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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6494#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1073 fasta sequence
[CCNGAGGTTTGTTAAGGGTGTGTCTGGTGCGCGTGCGCCCGAACGGCGAGCTCATGAGCGGCCCGTTCTCCCCGGTGCTGACCCACCATCTCGCGACGAACGTGCCGCGGTCGAGCAGTGGGGCGGGTCGGTCCGGTGGAGCCGGCCACACCACGGACGACGTCGACGGGCTGCACCCCGTTCCAGTGCAATGTGGTCAACAGCAAGGGTGAGTTGGTGCTTGACGACCAAATCGTCTGACCGGGGCTGTGGCCTGCTGCTGGCCGGTNAGCAATAACGGGTACGTGTCCTGGACTGGCGACGGTCACCAGCACGGTGGCGCGCAGCGATACGGTCGCGTCGACCACGCTCCAGCAGCTTGCAGAAGTTCTTCGAGCCCGACTCGAGCAAAGCGGTCGTGTTGCGTGTTNTTGCGCTCTTCCTGCTGTCCATCATCGTGGNCGCATTCCTCAAGTAAAGCGCCTCCCCGGTGCCGACAAGTGCTCTCCCTCCATCCCCGCGCTCCGTATGCCCGCTATATTGTGTTGTCCTTGTCGATGTTGTTGGCTTGTACCGTCGGCGGGAATCCGTCGCTTCCTATGTCTTAACGAATGTACTAGCTGAGAAAAGTAACCTTTTCCTGCGTACACCACACATACA-CCACATTACGCAGAAAGGGAAGAGAGAGAGAGACGGAGATGTGCAGGTGTAATTGCAAAACAAAAAGTGCAGAACGAGAACGAAACACGAAGAGAAGTGTGTGGTATAATTATGAAACATAAATATTGATATAAAACAAAAATACATACACAAAAACCAACATTAAGCAAAACAAACAAGCAAACAAAACAAAAAATCATGTGATGTGCGCACTAACCTATACTTTATGCAATTATTAGTCTACTCTCACAATCAAAATGTATGTTTGCATCATCAAAACCCAGAGCAGGAGAAAGCACCGATTGAAGAGGAAAGAACAAAACACCGGCGAGCAAGTAAAAAACAGAACCAGTAATAGCACTATTTGCTGACAAAAAAACCATCCCGCTCCTCGCCACACAGGGCACAGGGCAACCCATCCATGGCTGGTAGAA]
[+] EMBL AL694654 [CCNGAGGTTTGTTAAGGGTGTGTCTGGTGCGCGTGCGCCCGAACGGCGAGCTCATGAGCGGCCCGTTCTCCCCGGTGCTGACCCACCATCTCGCGACGAACGTGCCGCGGTCGAGCAGTGGGGCGGGTCGGTCCGGTGGAGCCGGCCACACCACGGACGACGTCGACGGGCTGCACCCCGTTCCAGTGCAATGTGGTCAACAGCAAGGGTGAGTTGGTGCTTGACGACCAAATCGTCTGACCGGGGCTGTGGCCTGCTGCTGGCCGGTNAGCAATAACGGGTACGTGTCCTGGACTGGCGACGGTCACCAGCACGGTGGCGCGCAGCGATACGGTCGCGTCGACCACGCTCCAGCAGCTTGCAGAAGTTCTTCGAGCCCGACTCGAGCAAAGCGGTCGTGTTGCGTGTTNTTGCGCTCTTCCTGCTGTCCATCATCGTGGNCGCATTCCTCAAGTAAAGCGCCTCCCCGGTGCCGACAAGTGCTCTCCCTCCATCCCCGCGCTCCGTATGCCCGCTATATTGTGTTGTCCTTGTCGATGTTGTTGGCTTGTACCGTCGGCGGGAATCCGTCGCTTCCTATGTCTTAACGAATGTACTAGCTGAGAAAAGTAACCTTTTCCTGCGTACACCACACATACA CCACATTACGCAGAAAGGGAAGAGAGAGAGAGACGGAGATGTGCAGG ]
