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Anopheles gambiae
cluster # 6378 cluster # 6378       Sequences # 5       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6378#0 length = 980 sequences # 2  
consensus_6378#1 length = 956 sequences # 1  
consensus_6378#2 length = 700 sequences # 1  
consensus_6378#3 length = 678 sequences # 1  

consensusID : consensus_6378#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 980
fasta sequence
                              [CCGGAAAGATTTTTACCGAATTTTACCTCGAATGGTGTGTGTAGAAAGTGCTGGCGCAATATGACTTCCATCATCAAGATGCACGCCATATCTGGCGCGATGGATGAGTCGCCCCCGTGCTATATCCTGCAGGTGGACGATGTGCGAATTTTGCTCGACTGCGGCTGGGATGAAAAGTTCGACCAGGGATTTATAAAGGAAATCAAAAAATACGTGCATACGATCGACGCCGTGCTGCTGTCCTACCCCGATGGCAGTCATCTCGGGGCCTTACCGTACTTGGTCGGTAAGCTGGGCCTGAACTGTCCAATCTACGCAACGATTCCAGTGTACAAGATGGGCCAAATGTTCATGTACGACATGTTTATGTCGCACTACAACATGCACGATTTCGACCTCTTCTCGCTCGACGACGTGGACGCGGCGTTCGATAAAATTGTCCAGCTAAAGTACAACCAAAGCGTGGCGATGAAGGGCAAAGGATACGGTATCACCATCACACCCCCTTGCCGGCCGGGCACCCTGATCGGTGGCGCCATTTGGAAGAATTGTGAAGGTGGGCGAGGAGGACATCGTGTATGCGACCGACTTTAATCACAAAAAGGAGCGCCATCTGAACGGTTGCGAGCTGGAGAAGCTGCAGCGGCCCTCGCTGCTGATTACGGACGCGTACAACGCCCGGTACCAGCAGGCACGGCGACGTGCGCGGGACGAAAAGTTCATGACCAACATTCTGCAAACGCTGCGCAACAATGGCAATGTGCTGGTAACGGTCGACACGGCCGGGCGCGTGCTGGAGCTGGCGCACATGCTCGACCAGCTGTGGAAAAACAAAGAGTCCGGACTGATGGCGTACTCCCTGGCGCTGCTGAACAACCAGAGCTACAACGTGGTCGAGTTCGCGAAAAGCCAGATCGAGTGGATGAGCGACAAGCTGATGAAAAGCTTCGAGGGCGCCCGTAACAATCCGTTCACCTTCA]

[+] EMBL BM617046             [CCGGAAAGATTTTTACCGAATTTTACCTCGAATGGTGTGTGTAGAAAGTGCTGGCGCAATATGACTTCCATCATCAAGATGCACGCCATATCTGGCGCGATGGATGAGTCGCCCCCGTGCTATATCCTGCAGGTGGACGATGTGCGAATTTTGCTCGACTGCGGCTGGGATGAAAAGTTCGACCAGGGATTTATAAAGGAAATCAAAAAATACGTGCATACGATCGACGCCGTGCTGCTGTCCTACCCCGATGGCAGTCATCTCGGGGCCTTACCGTACTTGGTCGGTAAGCTGGGCCTGAACTGTCCAATCTACGCAACGATTCCAGTGTACAAGATGGGCCAAATGTTCATGTACGACATGTTTATGTCGCACTACAACATGCACGATTTCGACCTCTTCTCGCTCGACGACGTGGACGCGGCGTTCGATAAAATTGTCCAGCTAAAGTACAACCAAAGCGTGGCGATGAAGGGCAAAGGATACGGTATCACCATCACACCCCCTTGCCGGCCGGGCACCCTGATCGGTGGCGCCATTTGGAAGAATTGTGAAGGTGGGCGAGGAGGACATCGTGTATGCGACCGACTTTAAT                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM614532             [                                                                                                                                                                                                                                                                                                                                                 ccGGGCAAATGTTCATGTACGACATGTTTATGTCGCACTACAACATGCACGATTTCGACCTCTTCTCGCTCGACGACGTGGACGCAGCGTTCGATAAAATTGTCCAGCTAAAGTACAACCAAAGCGTGGCGATGAAGGGCAAAGGATACGGTATCACCATCACACCCC  TGCCGGCCGGCCA CCTGATCGGTGGCACCATTTGGAAG ATTGTGAAGGTGGGCGAGGAGGATATCGTGTATGCGACCGATTTTAATCACAAAAAGGAGCGCCATCTGAACGGTTGCGAGCTGGAGAAGCTGCAGCGGCCCTCGCTGCTGATTACGGACGCGTACAACGCCCGGTACCAGCAGGCACGGCGACGTGCGCGGGACGAAAAGTTCATGACCAACATTCTGCAAACGCTGCGCAACAATGGCAATGTGCTGGTAACGGTCGACACGGCCGGGCGCGTGCTGGAGCTGGCGCACATGCTCGACCAGCTGTGGAAAAACAAAGAGTCCGGACTGATGGCGTACTCCCTGGCGCTGCTGAACAACCAGAGCTACAACGTGGTCGAGTTCGCGAAAAGCCAGATCGAGTGGATGAGCGACAAGCTGATGAAAAGCTTCGAGGGCGCCCGTAACAATCCGTTCACCTTCA]


