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Anopheles gambiae
cluster # 6299 cluster # 6299       Sequences # 5       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6299#0 length = 931 sequences # 1  
consensus_6299#1 length = 864 sequences # 2  
consensus_6299#2 length = 797 sequences # 1  
consensus_6299#3 length = 606 sequences # 1  

consensusID : consensus_6299#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 931
fasta sequence
                              [GCAGAATCCCCCGAGTTATGAGTGGAAGTACACGAACNCAATAACATGGAATGATAACCTATGCAACCAATGGGTAACGTAGGAAATCATTCATCGCATAGTACTAGCGGAAACCTTATGGCATATGTCATACGCAAAACCCTGGTGTACAATCAAATATCAATACAATGCACGCACAGCAACCTCCATCGATGCCCAATGCAAATGGAATCAATGCACAACCAAATTGGCAGTACGATTGCTACGCCACTACTTTAGCCTATATTTCGAGTCAACGGCGGAACCATTATTTTGTAACAGTACCACCACGANCACAGCGAGTGCTACATTCTGACGCATATNTANANNNTACTATAGAGAGGCTTCAANACNGAAATCAACATATATAACGCCGTGGCNAACAAACGTTCACAGCACCGAANAACGAATCACATTCCTAATACTGACTGTCAACAGACTATCCATCACAGCTGGCTAGGTAAACCGTGGTCAAGATCGCCCCGAGGTTGTAACTTGACTGCTTTATAGGGATTNTGCGCAACACTTTCACTGACTGAAAGCATGTNATACAAANTCNGATCGTAACACATAAACATTATCCCANTACTAACTTGGTAACTGTTCAACCTGCTAANACATAANTNNATTCTCCCAACCCNCTTCNACTNAATATCTCCNACAATAAACAACAACACACTTGACACCTAACTTCTCCGGNNTACNACAACCNNAACCCTNCNAACCCAATTACTTTCATCCCCCTAACACTTACTANTACANTAACTATCCGCTCACCCNCTCCACCCACATCTCAAACGCAGCTAANCCANACTCCTCCCCTTCCCCTCGGCTCATTGTCTCACCCCCCTCTCCCTTCNTCTCNACCTCNCCGCCACTCCGACACCAACTAACTCTTNTCNCCCTCCGCCAC]

[+] EMBL AL692683             [GCAGAATCCCCCGAGTTATGAGTGGAAGTACACGAACNCAATAACATGGAATGATAACCTATGCAACCAATGGGTAACGTAGGAAATCATTCATCGCATAGTACTAGCGGAAACCTTATGGCATATGTCATACGCAAAACCCTGGTGTACAATCAAATATCAATACAATGCACGCACAGCAACCTCCATCGATGCCCAATGCAAATGGAATCAATGCACAACCAAATTGGCAGTACGATTGCTACGCCACTACTTTAGCCTATATTTCGAGTCAACGGCGGAACCATTATTTTGTAACAGTACCACCACGANCACAGCGAGTGCTACATTCTGACGCATATNTANANNNTACTATAGAGAGGCTTCAANACNGAAATCAACATATATAACGCCGTGGCNAACAAACGTTCACAGCACCGAANAACGAATCACATTCCTAATACTGACTGTCAACAGACTATCCATCACAGCTGGCTAGGTAAACCGTGGTCAAGATCGCCCCGAGGTTGTAACTTGACTGCTTTATAGGGATTNTGCGCAACACTTTCACTGACTGAAAGCATGTNATACAAANTCNGATCGTAACACATAAACATTATCCCANTACTAACTTGGTAACTGTTCAACCTGCTAANACATAANTNNATTCTCCCAACCCNCTTCNACTNAATATCTCCNACAATAAACAACAACACACTTGACACCTAACTTCTCCGGNNTACNACAACCNNAACCCTNCNAACCCAATTACTTTCATCCCCCTAACACTTACTANTACANTAACTATCCGCTCACCCNCTCCACCCACATCTCAAACGCAGCTAANCCANACTCCTCCCCTTCCCCTCGGCTCATTGTCTCACCCCCCTCTCCCTTCNTCTCNACCTCNCCGCCACTCCGACACCAACTAACTCTTNTCNCCCTCCGCCAC]


