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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6150#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1019 fasta sequence
[AGAATTGCCCCGACGGTTTAACTGATCGCCTTCACTTACCNTCCTTGTAACGTGGTGATGCCGGGCGACTCAACCGTAACCTCCAAACTTGGGCAACACATACTCATCCACTTCAAACACTTTATTGTGTTTCGATCCCAGCACTTCCACGTTGATGGTCCACGCGACCCAGCACCGGGGACGGTCGAGAGGGTTAGCTACCGACTCAAACACACCCTNTCACCAGCTTGCCCTACCTTCCACTGCTTGATGCGGTNTCGCCTTAGCGTCGTNCAAATGTGCACGCTAATGTAGTACCGCCTTCTGGAGGGGTNTNGGTNGTANCGGGTCGAGTACCAGCACACGGAATCGCACCGTAATCGCCCGGCTTGTAGATGGATTAGTNCCGTATTGCACAAATACCGAGAAGCTCTTCTGCTGATACTCCAAATCGGTATATCGTTCATTAAAGGTTAGGCCCGATAACCCTTCGGCGA-CAGCTTGTACGACGACTCGGGAATATCACCAATAGCGAACGGTACCAGCCGCGTTTCACCGGTGTTCAGCGTAATCTCCTGTTTGGCGATCACGCTGCTTGCATCCGTAATGGCAAGGCTGAAACGGATCGG--TTCGCTCACATCCTGGTTCGTTACCGCTACATGGTGCTCGGAGTTGGGCCGAAGCAGCTTCGCACCCACGATCGA-GTAGTGGCCCTCA-CACTGCACCGCTGGTACAAGCGCTACACTCAGCACCAGACACACTGCCAGCAGCGACGAAGACGATGTCGACAGGATCCGGATCGCCGGGTCCTTCTTCGATGCGAACATCGTTGAACGTCGCATAACGCTATGCGACCTTAAGCCTTAGCTTCTCGCGACACAAATCAGGCTTTCCTTTGTGCACTGTGCCAACGGTATTGGGCAAACGAAATCAGTTCTACGAAGCTACTACTGTTAACACACAACAATCACAAGCGCTACAATAGAAAAAATCACTGATGCACAGCGTCACCCCTGGCACCGATCGGTTCGGTAGT-GCGG]
[+] EMBL AL693210 [AGAATTGCCCCGACGGTTTAACTGATCGCCTTCACTTACCNTCCTTGTAACGTGGTGATGCCGGGCGACTCAACCGTAACCTCCAAACTTGGGCAACACATACTCATCCACTTCAAACACTTTATTGTGTTTCGATCCCAGCACTTCCACGTTGATGGTCCACGCGACCCAGCACCGGGGACGGTCGAGAGGGTTAGCTACCGACTCAAACACACCCTNTCACCAGCTTGCCCTACCTTCCACTGCTTGATGCGGTNTCGCCTTAGCGTCGTNCAAATGTGCACGCTAATGTAGTACCGCCTTCTGGAGGGGTNTNGGTNGTANCGGGTCGAGTACCAGCACACGGAATCGCACCGTAATCGCCCGGCTTGTAGATGGATTAGTNCCGTATTGCACAAATACCGAGAAGCTCTTCTGCTGATACTCCAAATCGGTATATCGTTCATTAAAGGTTAGGCCCGATAACCCTTCGGCGA CAGCTTGTACGACGACTCGGGAATATCACCAATAGCGAACGGTACCAGCCGCGTTTCACCGGTGTTCAGCGTAATCTCCTGTNTGGCGATCACGCTGCTTGCATCCGTAATGGNAAGGCTGAAACGGATCGGANTNCGCTCACATCCT GTTCGTTAACGCTACATGGTGCTCGGAGTTGGGCCGAAGCAGCTNCGAACCCACGATCGANNTAGTGGCCCTCANCACTGCACCG TGGTACAAGCGCct ]
[-] EMBL BM635752 [ CTTGTAGATGGATTTGT CCGT TTGCACAAATACCGAGAAGCTCTTCTGCTGATACTCCAAATCGGT T TCGTTC TTAAAGGTTAGGCCCGATAACCCTTCGGCGACCAGCTTGTACGACGACTCGGGAATATCACCAATAGCGAACGGTACGAGCCGCGTTTCACCGGTGTTCAGCGTAATCTCCTGTTTGGCGATCACGCTGCTTGCATCCGTAATGGCAAGGCTGAAACGGATCGG TTCGCTCACATCCTGGTTAGTTACCGCTACATGGTACTCGGAGTTGGGCCGGAGCAGTTTCGCACCCACGATCGA GTAGTGGCCCTCA CACTGCACCGCTGGTACAAGCACTACACTCAGCACCAGACACACTGCCAGCAGCGACGAAGACGATGTCGACAGGATCCGGATCGCCGGGTCCTTCTTCGATGCGAACATCGTTGAACGTCGCATAACGCTATGCGACCTTAAGCCTTAGCTTCTCGCGACACAAATCAGGCTTTCCTTTGTGCACTGTGCCAACGGTATTGGGCAAACGATATCAGTTCTACGAAGCTACTACTGTTAACACACAACAATCACAAGCGCTACAATAGAAAAAATCACTGATGCACAGCGTCACCCCTGGCACCGATCGGTTCGGTcgg acgc]