[+] EMBL BM583446 [ ccgCCGCGCTCCGTATGCCCGCTATATTGTGTTGTCCTTGTCGATGTTGTTGCCTTGT CCGTCGCCGGGAATCCGTCGCTTCCTATGTC TAACGAATGTACTAGCTGAGAAAAGTAACCTTTTCCTGC TACA CACACATACACCCACATTACG A AAAAGGAAGAGAGAGAGAGAGGGAGATGTGCAGGTGTAATTGCAAAACAAAAAGTGCAGAACGAGAACGAAACACGAAGAGAAGTGTGTGGTATAATTATGAAACATAAATATTGATATAAAACAAAAATACATACACAAAAACCAACATTAAGCAAAACAAACAAGCAAACAAAACAAAAAATCATGTGATGTGCGCACTAACCTATACTTTATGCAATTATTAGTCTACTCTCACAATCAAAATGTATGTTTGCATCATCAAAACCCAGAGCAGGAGAAAGCACCGATTGAAGAGGAAAGAACAAAACACCGGCGAGCAAGTAAAAAACAGAACCAGTAATAGCACTATTTGCTGACAAAAAAACCATCCCGCTCCTCGCCACACAGGGCACAGGGCAACCCATCCATGGCTGGTAGAA]
consensusID : consensus_6494#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 732 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGGAAACGCTCTTTACTGTACACAACCTGCAGCACGGCGTGACGTACGCGTTCAAGGTGTGTCCGGTGCGCGTGCGCCCGAACGGCGAGCTCATGAGCGGCCCGTTCTCCCCGGTGCTGACCCACCATCTCGCGACGAACGTGCCGCGGTCGAGCAGTGGGGCGGGTCGGTCCGGTGGAGCCGGCCACACCACGGACGACGTCGACGGGCGCACCCCGTTCCAGGGCAATGTGGTCAACAGCAAGGGTGAGTTGGTGCTGACGACCAAATCGTCGACCGGGGCGGGCCTGCTGCTGGCCGGCAGCAATAACGGGTACGGTCCGGACGGCGACGGTCACCAGCACGGGGCGCGCAGCGATACGGTCGCGTCGACCACGCTCCAGCAGCTGCAGAAGTTCTTCGAGCCCGACTCGAGCAAAGCGGTCGTGTGCGTGTTTGCGCTCTTCCTGCTGTCCATCATCGTGGCCGCATTCCTCAAGTAAAGCGCCTCCCCGGTGCCGACAAGTGCTCTCCCTCCATCCCCGCGCTCCGTATGCCCGCTATATTGTGTTGTCCTTGTCGATGTTGTTGCCTTGTCCGTCGGGAATCCGTCGCTTCCTATGTCTAACGAATGTACTAGCTGAGAAAAGTAACCTTTTCCTGCTACACACACATACACCCACATTACGAGAAAGGAAGAGAGAGAGAGAGGGAGATGTGCAGGTGTA]
[+] EMBL BM589747 [CCGCCCACGCGTCCGCCCACGCGTCCGGAAACGCTCTTTACTGTACACAACCTGCAGCACGGCGTGACGTACGCTTTCAAGGTGTGTCCGGTGCGCGTGCGCCAGAACGGTGAGCTCATGAGCGGCCCGTTCTCCCCGGTGCTGACCCACCATCTCGCGACG ]
[-] EMBL AGA285888 [ AAACGCGCTTAACTGTACACAACCTGCAGCACGGCGTGACGTACGCGTTCAAGGTGTGTCCGGTGCGCGTGCGCCCGAACGGCGAGCTCATGAGCGGCCCGTTCTCCCCGGTGCTGACCCACCATCTCGCGACGAACGTGCCGCGGTCGAGCAGTGGGGCGGGTCGGTCCGGTGGAGCCGGCCACACCACGGACGACGTCGACGGGCGCACCCCGTTCCAGGGCAATGTGGTCAACAGCAAGGGTGAGTTGGTGCTGACGACCAAATCGTCGACCGGGGCGGGCCTGCTGCTGGCCGGCAGCAATAACGGGTACGGTCCGGACGGCGACGGTCACCAGCACGGGGCGCGCAGCGATACGGTCGCGTCGACCACGCTCCAGCAGCTGCAGAAGTTCTTCGAGCCCGACTCGAGCAAAGCGGTCGTGTGCGTGTTTGCGCTCTTCCTGCTGTCCATCATCGTGGCCGCATTCCTCAAGTAAAGCGCCTCCCCGGTGCCGACAAGTGCTCTCCCTCCATCCCCGCGCTCCGTATGCCCGCTATATTGTGTTGTCCTTGTCGATGTTGTTGCCTTG ]