>consensus_6378#0 CCGGAAAGATTTTTACCGAATTTTACCTCGAATGGTGTGTGTAGAAAGTGCTGGCGCAAT ATGACTTCCATCATCAAGATGCACGCCATATCTGGCGCGATGGATGAGTCGCCCCCGTGC TATATCCTGCAGGTGGACGATGTGCGAATTTTGCTCGACTGCGGCTGGGATGAAAAGTTC GACCAGGGATTTATAAAGGAAATCAAAAAATACGTGCATACGATCGACGCCGTGCTGCTG TCCTACCCCGATGGCAGTCATCTCGGGGCCTTACCGTACTTGGTCGGTAAGCTGGGCCTG AACTGTCCAATCTACGCAACGATTCCAGTGTACAAGATGGGCCAAATGTTCATGTACGAC ATGTTTATGTCGCACTACAACATGCACGATTTCGACCTCTTCTCGCTCGACGACGTGGAC GCGGCGTTCGATAAAATTGTCCAGCTAAAGTACAACCAAAGCGTGGCGATGAAGGGCAAA GGATACGGTATCACCATCACACCCCCTTGCCGGCCGGGCACCCTGATCGGTGGCGCCATT TGGAAGAATTGTGAAGGTGGGCGAGGAGGACATCGTGTATGCGACCGACTTTAATCACAA AAAGGAGCGCCATCTGAACGGTTGCGAGCTGGAGAAGCTGCAGCGGCCCTCGCTGCTGAT TACGGACGCGTACAACGCCCGGTACCAGCAGGCACGGCGACGTGCGCGGGACGAAAAGTT CATGACCAACATTCTGCAAACGCTGCGCAACAATGGCAATGTGCTGGTAACGGTCGACAC GGCCGGGCGCGTGCTGGAGCTGGCGCACATGCTCGACCAGCTGTGGAAAAACAAAGAGTC CGGACTGATGGCGTACTCCCTGGCGCTGCTGAACAACCAGAGCTACAACGTGGTCGAGTT CGCGAAAAGCCAGATCGAGTGGATGAGCGACAAGCTGATGAAAAGCTTCGAGGGCGCCCG TAACAATCCGTTCACCTTCA