[-] EMBL BM580443 [ ACTCGGGAATATCACCAATAGCGAACGGTACCAGCCGCGTTTCACCGGTGTTCAGCGTAATCTCCTGTTTGGCGATCACGCTGCTTGCATCCGTAATGGCAAGGCTGAAACGGATCGG TTCGCTCACATCCTGGTTCGTTACCGCTACATGGTGCTCGGAGTTGGGCCGAAGCAGCTTCGCACCCACGATCGA GTAGTGGCCCTCA CACTGCACCGCTGGTACAAGCGCTACACTCAGCACCAGACACACTGCCAGCAGCGACGAAGACGATGTCGACAGGATCCGGATCGCCGGGTCCTTCTTCGATGCGAACGTCGTTGAACGTCGCATAACGCTATGCGACCTTAAGCCTTAGCTTCTCGCGACACAAATCAGGCTTTCCTTTGTGCACTGTGCCAACGGTATTGGGCAAACGAAATCAGTTCTACGAAGCTACTACTGTTAACACACAACAATCACAAGCGCTACAATAGAAAAAATCACTGATGCACAGCGTCACCCCTGGCACCGATCGGTTCGGTAGT GCGG]
[-] EMBL BM650551 [ TCGCTCACATCCTGGTTCGTTACCGCTACATGGTACTCGGAGTTAGGCCGGAGCAGTTTCGCACCCACGATCGA GTAGTGGCCCTCA CACTGCACCGCTGGTACAAGCACTACACTCAGCACCAGACACACTGCCAGCAGCGACGAAGACGATGTCGACAGGATCCGGATCGCCGGGTCCTTCTTCGATGCGAACATCGTTGAACGTCGCATAACGCTATGCGACCTTAAGCCTTAGCTTCTCGCGACACAAATCAGGCTTTCCTTTGTGCACTGTGCCAACGGTATTGGGCAAACGAAATCAGTTCTACGAAGCTACTACTGTTAACACACAACAATCACAAGCG AATAGAAAAAGTCACTGATGCACAGCGTCACCCCTGGCACCGATCGGTTCGGTAGTGGCGG]
consensusID : consensus_6150#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 607 fasta sequence
[AGCTCTTCTGCTGATACTCCAAATCGGTTTCGTTCTTAAAGGTTAGGCCCGATAACCCTTCGGCGACCAGCTTGTACGACGACTCGGGAATATCACCAATAGCGAACGGTACGAGCCGCGTTTCACCGGTGTTCAGCGTAATCTCCTGTTTGGCGATCACGCTGCTTGCATCCGTAATGGCAAGGCTGAAACGGATCGGTTCGCTCACATCCTGGTTAGTTACCGCTACATGGTACTCGGAGTTGGGCCGGAGCAGTTTCGCACCCACGATCGAGTAGTGGCCCTCACACTGCACCGCTGGTACAAGCACTACACTCAGCACCAGACACACTGCCAGCAGCGACGAAGACGATGTCGACAGGATCCGGATCGCCGGGTCCTTCTTCGATGCGAACATCGTTGAACGTCGCATAACGCTATGCGACCTTAAGCCTTAGCTTCTCGCGACACAAATCAGGCTTTCCTTTGTGCACTGTGCCAACGGTATTGGGCAAACGATATCAGTTCTACGAAGCTACTACTGTTAACACACAACAATCACAAGCGCTACAATAGAAAAAATCACTGATGCACAGCGTCACCCCTGGCACCGCCCACGCGTCCGCGG]
[-] EMBL BM595791 [AGCTCTTCTGCTGATACTCCAAATCGGTTTCGTTCTTAAAGGTTAGGCCCGATAACCCTTCGGCGACCAGCTTGTACGACGACTCGGGAATATCACCAATAGCGAACGGTACGAGCCGCGTTTCACCGGTGTTCAGCGTAATCTCCTGTTTGGCGATCACGCTGCTTGCATCCGTAATGGCAAGGCTGAAACGGATCGGTTCGCTCACATCCTGGTTAGTTACCGCTACATGGTACTCGGAGTTGGGCCGGAGCAGTTTCGCACCCACGATCGAGTAGTGGCCCTCACACTGCACCGCTGGTACAAGCACTACACTCAGCACCAGACACACTGCCAGCAGCGACGAAGACGATGTCGACAGGATCCGGATCGCCGGGTCCTTCTTCGATGCGAACATCGTTGAACGTCGCATAACGCTATGCGACCTTAAGCCTTAGCTTCTCGCGACACAAATCAGGCTTTCCTTTGTGCACTGTGCCAACGGTATTGGGCAAACGATATCAGTTCTACGAAGCTACTACTGTTAACACACAACAATCACAAGCGCTACAATAGAAAAAATCACTGATGCACAGCGTCACCCCTGGCACCGCCCACGCGTCCGCGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6150#0 AGAATTGCCCCGACGGTTTAACTGATCGCCTTCACTTACCNTCCTTGTAACGTGGTGATG 60
consensus_6150#1 ------------------------------------------------------------
consensus_6150#0 CCGGGCGACTCAACCGTAACCTCCAAACTTGGGCAACACATACTCATCCACTTCAAACAC 120
consensus_6150#1 ------------------------------------------------------------
consensus_6150#0 TTTATTGTGTTTCGATCCCAGCACTTCCACGTTGATGGTCCACGCGACCCAGCACCGGGG 180
consensus_6150#1 ------------------------------------------------------------
consensus_6150#0 ACGGTCGAGAGGGTTAGCTACCGACTCAAACACACCCTNTCACCAGCTTGCCCTACCTTC 240
consensus_6150#1 ------------------------------------------------------------