[+] EMBL BX623506 [ CCTGCAGCACGGCGTGACGTACGCGTTCAAGGTGTGTCCGGTGCGCGTGCGCCCGAACGGCGAGCTCATGAGCGGCCCGTTCTCCCCGGTGCTGACCCACCATCTCGCGACGAACGTGCCGCGGTCGAGCAGTGGGGCGGGTCGGTCCGGTGGAGCCGGCCACACCACGGACGACGTCGACGGGCGCACCCCGTTCCAGGGCAATGTGGTCAACAGCAAGGGTGAGTTGGTGCTGACGACCAAATCGTCGACCGGGGCGGGCCTGCTGCTGGCCGGCAGCAATAACGGGTACGGTCCGGACGGCGACGGTCACCAGCACGGGGCGCGCAGCGATACGGTCGCGTCGACCACGCTCCAGCAGCTGCAGAAGTTCTTCGAGCCCGACTCGAGCAAAGCGGTCGTGTGCGTGTTTGCGCTCTTCCTGCTGTCCATCATCGTGGCCGCATTCCTCAAGTAAAGCGCCTCCCCGGTGCCGACAAGTGCTCTCCCTCCATCCCCGCGCTCCGTATGCCCGCTATATTGTGTTGTCCTTGTCGATGTTGTTGCCTTGTCCGTCGGGAATCCGTCGCTTCCTATGTCTAACGAATGTACTAGCTGAGAAAAGTAACCTTTTCCTGCTACACACACATACACCCACATTACGAGAAAGGAAGAGAGAGAGAGAGGGAGATGTGCAGGTGTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6494#0 ------------------------------------------------------------
consensus_6494#1 CCGCCCACGCGTCCGCCCACGCGTCCGGAAACGCTCTTTACTGTACACAACCTGCAGCAC 60
consensus_6494#0 --CCNGAGGTTTG--TTAAGGGTGTGTCTGGTGCGCGTGCGCCCGAACGGCGAGCTCATG 56
consensus_6494#1 GGCGTGACGTACGCGTTCAAGGTGTGTCCGGTGCGCGTGCGCCCGAACGGCGAGCTCATG 120
* ** ** * ** * ******** *******************************
consensus_6494#0 AGCGGCCCGTTCTCCCCGGTGCTGACCCACCATCTCGCGACGAACGTGCCGCGGTCGAGC 116
consensus_6494#1 AGCGGCCCGTTCTCCCCGGTGCTGACCCACCATCTCGCGACGAACGTGCCGCGGTCGAGC 180
************************************************************
consensus_6494#0 AGTGGGGCGGGTCGGTCCGGTGGAGCCGGCCACACCACGGACGACGTCGACGGGCTGCAC 176
consensus_6494#1 AGTGGGGCGGGTCGGTCCGGTGGAGCCGGCCACACCACGGACGACGTCGACGGGC-GCAC 239
******************************************************* ****
consensus_6494#0 CCCGTTCCAGTGCAATGTGGTCAACAGCAAGGGTGAGTTGGTGCTTGACGACCAAATCGT 236
consensus_6494#1 CCCGTTCCAGGGCAATGTGGTCAACAGCAAGGGTGAGTTGGTGCT-GACGACCAAATCGT 298
********** ********************************** **************
consensus_6494#0 CTGACCGGGGCTGTGGCCTGCTGCTGGCCGGTNAGCAATAACGGGTACGTGTCCTGGACT 296
consensus_6494#1 C-GACCGGGGCGG--GCCTGCTGCTGGCCGG-CAGCAATAACGGGTACG-GTCC-GGAC- 351
* ********* * **************** **************** **** ****
consensus_6494#0 GGCGACGGTCACCAGCACGGTGGCGCGCAGCGATACGGTCGCGTCGACCACGCTCCAGCA 356
consensus_6494#1 GGCGACGGTCACCAGCACGG-GGCGCGCAGCGATACGGTCGCGTCGACCACGCTCCAGCA 410
******************** ***************************************
consensus_6494#0 GCTTGCAGAAGTTCTTCGAGCCCGACTCGAGCAAAGCGGTCGTGTTGCGTGTTNTTGCGC 416