>consensus_6299#0 GCAGAATCCCCCGAGTTATGAGTGGAAGTACACGAACNCAATAACATGGAATGATAACCT ATGCAACCAATGGGTAACGTAGGAAATCATTCATCGCATAGTACTAGCGGAAACCTTATG GCATATGTCATACGCAAAACCCTGGTGTACAATCAAATATCAATACAATGCACGCACAGC AACCTCCATCGATGCCCAATGCAAATGGAATCAATGCACAACCAAATTGGCAGTACGATT GCTACGCCACTACTTTAGCCTATATTTCGAGTCAACGGCGGAACCATTATTTTGTAACAG TACCACCACGANCACAGCGAGTGCTACATTCTGACGCATATNTANANNNTACTATAGAGA GGCTTCAANACNGAAATCAACATATATAACGCCGTGGCNAACAAACGTTCACAGCACCGA ANAACGAATCACATTCCTAATACTGACTGTCAACAGACTATCCATCACAGCTGGCTAGGT AAACCGTGGTCAAGATCGCCCCGAGGTTGTAACTTGACTGCTTTATAGGGATTNTGCGCA ACACTTTCACTGACTGAAAGCATGTNATACAAANTCNGATCGTAACACATAAACATTATC CCANTACTAACTTGGTAACTGTTCAACCTGCTAANACATAANTNNATTCTCCCAACCCNC TTCNACTNAATATCTCCNACAATAAACAACAACACACTTGACACCTAACTTCTCCGGNNT ACNACAACCNNAACCCTNCNAACCCAATTACTTTCATCCCCCTAACACTTACTANTACAN TAACTATCCGCTCACCCNCTCCACCCACATCTCAAACGCAGCTAANCCANACTCCTCCCC TTCCCCTCGGCTCATTGTCTCACCCCCCTCTCCCTTCNTCTCNACCTCNCCGCCACTCCG ACACCAACTAACTCTTNTCNCCCTCCGCCAC



consensusID : consensus_6299#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 864
fasta sequence
                              [CCGCCCACGCGTCCGGCATTGCATTGCTGAAGGTGTAGGATGTGTTTACAAGTCCTTCGTAGCGCCAACTGAACAAGAATTTATCTGTATCTGGAGAAATTGTGTACGACTTCGACGAAATATGCCTCCTTTTCCATCTGTTACACGACTTGTGAAACATGTCAAAGAAGTACATCTAACGAAAGGAGTTAGCAAATTAATTCAACCGCAGGACCGTAGCAAAAACTACGTACATTCTAAGCGCTTTACATCCGGCATACAGATTGGAAATAATGCAGGAATGAGTGGAAGTAACACGAACACCAATAACATCGGAATGATAACCTTGCAACCAATGGGTAACGTAGGAAATCATTCATCGCATAGTACTAGCGGAAACCTTATGGCATTGTCATCGCAAAACCCTGGTGTCAATCAAATTCA-ATCAATGCACGCACAGCAACCTCCATCGATGCCCAATGCAAATGGAATCAATGCACAACAAATTGGCAGTACGATTGCTACGCCATACTTTAGCTATATTTCGAGTCAACCGGCGGAACCATTATTTGTAACAGTACCACCACGACCACAGCGAGTGCTACATTCTGACGCATATATAAAATATATAGAGAGGCTTCAACAGAAATCAACATATATAACGCCGTGGCAAAAAACGTTCACAGCAAGAAAAGAATCAATTCCTAATACTGATGTCAACAGACTTCCATCACAGTGGCTAGGTAAACGTGGTCAAGATCGCCCCGAGGTTGTAATTGATGCTTTATGGGATTTGCGAAATNTCATGATGAAAGATGTTATACAATTTGATCGTTTTTAAACATTATCCATTTTACTGTAGTGTCAACTGCTAAAATAAGTTAT]