consensusID : consensus_6378#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 956
fasta sequence
                              [AGAATCCCCGCGGTTTANGCCATGTTTCCCTTCCACNCAGGAAAATGATTAAGTACGATGAGTACGGGGAAATTATTCAACCGGACGACTATCGCATGGTCGACCTGGTGCCCGGAAACGAACGGGGGCGATGATAATAAGGAAAACGGAGTGTATCAAGACGGAGTGACATCAAGAAGGAACAATGTGCAGTGACGAGGTGACNGTGTGCTGGACAAACCGACCAAGTGCGTGCAGTCTGCTGCAAACCGATCGAAGTGAACTGCGCAGGTACAGTTTATCGACTTCGAGGCCGTTACTGGGATNGGTGGATACGTTCGCTTGCACAAATTNCTACTACCCCCAGACTTGACGNTTACCCCGTGAGAGGTTGGGTNGGTAGNGTTAGCAGCAGAGTATTACAGCCCGTNCAAACACTGTACCCCCAAATACCGCCCGAGACCACTTGGCAAGCACAAATTAATTAAAGGACGCCGCGGTTGTAATTTNCCAAACAACACCAAATACAGATAGGGTNGGAGGCATTAATCGGAGAGGCCCCAACCCAAGTGTGGAAAAACTGGNACGNACCGATTCCTTAATTCCAANGGTTAAACGGGGTCTTGAACCCGGCAAGACGGCTACGNAGGTACCGCAGGATTCGGANGTTACCACCAAGGGAAAANGGGCGGCAACACAGTGGATTTGGCCCCAGGAAGAGGGTNTGGGGACCCTTAGGGCGGGTTATGGGGACAATTAGNCCAANCAANGGAAATTACACGNTCGGGACATTTACNGGGCACANCACAAATAGCATGGAAAATATAAACGAACCAACACACCCGGTTGAGNAGNCGGACGGNAGCAAAAAGATGGGACACTGGCNCACAACAACAGTGCTNATGNGCGGGNACACAACAATTAGGGCGGGGGTTGNGGGTGACAGACACCCTTTGGCTNAATACCGAGGGAGCCAC]

[+] EMBL AL694691             [AGAATCCCCGCGGTTTANGCCATGTTTCCCTTCCACNCAGGAAAATGATTAAGTACGATGAGTACGGGGAAATTATTCAACCGGACGACTATCGCATGGTCGACCTGGTGCCCGGAAACGAACGGGGGCGATGATAATAAGGAAAACGGAGTGTATCAAGACGGAGTGACATCAAGAAGGAACAATGTGCAGTGACGAGGTGACNGTGTGCTGGACAAACCGACCAAGTGCGTGCAGTCTGCTGCAAACCGATCGAAGTGAACTGCGCAGGTACAGTTTATCGACTTCGAGGCCGTTACTGGGATNGGTGGATACGTTCGCTTGCACAAATTNCTACTACCCCCAGACTTGACGNTTACCCCGTGAGAGGTTGGGTNGGTAGNGTTAGCAGCAGAGTATTACAGCCCGTNCAAACACTGTACCCCCAAATACCGCCCGAGACCACTTGGCAAGCACAAATTAATTAAAGGACGCCGCGGTTGTAATTTNCCAAACAACACCAAATACAGATAGGGTNGGAGGCATTAATCGGAGAGGCCCCAACCCAAGTGTGGAAAAACTGGNACGNACCGATTCCTTAATTCCAANGGTTAAACGGGGTCTTGAACCCGGCAAGACGGCTACGNAGGTACCGCAGGATTCGGANGTTACCACCAAGGGAAAANGGGCGGCAACACAGTGGATTTGGCCCCAGGAAGAGGGTNTGGGGACCCTTAGGGCGGGTTATGGGGACAATTAGNCCAANCAANGGAAATTACACGNTCGGGACATTTACNGGGCACANCACAAATAGCATGGAAAATATAAACGAACCAACACACCCGGTTGAGNAGNCGGACGGNAGCAAAAAGATGGGACACTGGCNCACAACAACAGTGCTNATGNGCGGGNACACAACAATTAGGGCGGGGGTTGNGGGTGACAGACACCCTTTGGCTNAATACCGAGGGAGCCAC]


