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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6466#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 812 fasta sequence
[TCATCCAGTGGTTCGGGCGGAACAAGAGATCCGCAGCGCAGGAGGACGACCCCACTGGCCAGCAGGAGCAGCATCTAGCAGAGCCGGTTACTCCGGAGCACGAGCAGTATCATCCGGCCGAGCCCAGGCCGGACCATCCCAGCAGCAGCAACAGCAACAGCAGCGAACCACCCTTGAGGTCCACGCCCAGCACGACCTTCCTCCGGGTGAGGATACGGAGGAGCTTACCGAGCCTCTTCTGCAGCAAGCTTCCCCCGGCAGGCAGTGCGCCCCGCACGGATCTCTAAAGGAAGCCCCGAAACACCAACCAGCAACAGTAACAGCAGTAGTAGCCGCATCGAGCAGTACGGCGCCGCAAGAACAGACCGCGTCAAAGGCACCGACAGCGCCACCCACCACCACAAAGCTGTCCCCGTCCTCATCTATCTCATCCTCGTCGCTATCCTCGAAAACGTCCAAAGCCTCCAAAACGTCCAACCGGCACCGGTTGCGCAAGAGCCGCTCGAAGGACGCACAAACGGAAATCGAGCACCCGAAGGCGCCGTTAGTGGTGGCGGAAGATTCGGAAGATTTGGACGGCGAAGAGGACGAGGAGGAGGAGGAGGAGCAAGAGAGGAAGAAAGGGGAAGCGATGGCCGAATCGCCGAACAATAGTAATAGCGCTGCGACGTACCGCGGGGAAGATCAGCGAACACTGAAGTCGTCCGGTTCGTCCTCCCGTTCAACGATCGTGCCCCGGGGACGGTAAGAGAAGGCGCTAATGCTGGAGTGCGCGATGACAAATCATTGCCGAGTTCTGGTCAGGCAGCAGC]
[+] EMBL BM626236 [TCATCCAGTGGTTCGGGCGGAACAAGAGATCCGCAGCGCAGGAGGACGACCCCACTGGCCAGCAGGAGCAGCATCTAGCAGAGCCGGTTACTCCGGAGCACGAGCAGTATCATCCGGCCGAGCCCAGGCCGGACCATCCCAGCAGCAGCAACAGCAACAGCAGCGAACCACCCTTGAGGTCCACGCCCAGCACGACCTTCCTCCGGGTGAGGATACGGAGGAGCTTACCGAGCCTCTTCTGCAGCAAGCTTCCCCCGGCAGGCAGTGCGCCCCGCACGGATCTCTAAAGGAAGCCCCGAAACACCAACCAGCAACAGTAACAGCAGTAGTAGCCGCATCGAGCAGTACGGCGCCGCAAGAACAGACCGCGTCAAAGGCACCGACAGCGCCACCCACCACCACAAAGCTGTCCCCGTCCTCATCTATCTCATCCTCGTCGCTATCCTCGAAAACGTCCAAAGCCTCCAAAACGTCCAACCGGCACCGGTTGCGCAAGAGCCGCTCGAAGGACGCACAAACGGAAATCGAGCACCCGAAGGCGCCGTTAGTGGTGGCGGAAGATTCGGAA ]
[+] EMBL BM590960 [TCATCCAGTGGTTCGGGCGGAACAAGAGATCCGCAGCGCAGGAGGACGACCCCACTGGCCAGCAGGAGCAGCATCTAGCAGAGCCGGTTACTCCGGAGCACGAGCAGTATCATCCGGCCGAGCCCAGGCCGGACCATCCCAGCAGCAGCAACAGCAACAGCAGCGAACCACCCTTGAGGTCCACGCCCAGCACGACCTTCCTCCGGGTGAGGATACGGAGGAGCTTACCGAGCCTCTTCTGCAGCAAGCTTCCCCCGGCAGGCAGTGCGCCCCGCACGGACCTCTAAAGGAAGCCCCGAAACACCAACCAGCAACAGTAACAGCAGTAGTAGCCGCATCGAGCAGTACGGCGCCGCAAGAACAGACCGCGTCAAAGGCACCGACAGCGCCACCCACCACCACAAAGCTGTCCCCGTCCTCATCTATCTCATCCTCGTCGCTATCCTCGAAAACGTCCAAAGCCTCCAAAACGTCCAACCGGCACCGGTTGCGCAAGAGC ]