[+] EMBL BM595008             [CCGCCCACGCGTCCGGCATTGCATTGCTGAAGGTGTAGGATGTGTTTACAAGTCCTTCGTAGCGCCAACTGAACAAGAATTTATCTGTATCTGGAGAAATTGTGTACGACTTCGACGAAATATGCCTCCTTTTCCATCTGTTACACGACTTGTGAAACATGTCAAAGAAGTACATCTAACGAAAGGAGTTAGCAAATTAATTCAACCGCAGGACCGTAGCAAAAACTACGTACATTCTAAGCGCTTTACATCCGGCATACAGATTGGAAATAATGCAGGAATGAGTGGAAGTAACACGAACACCAATAACATCGGAATGATAACCTTGCAACCAATGGGTAACGTAGGAAATCATTCATCGCATAGTACTAGCGGAAACCTTATGGCATTGTCATCGCAAAACCCTGGTGTCAATCAAATTCA ATCAATGCACGCACAGCAACCTCCATCGATGCCCAATGCAAATGGAATCAATGCACAACAAATTGGCAGTACGATTGCTACGCCATACTTTAGCTATATTTCGAGTCAACCGGCGGAACCATTATTTGTAACAGTACCACCACGACCACAGCGAGTGCTACATTCTGACGCATATATAAAATATATAGAGAGGCTTCAACAGAAATCAACATATATAACGCCGTGGCAAAAAACG                                                                                                                                                                                                              ]
[+] EMBL BX619802             [                                                                                                                                                                                                                                                                                                     ggACGAACACCAATAACATCGGAATGATAACCTTGCAACCAATGGGTAACGTAGGAAATCATTCATCGCATAGTACTAGCGGAAACCTTATGGCATTGTCATCGCAAAACCCTGGTGTCAATCAAATTCANATCAATGCACGCACAGCAACCTCCATCGATGCCCAATGCAAATGGAATCAATGCACAACAAATTGGCAGTACGATTGCTACGCCATACTTTAGCTATATTTCGAGTCAACCGGCGGAACCATTATTTGTAACAGTACCACCACGACCACAGCGAGTGCTACATTCTGACGCATATATAAAATATATAGAGAGGCTTCAACAGAAATCAACATATATAACGCCGTGGCAAAAAACGTTCACAGCAAGAAAAGAATCAATTCCTAATACTGATGTCAACAGACTTCCATCACAGTGGCTAGGTAAACGTGGTCAAGATCGCCCCGAGGTTGTAATTGATGCTTTATGGGATTTGCGAAATNTCATGATGAAAGATGTTATACAATTTGATCGTTTTTAAACATTATCCATTTTACTGTAGTGTCAACTGCTAAAATAAGTTAT]


>consensus_6299#1 CCGCCCACGCGTCCGGCATTGCATTGCTGAAGGTGTAGGATGTGTTTACAAGTCCTTCGT AGCGCCAACTGAACAAGAATTTATCTGTATCTGGAGAAATTGTGTACGACTTCGACGAAA TATGCCTCCTTTTCCATCTGTTACACGACTTGTGAAACATGTCAAAGAAGTACATCTAAC GAAAGGAGTTAGCAAATTAATTCAACCGCAGGACCGTAGCAAAAACTACGTACATTCTAA GCGCTTTACATCCGGCATACAGATTGGAAATAATGCAGGAATGAGTGGAAGTAACACGAA CACCAATAACATCGGAATGATAACCTTGCAACCAATGGGTAACGTAGGAAATCATTCATC GCATAGTACTAGCGGAAACCTTATGGCATTGTCATCGCAAAACCCTGGTGTCAATCAAAT TCAATCAATGCACGCACAGCAACCTCCATCGATGCCCAATGCAAATGGAATCAATGCACA ACAAATTGGCAGTACGATTGCTACGCCATACTTTAGCTATATTTCGAGTCAACCGGCGGA ACCATTATTTGTAACAGTACCACCACGACCACAGCGAGTGCTACATTCTGACGCATATAT AAAATATATAGAGAGGCTTCAACAGAAATCAACATATATAACGCCGTGGCAAAAAACGTT CACAGCAAGAAAAGAATCAATTCCTAATACTGATGTCAACAGACTTCCATCACAGTGGCT AGGTAAACGTGGTCAAGATCGCCCCGAGGTTGTAATTGATGCTTTATGGGATTTGCGAAA TNTCATGATGAAAGATGTTATACAATTTGATCGTTTTTAAACATTATCCATTTTACTGTA GTGTCAACTGCTAAAATAAGTTAT



