These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_658#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 657 fasta sequence [CCGTGCCAACGGCGTTTCACCGATACTCTCAAAACAGAAGTCCTTCAGCTGTGGCAAGCACCGCTTGGTCGTTGTGTTCCCTCATACGAAGCGATCGAAAATTATCCTTCCGTGATTTTGGGTGGTGCAGGAAAAGTGAAAGTTTCGCCGTTTAATTTTCATTACGTTTTGTGCTGCTTCTCTTCCAATTCCACCATCACGTCTAACCTGACGTTTTTTGTGTGGATTGGACACGACTTTGCTAGATTTAATGTGAATTTTACATTACCTACCCGATGCCTGTCGTGTGATGTGTGAGTTTGTGTGTGTGATCCGCATTAAAGCTGAATGAATCTTTCGTGCCTTACTGTTGGTTGATAATGTCACCAAGGAGCAATTTGTAGCAGAACCCACAAATTGCAAACATATGTCCGGTTTTCTGAGTTGTGCAACGATTAATTATTGCTGGAGCCTAGAATTGCTTGTGTGTGAATGTGCGAAGCGCTTCTGGTGCTAGTAAAAACGCAAAGTTTGTCCGCTTCGCAATAAAGTGTCTTAAATAACACTAGGGAAAACTCATCACCGTTGCGATAGTACGATAACAAATTGCAACCATTGATAATCGCGTGCAGCGGTGTAAGGCTGGTGCGAAGAAGAAAAGAATCAACTTCTTCAAGT] [+] EMBL BM628995 [CCGTGCCAACGGCGTTTCACCGATACTCTCAAAACAGAAGTCCTTCAGCTGTGGCAAGCACCGCTTGGTCGTTGTGTTCCCTCATACGAAGCGATCGAAAATTATCCTTCCGTGATTTTGGGTGGTGCAGGAAAAGTGAAAGTTTCGCCGTTTAATTTTCATTACGTTTTGTGCTGCTTCTCTTCCAATTCCACCATCACGTCTAACCTGACGTTTTTTGTGTGGATTGGACACGACTTTGCTAGATTTAATGTGAATTTTACATTACCTACCCGATGCCTGTCGTGTGATGTGTGAGTTTGTGTGTGTGATCCGCATTAAAGCTGAATGAATCTTTCGTGCCTTACTGTTGGTTGATAATGTCACCAAGGAGCAATTTGTAGCAGAACCCACAAATTGCAAACATATGTCCGGTTTTCTGAGTTGTGCAACGATTAATTATTGCTGGAGCCTAGAATTGCTTGTGTGTGAATGTGCGAAGCGCTTCTGGTGCTAGTAAAAACGCAAAGTTTGTCCGCTTCGCAATAAAGTGTCTTAAATAACACTAGGGAAAACTCATCACCGTTGCGATAGTACGATAACAAATTGCAACCATTGATAATCGCGTGCAGCGGTGTAAGGCTGGTGCGAAGAAGAAAAGAATCAACTTCTTCAAGT] consensusID : consensus_658#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 158 fasta sequence [CCGCCCACGCGTCCGGAGTTGTGCAACGATTAATTATTGCTGGAGCCTAGAATTGCTTGTGTGTGAATGTGCGAAGCGCTTCTGGTGCTAGTAAAAACGCAAAGTTTGTCCGCTTCGCAATAAAGTGTCTTAAATAACACTAGGGAAAACTCATCACC] [+] EMBL BM620259 [CCGCCCACGCGTCCGGAGTTGTGCAACGATTAATTATTGCTGGAGCCTAGAATTGCTTGTGTGTGAATGTGCGAAGCGCTTCTGGTGCTAGTAAAAACGCAAAGTTTGTCCGCTTCGCAATAAAGTGTCTTAAATAACACTAGGGAAAACTCATCACC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_658#0 CCGTGCCAACGGCGTTTCACCGATACTCTCAAAACAGAAGTCCTTCAGCTGTGGCAAGCA 60 consensus_658#1 ------------------------------------------------------------ consensus_658#0 CCGCTTGGTCGTTGTGTTCCCTCATACGAAGCGATCGAAAATTATCCTTCCGTGATTTTG 120 consensus_658#1 ------------------------------------------------------------ consensus_658#0 GGTGGTGCAGGAAAAGTGAAAGTTTCGCCGTTTAATTTTCATTACGTTTTGTGCTGCTTC 180 consensus_658#1 ------------------------------------------------------------ consensus_658#0 TCTTCCAATTCCACCATCACGTCTAACCTGACGTTTTTTGTGTGGATTGGACACGACTTT 240 consensus_658#1 ------------------------------------------------------------ consensus_658#0 GCTAGATTTAATGTGAATTTTACATTACCTACCCGATGCCTGTCGTGTGATGTGTGAGTT 300 consensus_658#1 ------------------------------------------------------------ consensus_658#0 TGTGTGTGTGATCCGCATTAAAGCTGAATGAATCTTTCGTGCCTTACTGTTGGTTGATAA 360 consensus_658#1 ------------------------------------------------------------ consensus_658#0 TGTCACCAAGGAGCAATTTGTAGCAGAACCCACAAATTGCAAACATATGTCCG-GTTTTC 419 consensus_658#1 ----------------------------------------------CCGCCCACGCGTCC 14 * ** * * * consensus_658#0 TGAGTTGTGCAACGATTAATTATTGCTGGAGCCTAGAATTGCTTGTGTGTGAATGTGCGA 479 consensus_658#1 GGAGTTGTGCAACGATTAATTATTGCTGGAGCCTAGAATTGCTTGTGTGTGAATGTGCGA 74 *********************************************************** consensus_658#0 AGCGCTTCTGGTGCTAGTAAAAACGCAAAGTTTGTCCGCTTCGCAATAAAGTGTCTTAAA 539 consensus_658#1 AGCGCTTCTGGTGCTAGTAAAAACGCAAAGTTTGTCCGCTTCGCAATAAAGTGTCTTAAA 134 ************************************************************ consensus_658#0 TAACACTAGGGAAAACTCATCACCGTTGCGATAGTACGATAACAAATTGCAACCATTGAT 599 consensus_658#1 TAACACTAGGGAAAACTCATCACC------------------------------------ 158 ************************ consensus_658#0 AATCGCGTGCAGCGGTGTAAGGCTGGTGCGAAGAAGAAAAGAATCAACTTCTTCAAGT 657 consensus_658#1 ---------------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||