>consensus_6378#1 AGAATCCCCGCGGTTTANGCCATGTTTCCCTTCCACNCAGGAAAATGATTAAGTACGATG AGTACGGGGAAATTATTCAACCGGACGACTATCGCATGGTCGACCTGGTGCCCGGAAACG AACGGGGGCGATGATAATAAGGAAAACGGAGTGTATCAAGACGGAGTGACATCAAGAAGG AACAATGTGCAGTGACGAGGTGACNGTGTGCTGGACAAACCGACCAAGTGCGTGCAGTCT GCTGCAAACCGATCGAAGTGAACTGCGCAGGTACAGTTTATCGACTTCGAGGCCGTTACT GGGATNGGTGGATACGTTCGCTTGCACAAATTNCTACTACCCCCAGACTTGACGNTTACC CCGTGAGAGGTTGGGTNGGTAGNGTTAGCAGCAGAGTATTACAGCCCGTNCAAACACTGT ACCCCCAAATACCGCCCGAGACCACTTGGCAAGCACAAATTAATTAAAGGACGCCGCGGT TGTAATTTNCCAAACAACACCAAATACAGATAGGGTNGGAGGCATTAATCGGAGAGGCCC CAACCCAAGTGTGGAAAAACTGGNACGNACCGATTCCTTAATTCCAANGGTTAAACGGGG TCTTGAACCCGGCAAGACGGCTACGNAGGTACCGCAGGATTCGGANGTTACCACCAAGGG AAAANGGGCGGCAACACAGTGGATTTGGCCCCAGGAAGAGGGTNTGGGGACCCTTAGGGC GGGTTATGGGGACAATTAGNCCAANCAANGGAAATTACACGNTCGGGACATTTACNGGGC ACANCACAAATAGCATGGAAAATATAAACGAACCAACACACCCGGTTGAGNAGNCGGACG GNAGCAAAAAGATGGGACACTGGCNCACAACAACAGTGCTNATGNGCGGGNACACAACAA TTAGGGCGGGGGTTGNGGGTGACAGACACCCTTTGGCTNAATACCGAGGGAGCCAC



consensusID : consensus_6378#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 700
fasta sequence
                              [AAATTATTCAACCGGACGACTATCGCATGGTCGACCTGGGCCCGGAAACGAACGGGGGCGATGATAATAAGGAGAACGGAGGCATCAAGACGGAGGACATCAAGAAGGAAAAGGAGGACGAGGTGACGGTGCTCGACAAACCGACCAAGTGCGTGCAGTCGCGCAAACCGATCGAAGTGAACGCGCAGGTACAGTTTATCGACTTCGAGGGCCGTTCGGATGGGGAATCGTTGCTGAAAATTCTCTCCCAGCTGCGTCCCCGGCGGGTGGTGGTGGTGCGCGGTTCGCCCGCCAACACGTCCCACATCGCCGAGCACTGCCAGCAAAATATAGGCGCGCGTGTGTTCACACCCAATCGTGGTGAGATTATCGACGCAACCACGGAAACGCACATCTATCAGGTACGGTTGACGGAAGCGCTCGTGTCGCAGCTCGAGTTCCAGAAGGGCAAGGATGCCGAGGTGGCCTGGGTGGATGCACAGATCGTGATTCGCAACAAACGAATAGACACCGTGGCGGAGAAGGACGCTAACGGTGCGGCAAATGGCGGTGGTACCCTGCTATCGGCCAATCCTGTCGTTCCCGGAGCTGGCGGAAACTTGGGCGGTGGTGGTGCTGGTGGTGGTGGCNGTGCCNGCGATACGCAGATGGAGGTGGGACGATGTNGATACNATCGACCATAAGATGGACAACCGATTTT]

[+] EMBL BX624101             [AAATTATTCAACCGGACGACTATCGCATGGTCGACCTGGGCCCGGAAACGAACGGGGGCGATGATAATAAGGAGAACGGAGGCATCAAGACGGAGGACATCAAGAAGGAAAAGGAGGACGAGGTGACGGTGCTCGACAAACCGACCAAGTGCGTGCAGTCGCGCAAACCGATCGAAGTGAACGCGCAGGTACAGTTTATCGACTTCGAGGGCCGTTCGGATGGGGAATCGTTGCTGAAAATTCTCTCCCAGCTGCGTCCCCGGCGGGTGGTGGTGGTGCGCGGTTCGCCCGCCAACACGTCCCACATCGCCGAGCACTGCCAGCAAAATATAGGCGCGCGTGTGTTCACACCCAATCGTGGTGAGATTATCGACGCAACCACGGAAACGCACATCTATCAGGTACGGTTGACGGAAGCGCTCGTGTCGCAGCTCGAGTTCCAGAAGGGCAAGGATGCCGAGGTGGCCTGGGTGGATGCACAGATCGTGATTCGCAACAAACGAATAGACACCGTGGCGGAGAAGGACGCTAACGGTGCGGCAAATGGCGGTGGTACCCTGCTATCGGCCAATCCTGTCGTTCCCGGAGCTGGCGGAAACTTGGGCGGTGGTGGTGCTGGTGGTGGTGGCNGTGCCNGCGATACGCAGATGGAGGTGGGACGATGTNGATACNATCGACCATAAGATGGACAACCGATTTT]