consensusID : consensus_6299#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 797
fasta sequence
                              [CGGAAGCAACGTTCGGTGACGTATCACGAATAGTCGGAAACGAGTGGCGTAATTTGAGCGATCAAGAGAAGACTATATGGGAGCAGCGCGCCATTAAAATGAATGAAGAAAGCGCAGCAAAACATGCAGCTGAAATGGGTGAATCAAATTGTCCCAGCCCAGCGAACCTCAAGACCGAGAGTCCAATCATTCAGGACATCATAACCAATCATGCGTATGAGTGCTGTTGGGATAAATGTGACTTTCAGTTTGAGGATCCCGCGGAATTCTCTGAGCATTGCATTGCTGAAGGTGTAGGATGTGTTTACAAGTCCTTCGTAGCGCCAACTGAACAAGAATTTATCTGTATCTGGAGAAATTGTGTACGACTTCGACGAAATATGCCTCCTTTTCCATCTGTTACACGACTTGTGAAACATGTCAAAGAAGTACATCTAACGAAAGGAGTTAGCAAATTAATTCAACCGCAGGACCGTAGCAAAAACTACGTACATTCTAAGCGCTTTACATCCGGCATACAGATTGGAAATAATGCAGGAATGAGTGGAAGTAACACGAACACCAATAACATCGGAATGATAACCTTGCAACCAATGGGTAACGTANGAAATCATTCATCGCATAGTACTAGCGGAAACCTTATGGCATTGTCATCGCAAAACCCTGGTGTCAATCAAATTCAATCNATGCACGCACAGCAACCTCCATCGATTGAATTTGATTGAGGTTGCTGTGCGTGCATTGATTGAATTCAATCGATGGAGGTTGCTGTGCGTGCATTGATGNCCCATGCAATG]

[+] EMBL BX624718             [CGGAAGCAACGTTCGGTGACGTATCACGAATAGTCGGAAACGAGTGGCGTAATTTGAGCGATCAAGAGAAGACTATATGGGAGCAGCGCGCCATTAAAATGAATGAAGAAAGCGCAGCAAAACATGCAGCTGAAATGGGTGAATCAAATTGTCCCAGCCCAGCGAACCTCAAGACCGAGAGTCCAATCATTCAGGACATCATAACCAATCATGCGTATGAGTGCTGTTGGGATAAATGTGACTTTCAGTTTGAGGATCCCGCGGAATTCTCTGAGCATTGCATTGCTGAAGGTGTAGGATGTGTTTACAAGTCCTTCGTAGCGCCAACTGAACAAGAATTTATCTGTATCTGGAGAAATTGTGTACGACTTCGACGAAATATGCCTCCTTTTCCATCTGTTACACGACTTGTGAAACATGTCAAAGAAGTACATCTAACGAAAGGAGTTAGCAAATTAATTCAACCGCAGGACCGTAGCAAAAACTACGTACATTCTAAGCGCTTTACATCCGGCATACAGATTGGAAATAATGCAGGAATGAGTGGAAGTAACACGAACACCAATAACATCGGAATGATAACCTTGCAACCAATGGGTAACGTANGAAATCATTCATCGCATAGTACTAGCGGAAACCTTATGGCATTGTCATCGCAAAACCCTGGTGTCAATCAAATTCAATCNATGCACGCACAGCAACCTCCATCGATTGAATTTGATTGAGGTTGCTGTGCGTGCATTGATTGAATTCAATCGATGGAGGTTGCTGTGCGTGCATTGATGNCCCATGCAATG]