consensus_6150#0 CACTGCTTGATGCGGTNTCGCCTTAGCGTCGTNCAAATGTGCACGCTAATGTAGTACCGC 300
consensus_6150#1 ------------------------------------------------------------
consensus_6150#0 CTTCTGGAGGGGTNTNGGTNGTANCGGGTCGAGTACCAGCACACGGAATCGCACCGTAAT 360
consensus_6150#1 ------------------------------------------------------------
consensus_6150#0 CGCCCGGCTTGTAGATGGATTAGTNCCGTATTGCACAAATACCGAGAAGCTCTTCTGCTG 420
consensus_6150#1 -----------------------------------------------AGCTCTTCTGCTG 13
*************
consensus_6150#0 ATACTCCAAATCGGTATATCGTTCATTAAAGGTTAGGCCCGATAACCCTTCGGCGAC-AG 479
consensus_6150#1 ATACTCCAAATCGGTTT--CGTTC-TTAAAGGTTAGGCCCGATAACCCTTCGGCGACCAG 70
*************** * ***** ******************************** **
consensus_6150#0 CTTGTACGACGACTCGGGAATATCACCAATAGCGAACGGTACCAGCCGCGTTTCACCGGT 539
consensus_6150#1 CTTGTACGACGACTCGGGAATATCACCAATAGCGAACGGTACGAGCCGCGTTTCACCGGT 130
****************************************** *****************
consensus_6150#0 GTTCAGCGTAATCTCCTGTTTGGCGATCACGCTGCTTGCATCCGTAATGGCAAGGCTGAA 599
consensus_6150#1 GTTCAGCGTAATCTCCTGTTTGGCGATCACGCTGCTTGCATCCGTAATGGCAAGGCTGAA 190
************************************************************
consensus_6150#0 ACGGATCGGTTCGCTCACATCCTGGTTCGTTACCGCTACATGGTGCTCGGAGTTGGGCCG 659
consensus_6150#1 ACGGATCGGTTCGCTCACATCCTGGTTAGTTACCGCTACATGGTACTCGGAGTTGGGCCG 250
*************************** **************** ***************
consensus_6150#0 AAGCAGCTTCGCACCCACGATCGAGTAGTGGCCCTCACACTGCACCGCTGGTACAAGCGC 719
consensus_6150#1 GAGCAGTTTCGCACCCACGATCGAGTAGTGGCCCTCACACTGCACCGCTGGTACAAGCAC 310
***** *************************************************** *
consensus_6150#0 TACACTCAGCACCAGACACACTGCCAGCAGCGACGAAGACGATGTCGACAGGATCCGGAT 779
consensus_6150#1 TACACTCAGCACCAGACACACTGCCAGCAGCGACGAAGACGATGTCGACAGGATCCGGAT 370
************************************************************
consensus_6150#0 CGCCGGGTCCTTCTTCGATGCGAACATCGTTGAACGTCGCATAACGCTATGCGACCTTAA 839
consensus_6150#1 CGCCGGGTCCTTCTTCGATGCGAACATCGTTGAACGTCGCATAACGCTATGCGACCTTAA 430
************************************************************
consensus_6150#0 GCCTTAGCTTCTCGCGACACAAATCAGGCTTTCCTTTGTGCACTGTGCCAACGGTATTGG 899
consensus_6150#1 GCCTTAGCTTCTCGCGACACAAATCAGGCTTTCCTTTGTGCACTGTGCCAACGGTATTGG 490
************************************************************
consensus_6150#0 GCAAACGAAATCAGTTCTACGAAGCTACTACTGTTAACACACAACAATCACAAGCGCTAC 959
consensus_6150#1 GCAAACGATATCAGTTCTACGAAGCTACTACTGTTAACACACAACAATCACAAGCGCTAC 550
******** ***************************************************
consensus_6150#0 AATAGAAAAAATCACTGATGCACAGCGTCACCCCTGGCACCGATCGGTTCGGTAGTGCGG 1019
consensus_6150#1 AATAGAAAAAATCACTGATGCACAGCGTCACCCCTGGCACCGCCCA---CGCGTCCGCGG 607
****************************************** * ** ****
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||