>consensus_6378#2 AAATTATTCAACCGGACGACTATCGCATGGTCGACCTGGGCCCGGAAACGAACGGGGGCG ATGATAATAAGGAGAACGGAGGCATCAAGACGGAGGACATCAAGAAGGAAAAGGAGGACG AGGTGACGGTGCTCGACAAACCGACCAAGTGCGTGCAGTCGCGCAAACCGATCGAAGTGA ACGCGCAGGTACAGTTTATCGACTTCGAGGGCCGTTCGGATGGGGAATCGTTGCTGAAAA TTCTCTCCCAGCTGCGTCCCCGGCGGGTGGTGGTGGTGCGCGGTTCGCCCGCCAACACGT CCCACATCGCCGAGCACTGCCAGCAAAATATAGGCGCGCGTGTGTTCACACCCAATCGTG GTGAGATTATCGACGCAACCACGGAAACGCACATCTATCAGGTACGGTTGACGGAAGCGC TCGTGTCGCAGCTCGAGTTCCAGAAGGGCAAGGATGCCGAGGTGGCCTGGGTGGATGCAC AGATCGTGATTCGCAACAAACGAATAGACACCGTGGCGGAGAAGGACGCTAACGGTGCGG CAAATGGCGGTGGTACCCTGCTATCGGCCAATCCTGTCGTTCCCGGAGCTGGCGGAAACT TGGGCGGTGGTGGTGCTGGTGGTGGTGGCNGTGCCNGCGATACGCAGATGGAGGTGGGAC GATGTNGATACNATCGACCATAAGATGGACAACCGATTTT



consensusID : consensus_6378#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 678
fasta sequence
                              [AATCCCCCGAGGTTAAAATTTCTCTGCTCGTACTGCTCGCCGGCATCATCGAAAGATTTTCACCGAATTTTACCTCGAATGGTGTGTGTAGAAAGTGCTCGCGCAAACCGATCGAAGTGAACGCGCAGGTACAGTTTATCGACTTCGAGGGCCGTTCGGATGGGGAGTCGTTGCTGAAAATTCTCTCTCAGCTGCGTCCCCGGCGGGTGGTGGTGGTGCGCGGTTCGCCCGCCAACACGTCCCACATCGCCGAGCACTGCCAGCAAAATATAGGCGCGCGTGTGTTCACACCCAATCGTGGTGAGATTATCGACGCAACCACGGAAACGCACATCTATCAGGTACGGTTGACGGAAGCGCTCGTGTCGCAGCTCGAGTTCCAGAAGGGCAAGGATGCCGAGGTGGCCTGGGTGGATGCACAGATCGTGATTCGCAACAAGCGAATAGACACCGTGGCGGCAGAAGGACGCAAACGGTGCGNGCCAAATGGCGGTGGTACCCTGCTATCGGCCAATCCTGCTCGNTTCCCGGCAGCCTGGCCGGANAACTTGCGGCGGNGGTGGTGCTGGTGCTGGTGNGCGGTGCCGGCGNTACNCCACCATGGCACGGTGCGCACGACTGTGGCNCTNCCCACTCGCACCATACNCATGGNCCNACACAGATTTTCACACGCTNGCA]

[+] EMBL AL694815             [AATCCCCCGAGGTTAAAATTTCTCTGCTCGTACTGCTCGCCGGCATCATCGAAAGATTTTCACCGAATTTTACCTCGAATGGTGTGTGTAGAAAGTGCTCGCGCAAACCGATCGAAGTGAACGCGCAGGTACAGTTTATCGACTTCGAGGGCCGTTCGGATGGGGAGTCGTTGCTGAAAATTCTCTCTCAGCTGCGTCCCCGGCGGGTGGTGGTGGTGCGCGGTTCGCCCGCCAACACGTCCCACATCGCCGAGCACTGCCAGCAAAATATAGGCGCGCGTGTGTTCACACCCAATCGTGGTGAGATTATCGACGCAACCACGGAAACGCACATCTATCAGGTACGGTTGACGGAAGCGCTCGTGTCGCAGCTCGAGTTCCAGAAGGGCAAGGATGCCGAGGTGGCCTGGGTGGATGCACAGATCGTGATTCGCAACAAGCGAATAGACACCGTGGCGGCAGAAGGACGCAAACGGTGCGNGCCAAATGGCGGTGGTACCCTGCTATCGGCCAATCCTGCTCGNTTCCCGGCAGCCTGGCCGGANAACTTGCGGCGGNGGTGGTGCTGGTGCTGGTGNGCGGTGCCGGCGNTACNCCACCATGGCACGGTGCGCACGACTGTGGCNCTNCCCACTCGCACCATACNCATGGNCCNACACAGATTTTCACACGCTNGCA]