>consensus_6299#2 CGGAAGCAACGTTCGGTGACGTATCACGAATAGTCGGAAACGAGTGGCGTAATTTGAGCG ATCAAGAGAAGACTATATGGGAGCAGCGCGCCATTAAAATGAATGAAGAAAGCGCAGCAA AACATGCAGCTGAAATGGGTGAATCAAATTGTCCCAGCCCAGCGAACCTCAAGACCGAGA GTCCAATCATTCAGGACATCATAACCAATCATGCGTATGAGTGCTGTTGGGATAAATGTG ACTTTCAGTTTGAGGATCCCGCGGAATTCTCTGAGCATTGCATTGCTGAAGGTGTAGGAT GTGTTTACAAGTCCTTCGTAGCGCCAACTGAACAAGAATTTATCTGTATCTGGAGAAATT GTGTACGACTTCGACGAAATATGCCTCCTTTTCCATCTGTTACACGACTTGTGAAACATG TCAAAGAAGTACATCTAACGAAAGGAGTTAGCAAATTAATTCAACCGCAGGACCGTAGCA AAAACTACGTACATTCTAAGCGCTTTACATCCGGCATACAGATTGGAAATAATGCAGGAA TGAGTGGAAGTAACACGAACACCAATAACATCGGAATGATAACCTTGCAACCAATGGGTA ACGTANGAAATCATTCATCGCATAGTACTAGCGGAAACCTTATGGCATTGTCATCGCAAA ACCCTGGTGTCAATCAAATTCAATCNATGCACGCACAGCAACCTCCATCGATTGAATTTG ATTGAGGTTGCTGTGCGTGCATTGATTGAATTCAATCGATGGAGGTTGCTGTGCGTGCAT TGATGNCCCATGCAATG



consensusID : consensus_6299#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 606
fasta sequence
                              [AGGCAGAATCGCCACGAGGTTATAGGCAAGAAGTTTACTTTCGACAATTCAAGAAACAACTTCCGCGGTAGCAATTGTTGGGCGTTGTGCGGTTCTAGATCAAAGCGAGTATATAACTAGGAGGCCAACCGAAATAGCTGAATCAGATGTATATATGTGTGAATCCATTTTCGATGAATTCAAAAAACAAATAAGAAAGATTGTCGCTCCTTCTGGATTACGTAAATTTACTCACAGTCAGATGGTCACAACAGATGAAATATATCATTTCCGACGTCCTATTAACCCTCCCAAGGTCACATGTGGTGAGATTGCTTCAGCCCAGGAGAATAAACCGATTTCGGCGAATGATTTGACGGCGTATGAGTGCTGTTGGGATAAATGTGACTTTCAGTTTGAGGATCCCGCGGAATTCTCTGAGCATTGCATTGCTGAAGGTGTAGGANTGTGTTTACAAGTCCTTCGTAGCGCCAACTGAACAAGAAATTCTATCTGTATCTGGAGAAAGTNGTGTACGAGGTTCGACGAAAGTATGCCTCCNTTTTCCATCTGTTACCACGACTTGTGAAGACATGTCAANAGGAAGTACATCTTAGACGAAACGGA]

[+] EMBL BX466569             [AGGCAGAATCGCCACGAGGTTATAGGCAAGAAGTTTACTTTCGACAATTCAAGAAACAACTTCCGCGGTAGCAATTGTTGGGCGTTGTGCGGTTCTAGATCAAAGCGAGTATATAACTAGGAGGCCAACCGAAATAGCTGAATCAGATGTATATATGTGTGAATCCATTTTCGATGAATTCAAAAAACAAATAAGAAAGATTGTCGCTCCTTCTGGATTACGTAAATTTACTCACAGTCAGATGGTCACAACAGATGAAATATATCATTTCCGACGTCCTATTAACCCTCCCAAGGTCACATGTGGTGAGATTGCTTCAGCCCAGGAGAATAAACCGATTTCGGCGAATGATTTGACGGCGTATGAGTGCTGTTGGGATAAATGTGACTTTCAGTTTGAGGATCCCGCGGAATTCTCTGAGCATTGCATTGCTGAAGGTGTAGGANTGTGTTTACAAGTCCTTCGTAGCGCCAACTGAACAAGAAATTCTATCTGTATCTGGAGAAAGTNGTGTACGAGGTTCGACGAAAGTATGCCTCCNTTTTCCATCTGTTACCACGACTTGTGAAGACATGTCAANAGGAAGTACATCTTAGACGAAACGGA]