consensus_6494#1 GCT-GCAGAAGTTCTTCGAGCCCGACTCGAGCAAAGCGGTCGTGT---GCGTGTTTGCGC 466
*** ***************************************** * ** ******
consensus_6494#0 TCTTCCTGCTGTCCATCATCGTGGNCGCATTCCTCAAGTAAAGCGCCTCCCCGGTGCCGA 476
consensus_6494#1 TCTTCCTGCTGTCCATCATCGTGGCCGCATTCCTCAAGTAAAGCGCCTCCCCGGTGCCGA 526
************************ ***********************************
consensus_6494#0 CAAGTGCTCTCCCTCCATCCCCGCGCTCCGTATGCCCGCTATATTGTGTTGTCCTTGTCG 536
consensus_6494#1 CAAGTGCTCTCCCTCCATCCCCGCGCTCCGTATGCCCGCTATATTGTGTTGTCCTTGTCG 586
************************************************************
consensus_6494#0 ATGTTGTTGGCTTGTACCGTCGGCGGGAATCCGTCGCTTCCTATGTCTTAACGAATGTAC 596
consensus_6494#1 ATGTTGTTGCCTTGT----CCGTCGGGAATCCGTCGCTTCCTATGTCT-AACGAATGTAC 641
********* ***** ** ************************* ***********
consensus_6494#0 TAGCTGAGAAAAGTAACCTTTTCCTGCGTACACCACACATACACC-ACATTACGCAGAAA 655
consensus_6494#1 TAGCTGAGAAAAGTAACCTTTTCCTGC-TACAC-ACACATACACCCACATTACG--AGAA 697
*************************** ***** *********** ******** **
consensus_6494#0 GGGAAGAGAGAGAGAGACGGAGATGTGCAGGTGTAATTGCAAAACAAAAAGTGCAGAACG 715
consensus_6494#1 AGGAAGAGAGAGAGAGAGGGAGATGTGCAGGTGTA------------------------- 732
**************** *****************
consensus_6494#0 AGAACGAAACACGAAGAGAAGTGTGTGGTATAATTATGAAACATAAATATTGATATAAAA 775
consensus_6494#1 ------------------------------------------------------------
consensus_6494#0 CAAAAATACATACACAAAAACCAACATTAAGCAAAACAAACAAGCAAACAAAACAAAAAA 835
consensus_6494#1 ------------------------------------------------------------
consensus_6494#0 TCATGTGATGTGCGCACTAACCTATACTTTATGCAATTATTAGTCTACTCTCACAATCAA 895
consensus_6494#1 ------------------------------------------------------------
consensus_6494#0 AATGTATGTTTGCATCATCAAAACCCAGAGCAGGAGAAAGCACCGATTGAAGAGGAAAGA 955
consensus_6494#1 ------------------------------------------------------------
consensus_6494#0 ACAAAACACCGGCGAGCAAGTAAAAAACAGAACCAGTAATAGCACTATTTGCTGACAAAA 1015
consensus_6494#1 ------------------------------------------------------------
consensus_6494#0 AAACCATCCCGCTCCTCGCCACACAGGGCACAGGGCAACCCATCCATGGCTGGTAGAA 1073
consensus_6494#1 ----------------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||