>consensus_6378#3 AATCCCCCGAGGTTAAAATTTCTCTGCTCGTACTGCTCGCCGGCATCATCGAAAGATTTT CACCGAATTTTACCTCGAATGGTGTGTGTAGAAAGTGCTCGCGCAAACCGATCGAAGTGA ACGCGCAGGTACAGTTTATCGACTTCGAGGGCCGTTCGGATGGGGAGTCGTTGCTGAAAA TTCTCTCTCAGCTGCGTCCCCGGCGGGTGGTGGTGGTGCGCGGTTCGCCCGCCAACACGT CCCACATCGCCGAGCACTGCCAGCAAAATATAGGCGCGCGTGTGTTCACACCCAATCGTG GTGAGATTATCGACGCAACCACGGAAACGCACATCTATCAGGTACGGTTGACGGAAGCGC TCGTGTCGCAGCTCGAGTTCCAGAAGGGCAAGGATGCCGAGGTGGCCTGGGTGGATGCAC AGATCGTGATTCGCAACAAGCGAATAGACACCGTGGCGGCAGAAGGACGCAAACGGTGCG NGCCAAATGGCGGTGGTACCCTGCTATCGGCCAATCCTGCTCGNTTCCCGGCAGCCTGGC CGGANAACTTGCGGCGGNGGTGGTGCTGGTGCTGGTGNGCGGTGCCGGCGNTACNCCACC ATGGCACGGTGCGCACGACTGTGGCNCTNCCCACTCGCACCATACNCATGGNCCNACACA GATTTTCACACGCTNGCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6378#2      ------------------------------------------------------------
consensus_6378#3      ------------------------------------------------------------
consensus_6378#1      ------AGAATCCCCGCGGTTTANGCCATGTTTCCCTTCCACNCAGGAAAATGATTAAGT 54
consensus_6378#0      CCGGAAAGATTTTTACCGAATTTTACCTCGAATGGTGTGTGTAGAAAGTGCTGGCGCAAT 60
                                                                                  

consensus_6378#2      ---------------AAATTATTCA----ACCGGACGACTATCGCATGGTCGACCTGG-G 40
consensus_6378#3      ------------------------------------------------------------
consensus_6378#1      ACGATGAGTACGGGGAAATTATTCA----ACCGGACGACTATCGCATGGTCGACCTGGTG 110
consensus_6378#0      ATGACTTCCATCATCAAGATGCACGCCATATCTGGCG-CGATGGATGAGTCGCCCCCGTG 119
                                                                                  

consensus_6378#2      CCCGGAAACGAACGGGGGCGATGATAATAAGGAGAACGGAG-GCATCAAGACGGAG-GAC 98
consensus_6378#3      --------------AATCCCCCGAGGTTAAAATTTCTCTGC-TCGTACTGCTCGCC-GGC 44
consensus_6378#1      CCCGGAAACGAACGGGGGCGATGATAATAAGGAAAACGGAGTGTATCAAGACGGAGTGAC 170
consensus_6378#0      CTATATCCTGCAGGTGGACGATG-TGCGAATTTTGCTCGACTGCGGCTGGGATGAAAAGT 178
                                        *   *     **                   *   *      

consensus_6378#2      ATCAAGAAGGAAAAGGAGG-----ACGAGGTGACGGTGCTC--GAC--AAACCGACCAAG 149
consensus_6378#3      ATCATCGAAAGATTTTCAC-----CGAATTTTACCTCGAAT--GGT--GTGTGTAGAAAG 95
consensus_6378#1      ATCAAGAAGGAACAATGTGCAGTGACGAGGTGACNGTGTGCTGGAC--AAACCGACCAAG 228
consensus_6378#0      TCGACCAGGGATTTATAAAGGAAATCAAAAAATACGTGCATACGATCGACGCCGTGCTGC 238
                         *                       *         *     *                