[+] EMBL BM641138 [TCATCCAGTGGTTCGGGCGGAACAAGAGATCCGCAGCGCAGGAGGACGACCCCACTGGCCAGCAGGAGCAGCATCTAGCAGAGCCGGTTACTCCGGAGCACGAGCAGTATCATCCGGCCGAGCCCAGGCCGGACCATCCCAGCAGCAGCAACAGCAACAGCAGCGAACCACCCTTGAGGTCCACGCCCAGCACGACCTTCCTCCGGGTGAGGATACGGAGGAGCTTACCGAGCCTCTTCTGCAGCAAGCTTCCCCCGGCAGGCAGTGCGCCCCGCACGGATCTCTAAAGGAAGCCCCGAAACACCAACCAGCAACAGTAAC ]
[+] EMBL AGA282419 [ ACCACAAAGCTGTCCCCGTCCTCATCTATCTCATCCTCGTCGCTGTCGTCAAAAACGTCCAAAGCCTCCAAAACGTCCAACCGGCACCGGTTGCGCAAGAGCCGCTCGAAGGACGCACAAACGGAAATCGAGCACCCGAAGGCGCCGCTAGTGGTGGCGGAAGACTCGGAAGATTTGGACGGCGAAGAGGACGAGGAGGAGGAGGAGGAGCAAGAGAGGAAGAAAGGGGAAGCGATGGCCGAATCGCCGAACAATAGTAATAGCGCTGCGACGTACCGCGGGGAAGATCAGCGAACACTGAAGTCGTCCGGTTCGTCCTCCCGTTCAACGATCGTGCCCCGGGGACGGTAAGAGAAGGCGCTAATGCTGGAGTGCGCGATGACAAATCATTGCCGAGTTCTGGTCAGGCAGCAGC]
consensusID : consensus_6466#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 492 fasta sequence
[AAGATCCGCACGATNAAAAAGGGGAAGCGATGGCCGAACTCGCCGAACAATAGTAATAGCGCTGCGACGTACCGCGGGGAAGATCAGCGAACACTGAAGTCGTCCGGTTCGTCCTCCCGTTCAACGATCGTGCCCCGGGGACGGTAAGAGAAGGCGCTAATGCTGGAGTGCGCGATGACAAATCATTGCCGAGTTCTGGTCAGGCAGCAGCAGCATGTGTCCAGGGTGATATGGAGGTGATATTTATATTTCATCACCACTGGCAGGAACGGTGAAATCACATAGACATTAAGCTATTGCAACTGATTGGTGGCGTTCGTTAAGCTGCACCCTACAGGTGTGACCGTGACAAACAAGTAAAACAGCTAGTATATCCTTGACTGATCGTACTCCACTCTGTGAGATGTGGGTACCGTCCTGGGCTGTCTGAATCACGCAAGGTTAGGGAGAGGAGAATGCGAGCGACACNCNNACATTGAGAGGACCAAAATA]
[+] EMBL BX466116 [AAGATCCGCACGATNAAAAAGGGGAAGCGATGGCCGAACTCGCCGAACAATAGTAATAGCGCTGCGACGTACCGCGGGGAAGATCAGCGAACACTGAAGTCGTCCGGTTCGTCCTCCCGTTCAACGATCGTGCCCCGGGGACGGTAAGAGAAGGCGCTAATGCTGGAGTGCGCGATGACAAATCATTGCCGAGTTCTGGTCAGGCAGCAGCAGCATGTGTCCAGGGTGATATGGAGGTGATATTTATATTTCATCACCACTGGCAGGAACGGTGAAATCACATAGACATTAAGCTATTGCAACTGATTGGTGGCGTTCGTTAAGCTGCACCCTACAGGTGTGACCGTGACAAACAAGTAAAACAGCTAGTATATCCTTGACTGATCGTACTCCACTCTGTGAGATGTGGGTACCGTCCTGGGCTGTCTGAATCACGCAAGGTTAGGGAGAGGAGAATGCGAGCGACACNCNNACATTGAGAGGACCAAAATA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6466#0 TCATCCAGTGGTTCGGGCGGAACAAGAGATCCGCAGCGCAGGAGGACGACCCCACTGGCC 60
consensus_6466#1 ------------------------------------------------------------
consensus_6466#0 AGCAGGAGCAGCATCTAGCAGAGCCGGTTACTCCGGAGCACGAGCAGTATCATCCGGCCG 120
consensus_6466#1 ------------------------------------AAGATCCGCACGATNAAAAAGGGG 24
* * *** ** * * *
consensus_6466#0 AGCCCA-GGCCGGACCATCCCAGCAGCAGCAACAGCAACAGCAGCGAACCACCCTTGAGG 179
