Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 6505 cluster # 6505       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6505#0 length = 1025 sequences # 5  

consensusID : consensus_6505#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1025
fasta sequence
                              [CCGCGAAACACGAACCCTAAGCATACAAGTCCAGTGACGCTCTCGCAAACAACGCGCCCGCTCTGACGCAGGGAAGCCAAACGACACATCACATTGCAATTAAAACCGTCTACAGCTCCTGTAGACTGCCTCTGCTTCTATCAACCTATCAAACGTCGTATTTCAAACCTAGCAGCGTCCATCCGTGTCTCTCCAAGTTCTGTGCTTGCGTATCCGTGGCTGTGTGTGTGTGTGTGCGCGCGTGGTTGTTCGGCATCAATCTAGTTTAGTGGCGCGTTGATTGTGTTCATCCCTTTAAACCCTTCGCTGTGTGAGTGTGCGAACATAGTTTCAACATGAGTATGCCCGATGTTGTCGACATTAGAAATGAAATAAACAAAGAGCATGTGCGGGAGAGCTTGGACCGGAACGGCGACGAGCAACAGCTGGTGCAGGACGTAAACGATGCGCTCGGTACGCGCAAGGGCCACGATCCCACAAACCATCTCGTGCGGGCGCGGATGCCCGTCGAGCGGTACGCGTG-CGACTACAACATGAACCACAAGCGGCGCGGGCTGGCGCTCATTTTCAACCACGAAAACTTCGACGTGCCGCAGCTCCGGTCGCGCGCCGGAACGAACGT-GGACTGCGAGAAC-CTGACCGCCTCGCTCAAGGGTCTCGACTTCGAGGTGCACGTGTTCAAGGATCTGAAGCTCCGCGACCTACAGAAGGAGGTCGAACGAGTTTCACAGATGGACCATAGCGACGCGGACTGCCTGCTGGTGACGATCCTGTCGCACGGCGAACTCGGCTACCTGTACGCCAAGGACTGCCAGTACAAGCTCGACACGATCTGGACGTACTTCACGGCCAACCACTGCCCGTCGCTCGCCGGCAAGCCGAAGCTGTTCTTCATACAGGCCTGCCAGGGCGACCAGCT-GACGGTGGCGTGGTGCTCGAGGCGAAGGATCGCACCGAAACGGACAGCTCCTCCTCGATGCTGACGTTCAAGATACCGATGTACGCTGACTTCATGGGGGACATGA]

[+] EMBL BM605062             [CCGCGAAACACGAACCCTAAGCATACAAGTCCAGTGACGCTCTCGCAAACAACGCGCCCGCTCTGACGCAGGGAAGCCAAACGACACATCACATTGCAATTAAAACCGTCTACAGCTCCTGTAGACTGCCTCTGCTTCTATCAACCTATCAAACGTCGTATTTCAAACCTAGCAGCGTCCATCCGTGTCTCTCCAAGTTCTGTGCTTGCGTATCCGTGGCTGTGTGTGTGTGTGTGCGCGCGTGGTTGTTCGGCATCAATCTAGTTTAGTGGCGCGTTGATTGTGTTCATCCCTTTAAACCCTTCGCTGTGTGAGTGTGCGAACATAGTTTCAACATGAGTATGCCCGATGTTGTCGACATTAGAAATGAAATAAACAAAGAGCATGTGCGGGAGAGCTTGGACCGGAACGGCGACGAGCAACAGCTGGTGCAGGACGTAAACGATGCGCTCGGTACGCGCAAGGGCCACGATCCCACAAACCATCTCGTGCGGGCGCGGATGCCCGTCGAGCGGTACGCGTG CGACTACAACATGAACCACAAGCGGCGCGGGCTGGCGCTCATTTTCAACCACGAAAACTTCGACGTGCCGCAGCTCCGGTCGCGCGCCGGAACGAACGT GGACTGCGAGAAC CTGACCGCCTCGCTCAA                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX628611             [          