consensus_6378#2      TGCGTGCAGTCG--CGCAAACCGATCGAAGTGA-AC-GCGCAGGTACAGTTTATCGACTT 205
consensus_6378#3      TGC------TCG--CGCAAACCGATCGAAGTGA-AC-GCGCAGGTACAGTTTATCGACTT 145
consensus_6378#1      TGCGTGCAGTCTGCTGCAAACCGATCGAAGTGA-ACTGCGCAGGTACAGTTTATCGACTT 287
consensus_6378#0      TGTCCTACCCCGATGGCAGTCATCTCGGGGCCTTACCGTACTTGGTCGGTAAGCTGGGCC 298
                      **        *    ***  *   ***  *    ** *  *  *  * **     *    

consensus_6378#2      CGAGG--GCCGTTCGGATGGGGAA------TCG-TTGCTGAAAATTCT-----CTCCCAG 251
consensus_6378#3      CGAGG--GCCGTTCGGATGGGGAG------TCG-TTGCTGAAAATTCT-----CTCTCAG 191
consensus_6378#1      CGAGGCCGTTACTGGGATNGGTGGATACGTTCGCTTGCACAAATTNCTACTA-CCCCCAG 346
consensus_6378#0      TGAACTGTCCAATCTACGCAACGA-----TTCCAGTGTACAAGATGGGCCAAATGTTCAT 353
                       **         *                 **   **   **  *            ** 

consensus_6378#2      CT-----GCGTCCCCGGCGGGTGGTGGTGGTGCGCGGTTCGCCCGCCAACACGTCCCACA 306
consensus_6378#3      CT-----GCGTCCCCGGCGGGTGGTGGTGGTGCGCGGTTCGCCCGCCAACACGTCCCACA 246
consensus_6378#1      ACTTGACGNTTACCCCGTGAGAGGTTG-GGTNGGTAGNGTTAGCAGCAGAGTATTACAGC 405
consensus_6378#0      GTACGACATGTTTATGTCGCACTACAA-CATGCACGATTTCGACCTCTTCTCGCTCGACG 412
                                *       *           *            *  *          *  

consensus_6378#2      TCG-CCGAGCACTGC-CAGCAAAATAT------AGGCGCGCGTGTGTTCACACCCAATCG 358
consensus_6378#3      TCG-CCGAGCACTGC-CAGCAAAATAT------AGGCGCGCGTGTGTTCACACCCAATCG 298
consensus_6378#1      CCGTNCAAACACTGTACCCCCAAATACCGCCCGAGACCACTTGGCAAGCACAAATTAATT 465
consensus_6378#0      ACGTGGACGCGGCGTTCGATAAAATTGTC----CAGCTAAAGTACAACCAAAGCGTGGCG 468
                       **      *   *  *    ****           *           ** *        

consensus_6378#2      TGGTGAGATTATCGACGCAACCACGGAAACGCACATCTAT------CAGGTAC---GGTT 409
consensus_6378#3      TGGTGAGATTATCGACGCAACCACGGAAACGCACATCTAT------CAGGTAC---GGTT 349
consensus_6378#1      AAAGGACGCCGCGGTTGTAATTTNCCAAACA-ACACCAAATA----CAGATAG---GGTN 517
consensus_6378#0      ATGAAGGGCAAAGGATACGGTATCACCATCACACCCCCTTGCCGGCCGGGCACCCTGATC 528
                                   *             * *  **  *         * *  *    * * 

consensus_6378#2      GACGGAAGCGCTCGT----GTCGCAGCTCGAGTTCCAGAAGGGCAAGGATGCCGAGGTGG 465
consensus_6378#3      GACGGAAGCGCTCGT----GTCGCAGCTCGAGTTCCAGAAGGGCAAGGATGCCGAGGTGG 405
consensus_6378#1      GGAGGCATTAATCGGAGAGGCCCCAACCCAAGTGT-GGAAAAACTGGNACGNACCGATTC 576
consensus_6378#0      GGTGGCGCCATTTGGAAGAATTGTGAAGGTGGGCGAGGAGGACATCGTGTATGCGACCGA 588
                      *  **      * *                 *     **       *             

