAAAAACTAAAGTCCAAGGGCAAGGCGAACGAAACTGCAAGAAGGTAAAACGTAATGATGCAGAGCAAACAGATGGAAACAGTGGGGAATAGAAGAAAGCGATAAGAACTACTCAGGAATATTNTATTGATTGGTACCCTTTAAGAGGNGNNGGAGGCNAGGAGAGAGAGGNGGCANA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6146#0 ATTAAAATTAGTATCCGCTCTACCAAACCTCGTGAAATTCATTTCATTCAAATTGAAACG 60
consensus_6146#1 ------------------------------------------------------------
consensus_6146#0 AATGTTCCCGTTCCCCTAGAAACTCCATTTTGCACTGCGCGTCAACATCAACATTTTGAT 120
consensus_6146#1 ------------------------------------------------------------
consensus_6146#0 CTAGGCGGCTAGGACGGCTAGGACCTGAGCGGTAAATGAGAGGAGATTAGGTGGTGCGCC 180
consensus_6146#1 ------------------------------------------------------------
consensus_6146#0 AAACACTGATTTTGGTGGGCTTAGGCATAGGAATTCAAAAAAAGGAACGTTTCTAGACAA 240
consensus_6146#1 ------------------------------------------------------------
consensus_6146#0 TCGATTAAATTCGGCGCACAAGCACAAGCGCAAAGGGTTTGATCTGGCCCAGGCCCTGCG 300
consensus_6146#1 ------------------------------------------------------------
consensus_6146#0 TTGTAAGGGCGTAAGGGAACTGCTGACAACATTTATCCCAGCACTGGCACTGCATCTGGA 360
consensus_6146#1 ------------------------------------------------------------
consensus_6146#0 ACCGGTCTTTTCACTGATCCCGAACCTTAACCGTTCCTGGTAGCTACTCCCTAATATTTG 420
consensus_6146#1 ------------------------------------------------------------
consensus_6146#0 AAATGGATCTGATACCGAAATCACATTTATCTTGGATCGCAACCCCTAGCGGATACCAAT 480
consensus_6146#1 ------------------------------------------------------------
consensus_6146#0 CCGGAATCAGACTAGCATTAAAACATGTGCATCTTGGTATATTTTAGTCAAAATCAAATC 540
consensus_6146#1 ------------------------------------------------------------
consensus_6146#0 TTTCTTGAACACCACTAAAAACAATATTTGTTCTCCCTAATAACTGCAATGTTCTCCTTA 600
consensus_6146#1 ------------------------------------------------------------
consensus_6146#0 TTAGGAAGTTAGCCCTCTGATCTCCTTCTCCTGCGTACCTCCTTTTCATTCTCTTTCCCG 660
consensus_6146#1 ------------------------------------------------------------
consensus_6146#0 CGAATTTATATAACCATATCCATAGCGGTCTAGGGACGGATTCTGAATCTATCTCAATCT 720
consensus_6146#1 ------------------------------------------------------------
consensus_6146#0 AGATATCTTTTGCCAAACCTGGCCCGGAATAGATCACGGACCTATCCCGATCCAGCAACC 780
consensus_6146#1 -------------------------GAGGCAGAATCGGCACGAGGCCCGATCCAGCAACC 35
* *** * ** ***************
consensus_6146#0 GGTCCCATAACCATGGTTGGTCTATGAAAAGATACTATCCCTTTAAATAATTGGTCTGGA 840
consensus_6146#1 GGTCCCATAACCATGGTTGGTCTATGAAAAGATACTATCCCTTTAAATAATTGGTCTGGA 95
************************************************************
consensus_6146#0 GATGATGAGTATTGAAATGTGTTTGGCAATTCATTGCGTCTTATTTGAAAAATGATTTAT 900
consensus_6146#1 GATGATGAGTATTGAAATGTGTTTGGCAATTCATTGCGTCTTATTTGAAAAATGATTTAT 155
************************************************************
consensus_6146#0 ACTTTTCTTATTGACCCTACATGAATGCTCAAGGACCTAAGATACGCAGAACAAATATCG 960
consensus_6146#1 ACTTTTCTTATTGACCCTACATGAATGCTCAAGGACCTAAGATACGCAGAACAAATATCG 215
************************************************************
consensus_6146#0 AACGATGTAAACCAAACGCGAAACGAATTGCAAATTTACAATGAGAAGATACACAAATAA 1020
consensus_6146#1 AACGATGTAAACCAAACGCGAAACGAATTGCAAATTTACAATGAGAAGATACACAAATAA 275
************************************************************
consensus_6146#0 ATAAATAAATAAATAAACAAAAATTATGAATAAAACTGACAGGCTGATGATAATGATCAT 1080
consensus_6146#1 ATAAATAAATAAATAAACAAAAATTATGAATAAAACTGACAGGCTGATGATAATGATCAT 335
************************************************************
consensus_6146#0 GATGGTGCAGATATGGCGTTGATGCAGGTGAAGATGAAAGAGACATGTAAAACCAAGCAA 1140
consensus_6146#1 GATGGTGCAGATATGGCGTTGATGCAGGTGAAGATGAAAGAGACATGTAAAACCAAGCAA 395
************************************************************
consensus_6146#0 TAGCGCACTTATTATGGAAAAAAAACATGTAAACATTACACGTAACT------------- 1187
consensus_6146#1 TAGCGCACTTATTATGGAAAAAAAACATGTAAACATTACACGTAACTAGGAGCAAAGATC 455
***********************************************
consensus_6146#0 ------------------------------------------------------------
consensus_6146#1 GAAAAGTAAAACCGAAAGCTAATGTATTGTGATAAAGAAAGTAATGTTGTTTGGCCATAC 515
consensus_6146#0 ------------------------------------------------------------
consensus_6146#1 ATTTACTCCATGCAAAAGGAAAATGTACAAACAGATTTATTTGAGAATGATGGCTAAAAA 575
consensus_6146#0 ------------------------------------------------------------
consensus_6146#1 CTAAAGTCCAAGGGCAAGGCGAACGAAACTGCAAGAAGGTAAAACGTAATGATGCAGAGC 635
consensus_6146#0 ------------------------------------------------------------
consensus_6146#1 AAACAGATGGAAACAGTGGGGAATAGAAGAAAGCGATAAGAACTACTCAGGAATATTNTA 695
consensus_6146#0 ----------------------------------------------------
consensus_6146#1 TTGATTGGTACCCTTTAAGAGGNGNNGGAGGCNAGGAGAGAGAGGNGGCANA 747
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||