CGAACCCTAAGCATACAAGTCCAGTGACGCTCTCGCAAACAACGCGCCCGCTCTGACGCAGGGAAGCCAAACGACACATCACATTGCAATTAAAACCGTCTACAGCTCCTGTAGACTGCCTCTGCTTCTATCAACCTATCAAACGTCGTATTTCAAACCTAGCAGCGTCCATCCGTGTCTCTCCAAGTTCTGTGCTTGCGTATCCGTGGCTGTGTGTGTGTGTGTGCGCGCGTGGTTGTTCGGCATCAATCTAGTTTAGTGGCGCGTTGATTGTGTTCATCCCTTTAAACCCTTCGCTGTGTGAGTGTGCGAACATAGTTTCAACATGAGTATGCCCGATGTTGTCGACATTAGAAATGAAATAAACAAAGAGCATGTGCGGGAGAGCTTGGACCGGAACGGCGACGAGCAACAGCTGGTGCAGGACGTAAACGATGCGCTCGGTACGCGCAAGGGCCACGATCCCACAAACCATCTCGTGCGGGCGCGGATGCCCGTCGAGCGGTACGCGTG CGACTACAACATGAACCACAAGCGGCGCGGGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CNS0931G             [                                      ggTCTCGCAAACAACGCGCCCGCTCTGACGCAGGGAAGCCAAACGACACATCACATTGCAATTAAAACCGTCTACAGCTCCTGTATACTGCCTCTGCTTCTATCAACCTATCAAACGTCGTATTTCAAACCTAGCAGCGTCCATCCGTGTCTCTCCAAGTTCTGTGCTTGCGTATCCGTGGC  TGTGTGTGTGTGTGCGCGCGTGGTTGTTCGGCATCAATCTAGTTTAGTGGCGCGTTGATTGTGTTCATCCCTTTAAACCCTTCGCTGTGTGAGTGTGCGAACATAGTTTCAACATGAGTATGCCCGATGTTGTCGACATTAGAAATGAAATAAACAAAGAGCATGTGCGGGAGAGCTTGGACCGGAACGGCGACGAGCAACAGCTGGTGCAGGACGTAAACGATGCGCTCGGTACGCGCAAGGGCCACGATCCCACAAACCATCTCGTGCGGGCGCGGATGCCCGTCGAGCGGTACGCGTG CGACTACAACATGAACCACAAGCGGCGCGGG TGGCGCTCATTTTCAACCACGAAAACTTCGACGTGCCGCAGCTCCGGTCGCGCGCCGGAACGAACGT GGACTGCGAGAACGCTGACCGCCTCGCTCAAGGGTCTCGACTTCGAGGTGCACGTGTTCAAGGATCTGAAGCTCCGCGACCTACAGAAGGAGGTCGAACGAGTTTCACAGATGGACCATAGCGACGCGGACTGCCTGCTGGTGACGATCCTGTCGCACGGCGAACTCGGCTACCTGTACGCCAAGGACTGCCAGTACAAGCTCGACACGATCTGGACGTACTTCACGGCCAACCACTGCCCGTCGCTCGCCGGCAAGCCGAAGCTGTTCTTCATACAGGCCTGCCAGGGCGACCAGCT GACGGT                                                                                                    ]
[+] EMBL CNS0931F             [                                         CTCGCAAACAACGCGCCCGCTCTGACGCAGGGAAGCCAAACGACACATCACATTGCAATTAAAACCGTCTACAGCTCCTGTAGACT CCTCTGCTTCTATCAACCTATCAAACGTCGTATTTCAAACCTAGCAGCGTCCATCCGTGTCTCTCCAAGTTCTGTGCTTGCGTATCCGTGGC  TGTGTGTGTGTGTGCGCGCGTGGTTGTTCGGCATCAATCTAGTTTAGTGGCGCGTTGATTGTGTTCATCCCTTTAAACCCTTCGCTGTGTGAGTGTGCGAACATAGTTTCAACATGAGTATGCCCGATGTTGTCGACATTAGAAATGAAATAAACAAAGAGCATGTGCGGGAGAGCTTGGACCGGAACGCCGACGAGCAACAGCTGGTGCAGGACGTAAACGATGCGCTCGGTACGCGCAAGGGCCACGATCCCACAAACCATCTCGTGCGGGCGCGGATGCCCGTCGAGCGGTACGCTTGTCGACTACAACATGAACCACAAGCGGCGCGGGCTGGCGCTCATTTTCAACCACGAAAACTTCGACGTGCCGCAGCTCCGGTCGCGCGCCGGAACGAACGT  GACTGCGAGAAC CTGACCGCCTCGCTCAAGGGTCTCGACTTCGAGGTGCACGTGTTCAAGGATCTGAAGCTCCGCGACCTACAGAAGGAGGTCGAACGAGTTTCACAGATGGACCATAGCGACGCGGACTGCCTGCTGGTGACGATCCTGTCGCACGGCGAACTCGGCTACCTGTACGCCAAGGACTGCCAGTACAAGCTCGACACGATCTGGACGTACTTCACGGCCAACCACTGCCCGTCGCTCGCCGGCAAGCCGAAGCTGTTCTTCATACAGGCCTGCCAGGGCGACCAGCTGGACGGTGGCGTGGTGCTCGAGGCGAAGGATCGCACCGAAACGGACAGCTCCTCCTCGATGCTGACGTTCAAGATACCGATGTACGCTGACTTCATGGGGGACATGA]