>consensus_6299#3 AGGCAGAATCGCCACGAGGTTATAGGCAAGAAGTTTACTTTCGACAATTCAAGAAACAAC TTCCGCGGTAGCAATTGTTGGGCGTTGTGCGGTTCTAGATCAAAGCGAGTATATAACTAG GAGGCCAACCGAAATAGCTGAATCAGATGTATATATGTGTGAATCCATTTTCGATGAATT CAAAAAACAAATAAGAAAGATTGTCGCTCCTTCTGGATTACGTAAATTTACTCACAGTCA GATGGTCACAACAGATGAAATATATCATTTCCGACGTCCTATTAACCCTCCCAAGGTCAC ATGTGGTGAGATTGCTTCAGCCCAGGAGAATAAACCGATTTCGGCGAATGATTTGACGGC GTATGAGTGCTGTTGGGATAAATGTGACTTTCAGTTTGAGGATCCCGCGGAATTCTCTGA GCATTGCATTGCTGAAGGTGTAGGANTGTGTTTACAAGTCCTTCGTAGCGCCAACTGAAC AAGAAATTCTATCTGTATCTGGAGAAAGTNGTGTACGAGGTTCGACGAAAGTATGCCTCC NTTTTCCATCTGTTACCACGACTTGTGAAGACATGTCAANAGGAAGTACATCTTAGACGA AACGGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6299#2      ------------------------------------------------------------
consensus_6299#3      ------------------------------------------------------------
consensus_6299#0      ------------------------------------------------------------
consensus_6299#1      CCGCCCACGCGTCCGGCATTGCATTGCTGAAGGTGTAGGATGTGTTTACAAGTCCTTCGT 60
                                                                                  

consensus_6299#2      ------------------------------------------------------------
consensus_6299#3      ------------------------------------------------------------
consensus_6299#0      ------------------------------------------------------------
consensus_6299#1      AGCGCCAACTGAACAAGAATTTATCTGTATCTGGAGAAATTGTGTACGACTTCGACGAAA 120
                                                                                  

consensus_6299#2      ------------------------------------------------------------
consensus_6299#3      ------------------------------------------------------------
consensus_6299#0      ------------------------------------------------------------
consensus_6299#1      TATGCCTCCTTTTCCATCTGTTACACGACTTGTGAAACATGTCAAAGAAGTACATCTAAC 180
                                                                                  

consensus_6299#2      ------------------------------------------------------------
consensus_6299#3      ------------------------------------------------------------
consensus_6299#0      ------------------------------------------------------------
consensus_6299#1      GAAAGGAGTTAGCAAATTAATTCAACCGCAGGACCGTAGCAAAAACTACGTACATTCTAA 240
                                                                                  

consensus_6299#2      ------------------------------------------------------------
consensus_6299#3      ---------------------AGGCAGAATCGCCACGAGGTTATAGGCAAGAAGTTTACT 39
consensus_6299#0      -----------------------GCAGAATCCCCCGAGTTATGAGTGGAAGTA-CACGAA 36
consensus_6299#1      GCGCTTTACATCCGGCATACAGATTGGAAATAATGCAGGAATGAGTGGAAGTAACACGAA 300
                                                                                  

consensus_6299#2      ------------------------------------------------------------
consensus_6299#3      TTCGACAATTCAAGAAACAACTTCCGCGGTAGCAATTGTTGGGCGTTGTGCGGTTCTAGA 99
consensus_6299#0      CNC-AATAACAT-GGAATGATAACCTA---TGCAACCAATGGGTAACGTA-GGAAATCAT 90
consensus_6299#1      CACCAATAACATCGGAATGATAACCT----TGCAACCAATGGGTAACGTA-GGAAATCAT 355
                                                                                  

consensus_6299#2      --------------CGGAAGCAACGTTCGGTGACGTATCACGAATAGTCGGAAACGAGTG 46
consensus_6299#3      TCAAAGCGAGTATATAACTAGGAGGCCAACCGAAATAGCTGAATCAGATGTATATATGTG 159
consensus_6299#0      TCATCGCATAGTACTAGCGGAAACCTTATGGCATATGTCATACGCAAAACCCTG-GTGTA 149
consensus_6299#1      TCATCGCATAGTACTAGCGGAAACCTTATGGCAT-TGTCAT-CGCAAAACCCTG-GTGT- 411
                                            *         *  *  *      *           ** 