consensus_6466#1 AAGCGATGGCCGAACTCGCCGAACAATAGTAATAGCG-CTGCGACGTACCGCGGGGAAGA 83
* * * ***** ** ** * ** ** ** *** * ** ** *** * **
consensus_6466#0 TCCACGCCCAGCACGACCTTCCTCCGGGTGAGGATACGGAGGAGCTTACCGAGCCTCTTC 239
consensus_6466#1 TCAGCG---AACACTGAAGTCGTCCGGTTCGTCCTCCCGTTCAACG-ATCGTGCCCCGGG 139
** ** * *** ** ***** * * * * * * * ** *** *
consensus_6466#0 TGCAGCAAGCTTCCCCCGGCAGGCAGTGCGCCCCGCACGGATCTCTAAAGGAAGCCCCGA 299
consensus_6466#1 GACGGTAAG--------AGAAGGCGCTAATGCTGGAGTGCGCGATGACAAATCATTGCCG 191
* * *** * **** * * * * * * *
consensus_6466#0 AACACCAACCAGCAACAGTAACAGCAGTAGTAGCCGCATCGAGCAGTACGGCGCCG-CAA 358
consensus_6466#1 AGTTCTGGTCAG--------GCAGCAGCAGCATGTGTCCAGGGTGATATGGAGGTGATAT 243
* * *** ****** ** * * * * ** ** * * *
consensus_6466#0 GAACAGACCG-CGTCAAAGGCACCGACAGCGCCACC-CACCACCACAAAGCTGTCCCCGT 416
consensus_6466#1 TTATATTTCATCACCACTGGCAGGAACGGTGAAATCACATAGACATTAAGCTATTGCAA- 302
* * * * ** **** ** * * * * ** ** ***** * *
consensus_6466#0 CCTCATCTATCTCATCCTCGTCGCTATCCTCGAAAACGTCCAAAGCCTCCAAAACGTCCA 476
consensus_6466#1 -CTGATTGGTGGCGTTCGTTAAGCTGCACCCTACAGGTGTGACCGTGACAAACAAGTAAA 361
** ** * * * * *** * * * * * * * ** * ** *
consensus_6466#0 ACCGGCACCGGTTGCGCAAGAGCCGCTCGAAGGACGCACAAACGGAAATCGAGCACCCGA 536
consensus_6466#1 ACAGCTAGTATATCCTTGA---CTGATCGTACTCCACTCTG-TGAGATGTGGGTACCGTC 417
** * * * * * * * *** * * * * * * * * ***
consensus_6466#0 AGGCGCCGTTAGTGGTGGCGGAAGATTCGGAAGATTTGGACGGCGAAGAGGACGAGGAGG 596
consensus_6466#1 CTGGGCTGTCTG-AATCACGCAAGGTTAGGGAGAGGAGAATG-CGAGCGACACNCNNACA 475
* ** ** * * ** *** ** ** *** * * * *** ** *
consensus_6466#0 AGGAGGAGGAGCAAGAGAGGAAGAAAGGGGAAGCGATGGCCGAATCGCCGAACAATAGTA 656
consensus_6466#1 TTGAG-AGGACCAAAATA------------------------------------------ 492
*** **** *** * *
consensus_6466#0 ATAGCGCTGCGACGTACCGCGGGGAAGATCAGCGAACACTGAAGTCGTCCGGTTCGTCCT 716
consensus_6466#1 ------------------------------------------------------------
consensus_6466#0 CCCGTTCAACGATCGTGCCCCGGGGACGGTAAGAGAAGGCGCTAATGCTGGAGTGCGCGA 776
consensus_6466#1 ------------------------------------------------------------
consensus_6466#0 TGACAAATCATTGCCGAGTTCTGGTCAGGCAGCAGC 812
consensus_6466#1 ------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||