[+] EMBL BM597793             [                                        ccgCGCAAACAACGCGCCCGCTCCGACGCAGGGAAGCCAAACGACACATCACATTGCAATTAAAACCGTCTACAGCTCCTGTAGACTGCCTCTGCTTCTATCAACCTATCAAACGTCGTATTTCAAACCTAGCAGCGTCCATCCGTGTCTCTCCAAGTTCTGTGCTTGCGTATCCGTGGCTGTGTGTGTGTGTGTGTGCGCGTGGTTGTTCGGCATCAATCTAGTTTAGTGGCGCGTTGATTGTGTTCATCCCTTTAAACCCTTCGCTGTGTGAGTGTGCGAACATAGTTTCAACATGAGTATGCCCGATGTTGTCGACATTAGAAATGAAATAAACAAAGAGCATGTGCGGGAGAGCTTGGACCGGAACGGCGACGAACAACAGCTGGTGCAGGACGTAAACGATGCGCTCGGTACGCGCAAGGGCCACGATCCCACAAACCATCTCGTGCGGGCGCGGATGCCCGTCGAGCGGTACGCGTG CGACTACAACATGAACCACAAGCGGCGCGGGCTGGCGCTCATTTTCAACCACGAAAACTTCGACGTGCCGCAGCTTCGGTCGCGCGCCGGAACGAACGTGGGACTGCGAGAAC CTGACCGCCTCGCTCAAGGGTCTCGACTTCGAGGTGCACGTGTTCAAGGATCTGAAGCTCCGCGACCTACAGAAGGAGGT                                                                                                                                                                                                                                                                                                                       ]


>consensus_6505#0 CCGCGAAACACGAACCCTAAGCATACAAGTCCAGTGACGCTCTCGCAAACAACGCGCCCG CTCTGACGCAGGGAAGCCAAACGACACATCACATTGCAATTAAAACCGTCTACAGCTCCT GTAGACTGCCTCTGCTTCTATCAACCTATCAAACGTCGTATTTCAAACCTAGCAGCGTCC ATCCGTGTCTCTCCAAGTTCTGTGCTTGCGTATCCGTGGCTGTGTGTGTGTGTGTGCGCG CGTGGTTGTTCGGCATCAATCTAGTTTAGTGGCGCGTTGATTGTGTTCATCCCTTTAAAC CCTTCGCTGTGTGAGTGTGCGAACATAGTTTCAACATGAGTATGCCCGATGTTGTCGACA TTAGAAATGAAATAAACAAAGAGCATGTGCGGGAGAGCTTGGACCGGAACGGCGACGAGC AACAGCTGGTGCAGGACGTAAACGATGCGCTCGGTACGCGCAAGGGCCACGATCCCACAA ACCATCTCGTGCGGGCGCGGATGCCCGTCGAGCGGTACGCGTGCGACTACAACATGAACC ACAAGCGGCGCGGGCTGGCGCTCATTTTCAACCACGAAAACTTCGACGTGCCGCAGCTCC GGTCGCGCGCCGGAACGAACGTGGACTGCGAGAACCTGACCGCCTCGCTCAAGGGTCTCG ACTTCGAGGTGCACGTGTTCAAGGATCTGAAGCTCCGCGACCTACAGAAGGAGGTCGAAC GAGTTTCACAGATGGACCATAGCGACGCGGACTGCCTGCTGGTGACGATCCTGTCGCACG GCGAACTCGGCTACCTGTACGCCAAGGACTGCCAGTACAAGCTCGACACGATCTGGACGT ACTTCACGGCCAACCACTGCCCGTCGCTCGCCGGCAAGCCGAAGCTGTTCTTCATACAGG CCTGCCAGGGCGACCAGCTGACGGTGGCGTGGTGCTCGAGGCGAAGGATCGCACCGAAAC GGACAGCTCCTCCTCGATGCTGACGTTCAAGATACCGATGTACGCTGACTTCATGGGGGA CATGA



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)