consensus_6299#2      ---GCGTAATTTGAGCGA--TCAAGAGAAGACTATATGGGAGCAGCGCGCCATTAAAATG 101
consensus_6299#3      TGAATCCATTTTCGATGAATTCAAAAAACAAATAAGAAAGATTGTCGCTCCTTCTGGATT 219
consensus_6299#0      -CAATCAAATATCAATA----CAATGCACGCACAGCAACCTCCATCGATGC-CCAATGCA 203
consensus_6299#1      -CAATCAAAT-TCAAT-----CAATGCACGCACAGCAACCTCCATCGATGC-CCAATGCA 463
                             * * *         ***   *     *           **   *         

consensus_6299#2      AATGAAGAAAGCGCAGCAAAACATGCAGCTGAAATGGGTGAATCAAATTGTCCCAG---- 157
consensus_6299#3      ACGTAAATTTACTCAC--AGTCAGATGGTCACAACAGATGAAATATATCATTTCCGACGT 277
consensus_6299#0      AATGGAATCAATGCAC--AACCAAATTGGCAGTACGATTG--CTACGCCACTAC------ 253
consensus_6299#1      AATGGAATCAATGCAC--AAC-AAATTGGCAGTACGATTG--CTACGCCA-TAC------ 511
                      *    *       **   *   *    *     *    **    *        *      

consensus_6299#2      CCCAGCGAACCTC--AAGACC---------GAGAGTCCAATCATTCAGGACATCA----- 201
consensus_6299#3      CCTATTAACCCTCCCAAGGTCACATGTGGTGAGATTGCTTCAGCCCAGGAGAATAAACCG 337
consensus_6299#0      TTTAGCCTATATTTCGAGTCAAC-GGCGGAACCATTATTTTGTAACAGTACCACCA--CG 310
consensus_6299#1      TTTAGC-TATATTTCGAGTCAACCGGCGGAACCATTATTT-GTAACAGTACCACCA--CG 567
                         *       *    **               * *         *** *          

consensus_6299#2      ----TAACCAATC--AT------GCGTATGAGTGCTGTTGGGATAAATGTGACTTTCAGT 249
consensus_6299#3      ATTTCGGCGAATG--ATTTGACGGCGTATGAGTGCTGTTGGGATAAATGTGACTTTCAGT 395
consensus_6299#0      ANCACAGCGAGTGCTACATTCTGACGCATATNTANANNNTACTATAGAGAGGCTTCAANA 370
consensus_6299#1      ACCACAGCGAGTGCTACATTCTGACGCATATATAAAATATA---TAGAGAGGCTTCAAC- 623
                             * * *   *        ** **   *            *  * * ***  *  

consensus_6299#2      TTGAGGATCCCGCGGAATTCTCTG-AGCATTGCATTGCTGAAGGTGTAGGAT-GTGTTTA 307
consensus_6299#3      TTGAGGATCCCGCGGAATTCTCTG-AGCATTGCATTGCTGAAGGTGTAGGANTGTGTTTA 454
consensus_6299#0      CNGAAATCAACATATATAACGCCGTGGCNAACAAACGTTCACAGCACCGAANAACGAAT- 429
consensus_6299#1      -AGAAATCAACATATATAACGCCGTGGCAAA-AAACGTTCACAGCA---AGAAAAGAAT- 677
                        **      *    *   * * *  **     *  * * *  *           *  * 

consensus_6299#2      CAAGTCCTTCGTAGCGCCAACTGAACAAGAA--TTTATCTG-TATCTGGAGAAA-TTGTG 363
consensus_6299#3      CAAGTCCTTCGTAGCGCCAACTGAACAAGAAATTCTATCTG-TATCTGGAGAAAGTNGTG 513
consensus_6299#0      CACATTCCTAATACTGACTGTCAACAGACTATCCATCACAGCTGGCTAGGTAAA-CCGTG 488
consensus_6299#1      CA-ATTCCTAATACTGA-TGTCAACAGACT-TCCATCACAG-TGGCTAGGTAAA-C-GTG 731
                      **  * * *  **  *       *   *       *  * * *  ** *  ***   ***