consensus_6378#2      CCTGGGTG-GATGCACAGATCGTGATTCGCA-----ACAAAC--GAATAGACACCGTGG- 516
consensus_6378#3      CCTGGGTG-GATGCACAGATCGTGATTCGCA-----ACAAGC--GAATAGACACCGTGG- 456
consensus_6378#1      CTTAATTCCAANGGTTAAACGGGGTCTTGAA-----CCCGGC--AAGACGGCTACGNAGG 629
consensus_6378#0      CTTTAATC-ACAAAAAGGAGCGCCATCTGAACGGTTGCGAGCTGGAGAAGCTGCAGCGGC 647
                      * *   *           *  *      * *      *   *   *   *     *  * 

consensus_6378#2      -----CGG-AGAA---GGACGCTAACGGTGC--GG--CAAATGGCGGTGGTACCCTGCTA 563
consensus_6378#3      -----CGGCAGAA---GGACGCAAACGGTGC--GNGCCAAATGGCGGTGGTACCCTGCTA 506
consensus_6378#1      T---ACCGCAGGATTCGGANGTTACCACCAA--GGGAAAANGGGCGGCAACACAGTGGAT 684
consensus_6378#0      CCTCGCTGCTGATTACGGACGCGTACAACGCCCGGTACCAGCAGGCACGGCGACGTGCGC 707
                           * *  *     *** *    *       *     *   *           **   

consensus_6378#2      TCGGCCAATCCTGTC--GTTCCCGG--AGCTGGC--GGAAACTTG-GGCGGTGGTGGTGC 616
consensus_6378#3      TCGGCCAATCCTGCTCGNTTCCCGGCAGCCTGGCCGGANAACTTGCGGCGGNGGTGGTGC 566
consensus_6378#1      TTGGCCCCAGGAAGAGGGTNTGGGGACCCTTAG---GGCGGGTTATGGGGACAATTAGNC 741
consensus_6378#0      GGGACGAAAAGTTCATGACCAACATTCTGCAAAC--GCTGCGCAACAATGGCAAT-GTGC 764
                        * *                               *            *    *    *

consensus_6378#2      TGGTGGTGGTGG-CNGTGCCNGCGATACGCAG--ATGGA--GGTGGG-ACGATGTNGA-- 668
consensus_6378#3      TGGTGCTGGTGNGCGGTGCCGGCGNTACNCCACCATGGCACGGTGCGCACGACTGTGG-- 624
consensus_6378#1      CAANCAANGGAAATTACACGNTCGGGACATTTACNGGGCACANCACAAATAGCATGGAAA 801
consensus_6378#0      TGGTAACGGTCGACACGGCCGGGCGCGTGCTGGAGCTGGCGCACATGCTCGACCAGCTGT 824
                              *         *                  *                      

consensus_6378#2      -TACNATCGAC------CATAAG-ATGGACAACC----GATTTT---------------- 700
consensus_6378#3      -CNCTNCCCACTCGCACCATACNCATGGNCCNACACA-GATTTTCACACGCTNGCA---- 678
consensus_6378#1      ATATAAACGAACCAACACACCCGGTTGAGNAGNCGGACGGNAGCAAAAAGATGGGACACT 861
consensus_6378#0      GGAAAAACAAAG-AGTCCGGACTGATGGCGTACTCCCTGGCGCTGCTGAACAACCAGAGC 883
                             * *       *       **           *                     

consensus_6378#2      ------------------------------------------------------------
consensus_6378#3      ------------------------------------------------------------
consensus_6378#1      GGCNCACAACAACAGTGCTNATGNGCGGGNACACAACAATTAGGGCGGGGGTTGNGGGTG 921
consensus_6378#0      TACAACGTGGTCGAGTTCGCGAAAAGCCAGATCGAGTGGATGAGCGACAAGCTGATGAAA 943
                                                                                  

consensus_6378#2      -------------------------------------
consensus_6378#3      -------------------------------------
consensus_6378#1      ACAGACACCCTTTGGCTNAATACCGAGGGAGCCAC-- 956
consensus_6378#0      AGCTTCGAGGGCGCCCGTAACAATCCGTTCACCTTCA 980
                                                           




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)