consensus_6299#2      TACGAC-TT-CGACGAAA-TATGCCTCCT-TTT-CCATCTG---TTAC-ACGAC-TTGTG 413
consensus_6299#3      TACGAGGTT-CGACGAAAGTATGCCTCCN-TTTTCCATCTG---TTACCACGAC-TTGTG 567
consensus_6299#0      GTCAAGATCGCCCCGAGGTTGTAACTTGACTGCTTTATAGGGATTNTGCGCAACACTTTC 548
consensus_6299#1      GTCAAGATCGCCCCGAGGTTGTAA-TTGA-TGCTTTATGGGA--TTTGCGAAA---TNTC 784
                        * *  *  *  ***   * *   *    *     **  *   *       *   * * 

consensus_6299#2      AA-ACATGTCAAA--GAAGTACA--TCT--AACGAAAGGAGTTAGCAAATTAATTCAACC 466
consensus_6299#3      AAGACATGTCAANAGGAAGTACA--TCTTAGACGAAACGGA------------------- 606
consensus_6299#0      ACTGACTGAAAGCATGTNATACAAANTCNGATCGTAACACATAAACATTATCCCANTACT 608
consensus_6299#1      A-TGA-TGAAAG-ATGTTATACA--ATTTGATCGTT---TTTAAACATTATCC--ATTTT 834
                      *     **  *    *   ****         **                          

consensus_6299#2      GCAGGACCGTAGCAAAAACTACGTACATTCTAAGCGCTTTACATCCGGCATACAGATTGG 526
consensus_6299#3      ------------------------------------------------------------
consensus_6299#0      AACTTGGTAACTGTTCAACCTGCTAANACATAANTNNATTCTCCCAACCCNCTTCNACTN 668
consensus_6299#1      ACTGTAGTG-----TCAAC-TGCTAAAATA-AGTTAT----------------------- 864
                                                                                  

consensus_6299#2      AAATAATGCAGGAATGAGTGGAAGTAACACGAACACCAATAACATCGGAATGATAACCTT 586
consensus_6299#3      ------------------------------------------------------------
consensus_6299#0      AATATCTCCNACAATAAACAACAACACACTTGACACCTAACTTCTCCGGNNTACNACAAC 728
consensus_6299#1      ------------------------------------------------------------
                                                                                  

consensus_6299#2      GCAACCAATGGGTAACGTANGAAATCATTCATCGCATAGTACTAGCGGAAACCTTATGGC 646
consensus_6299#3      ------------------------------------------------------------
consensus_6299#0      CNNAACCCTNCNAACCCAATTACTTTCATCCCCCTAACACTTACTANTACANTAACTATC 788
consensus_6299#1      ------------------------------------------------------------
                                                                                  

consensus_6299#2      ATTGTCATCGCAAAACCCTGGTGTCAATCAAATTCAATCNATGCACGCACAGCAACCTCC 706
consensus_6299#3      ------------------------------------------------------------
consensus_6299#0      CGCTCACCCNCTCCACCCACATCTCAAACGCAGCTAANCCANACTCCTCCCCTTCCCCTC 848
consensus_6299#1      ------------------------------------------------------------
                                                                                  

consensus_6299#2      ATCGATTGAATTTGATTGAGGTTGCTGTGCGTGCATTGATTGAATTCAATCGATGGAGGT 766
consensus_6299#3      ------------------------------------------------------------
consensus_6299#0      GGCTCATTGTCTCACCCCCCTCTCCCTTCNTCTCNACCTCNCCGCCACTCCGACACCAAC 908
consensus_6299#1      ------------------------------------------------------------
                                                                                  

consensus_6299#2      TGCTGTGCGTGCATTGATGNCCCATGCAATG 797
consensus_6299#3      -------------------------------
consensus_6299#0      TAACTCTTNTCNCCCTCCGCCAC-------- 931
consensus_6299#1      -------------------------------
                                                     




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)