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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6607#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1402 fasta sequence
[CATGCTACAATCCCGCAATGGCAAGCATACCGGGAGATAATTCGAATATTTGCCGATTTTGTTTGTGCCAGGAGGAGAAGCAACTGATGCTCATTTCAAGAACGTTGCACCCTTCCCTAACAATCGAGGATGTACGAAGGTTCACTGGCATTCAGAAACTCCCCGACGACGCAAACGGGCTCGCGATATGTTTCGAATGTTTGGGTAGTCTTAAGAAATCTGCCGACTTCCGGTACGCCTGCATACGCAATGATTCCACCTTCCGTCAGCTGAGCGCGGAAGCAGCTGCTTGTAGGAAAGGGAATCCGACGAAACCCGTCGACCACAGTGAACACATAGTCTCTGCGGATCCTCTGGAGTTAAAATTTGAGATTATTTACCACGAAGAAGATAGTTTGGAACCGGTCGATGAGGACCAACTCGTACGCAGCATTGTCAATGAAAGTTTCTGTGCCGATGGCGCAACACAAGGGGCAGCCGAGGAGGCGTATTCAGCGAACCACATCGAACTAGGTGAACCGATGTCAGACGCTAACGAGGAGAACGATGCGTTTGAATCACATAGGATAATGAATTACCGTGCTGGGACGGATTCGCTTAATACTAGGCGAACTAGAAAACCCCGGAAACGAAAGCCACCGAACGGTGAACCGGAGGATTTGCCATCTTCATCTGTCGAAGGAAAGGTTCGCAAAAAGTACGACCGTCGGAAAGTGCTGTGCCATTTATGTGGCAAAACGGTAGCCGATATTTCGGTTCACCTTGTAAGTCATAAACAAGAAGCAAATCACCAGTGTCCTCACTGCCCAACTAAAATGACACACCCCAGCAACTTGCT-GCGTCACGTCGAGTCTGTGCACATGAAAAAGATAATAAAAACCTGTGCATTGTGCGGCGAAGGGTTTAAACACATGAGTGTCTATACGGGGCACATGCTCACGAAACACAACATCGGAAAAACGTACAAATGCGAATTGTGCTCGCAAGTGTTCAAGTATCCTGGCNACTTGAGAGAGCATAGGAAAAGAAAACATTCCACTGGCAGCGAATGTGTGTGTCCTATTTGTGGCATGATGTTTAACGACCGGGGTGTATTAAAAAGACACGCAGCGGTACACTCAACGGACACACCGTACCATTGCAAGCACTGCCCCAAACAGTTCAAAAGCGGTGAAGCTAAAAAAGCGCATGAGCTGACACACAGTGGCGTCAAATTTGACTGCAAGTTCTGCAATAAGTCCTATCGGTACAGAACGCAGCTCTGTACACACGTTACACGAACTCACCGGATTAAAGTGGAGGAAAATGCGTCGGGCAGTGACTGAGTGCTTAAAGGAATAGCTCTAGGGTGGTGTATGCTGTACGATGCATTTATGAATATTGGTACAACGCACTACATTAA]
[+] EMBL CNS08L1J [CATGCTACAATCCCGCAATGGCAAGCATACCGGGAGATAATTCGAATATTTGCCGATTTTGTTTGTGCCAGGAGGAGAAGCAACTGATGCTCATTTCAAGAACGTTGCACCCTTCCCTAACAATCGAGGATGTACGAAGGTTCACTGGCATTCAGAAACTCCCCGACGACGCAAACGGGCTCGCGATATGTTTCGAATGTTTGGGTAGTCTTAAGAAATCTGCCGACTTCCGGTACGCCTGCATACGCAATGATTCCACCTTCCGTCAGCTGAGCGCGGAAGCAGCTGCTTGTAGGAAAGGGAATCCGACGAAACCCGTCGACCACAGTGAACACATAGTCTCTGCGGATCCTCTGGAGTTAAAATTTGAGATTATTTACCACGAAGAAGATAGTTTGGAACCGGTCGATGAGGACCAACTCGTACGCAGCATTGTCAATGAAAGTTTCTGTGCCGATGGCGCAACACAAGGGGCAGCCGAGGAGGCGTATTCAGCGAACCACATCGAACTAGGTGAACCGATGTCAGACGCTAACGAGGAGAACGATGCGTTTGAATCACATAGGATAATGAATTACCGTGCTGGGACGGATTCGCTTAATACTAGGCGAACTAGAAAACCCCGGAAACGAAAGCCACCGAACGGTGAACCGGAGGATTTGCCATCTTCATCTGTCGAAGGAAAGGTTCGCAAAAAGTACGACCGTCGGAAAGTGCTGTGCCATTTATGTGGCAAAACGGTAGCCGATATTTCGGTTCACCTTGTAAGTCATAAACAAGAAGCAAATCACCAGTGTCCTCACTGCCCAACTAAAATGACACACCCCAGCAACTTGCT GCGTCACGTCGAGTCTGTGCACATGAAAAAGATAATAAAAACCTGTGCATTGTGCGGCGAAGGGTTTAAACACATGAGTGTCTATACGGGGCACATGCTCACGAAACACAACATCGGAAAAACGTACAAATGCGAATTGTGCTCGCAAGTCTTC ]
[+] EMBL BX621408 [ TACGCCTGCATACGCAATGATTCCACCTTCCGTCAGCTGAGCGCGGAAGCAGCTGCTTGTAGGAAAGGGAATCCGACGAAACCCGTGGACCACAGTGAACACATAGTCTCTGCGGATCCTCTGGAGTTAAAATTTGAGATTATTTACCACGAAGAAGATAGTTTGGAACCGGTCGATGAGGACCAACTCGTACGCAGCATTGCCAATGAAGGTTTCTGTACCGATGGCGCAACACAAGGGGCAGTCGAGGAGGCGTATTCAGCGAACCACATTGAACTAGGTGAACCGATGTCAGACGCTAACGAGGAGAACGATGCGTTTGAATCACATAGGATAATGAATTACTGTGCTGGGACGGATTCGGTTAGTACTAGGCGAACTAGAAAACCCCGGAAACGAAATCCACCGAACGGTGAACCGGAGGATTTGCCATCTTCATCTGTCGAAGGAAAGGTTCGCAAAAAGTACGACCGTCGGAAAGTGCTGTGCCATTTATGTGGCAAAACGGTAGCCGATATTTCGGTTCACCTTGTAAGTCATAAACAAGAAGCAAATCACCAGTGTCCTCACTGCCCAACTAAAATGACACACCCCAGCAACTTGCT GCGTCACGTCGAGTCCGTGCACATGAAAAAGATAATAAAAACCTGTGCATTGTGCGGCGAAGGGTTTAAACACATGAGTGTCTATACGGGGCACATGCTCACGAAACACAACATCGGAAAAACGTACNAATGCGAATTGTGCTCGCNAGTGTTCAAGTATCCTGGCNACTTG ]
[-] EMBL CNS08L1K [ AAAGTTTCTGTGCCGATGGCGCAACACAAGGGGCAGCCGAGGAGGCGTATTCAGCGAACCACATCGAACTAGGTGAACCGATGTCAGACGCTAACGAGGAGAACGATGCGTTTGAATCACATAGGATAATGAATTACCGTGCTGGGACGGATTCGCTTAATACTAGGCGAACTAGAAAACCCCGGAAACGAAAGCCACCGAACGGTGAACCGGAGGATTTGCCATCTTCATCTGTCGAAGGAAAGGTTCGCAAAAAGTACGACCGTCGGAAAGTGCTGTGCCATTTTTGTGGCAAAACGGTAGCCGATATTTCGGTTCACCTTGTAAGTCATAAACAAGAAGCAAATCACCAGTGTCCTCACTGCCCAACTAAAATGACACACCCCAGCAACTTGCTCGCGTCACGTCGAGTCTGTGCACATGAAAAAGATAATAAAAACCTGTGCATTGTGCGGCGAAGGGTTTAAACACATGAGTGTCTATACGGGGCACATGCTCACGAAACACAACATCGGAAAAACGTACAAATGCGAATTGTGCTCGCAAGTGTTCAAGTATCCTGGCAACTTGAGAGAGCATAGGAAAAGAAAACATTCCACTGGCAGCGAATGTGTGTGTCCTATTTGTGGCATGATGTTTAACGACCGGGGTGTATTAAAAAGACACGCAGCGGTACACTCAACGGACACACCGTACCATTGCAAGCACTGCCCCAAACAGTTCAAAAGCGGTGAAGCTAAAAAAGCGCATGAGCTGACACACAGTGGCGTCAAATTTGACTGCAAGTTCTGCAATAAGTCCTATCGGTACAGAACGCAGCTCTGTACACACGTTACACGAACTCACCGGATTAAAGTGGAGGAAAATGCGTCGGGCAGTGACTGAGTGCTTAAAGGAATAGCTCTAGGGTGGTGTATGCTGTACGATGCATTTATGAATATTGGTACAACGCACTACATTAA]
consensusID : consensus_6607#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 746 fasta sequence
[NCGGCACGAGGCCCGCTATGGCAAGCATACCGGGAGATAATTCGAATATTTGCCGATTTTGTTTGTGCCAGGAGGAGAAGCAACTGATGCTCATTTCAAGAACGTTGCACCCTTCCCTAACAATCGAGGATGTACGAAGGTTCACTGGCATTCAGAAACTCCCCGACGACGCAAACGGGCTCGCG--ATGTTTCGAGTGTTTGGGTAGTCTTAAAAAATCTGCCGACTTCCGGTACGCCTGCATACGCAACGATTCCACCTTCCGTCAGCTGAGCGCGGAAGCAGCTGCTTGTAGGAAAGGGAACCCGACGAAACCCGTGGACCACAGTGAACACATAGTCTCTGCGGATCCTCTGGAGTTAAAATTTGAGATTATTTACCACGAAGAAGATAGTTTGGAACCGGTCGATGAGGATCAACTCGTACGCAGCATTGCCAATGAAGGTGTCTGTACCGATGGCGCAACACAAGGGGCAGTCGAGGAGACGTATTCAGCGAACTACATCGAACTAGGTGAACCGACGTCAGACGCTAACGAGGAGAACGATGCGTTTGAATCACATANGATAATGA---ACCGTGCTGGGACGGATTCGCTTAGTACTANGCGAACTAGAAAACCCCGGNAACGAAAGCCACCGAACGGTGAACCGGAGGATTTGCCATCTTCATCTGTCGAATACGACCGTCGGAAAGTGCTGTGCCATTTATGTGGCAAAACGGTAGCCGATATTTTCGGTCACCTTTGTAG]
[+] EMBL BX619577 [NCGGCACGAGGCCCGCTATGGCAAGCATACCGGGAGATAATTCGAATATTTGCCGATTTTGTTTGTGCCAGGAGGAGAAGCAACTGATGCTCATTTCAAGAACGTTGCACCCTTCCCTAACAATCGAGGATGTACGAAGGTTCACTGGCATTCAGAAACTCCCCGACGACGCAAACGGGCTCGCG ATGTTTCGAGTGTTTGGGTAGTCTTAAAAAATCTGCCGACTTCCGGTACGCCTGCATACGCAACGATTCCACCTTCCGTCAGCTGAGCGCGGAAGCAGCTGCTTGTAGGAAAGGGAACCCGACGAAACCCGTGGACCACAGTGAACACATAGTCTCTGCGGATCCTCTGGAGTTAAAATTTGAGATTATTTACCACGAAGAAGATAGTTTGGAACCGGTCGATGAGGATCAACTCGTACGCAGCATTGCCAATGAAGGTGTCTGTACCGATGGCGCAACACAAGGGGCAGTCGAGGAGACGTATTCAGCGAACTACATCGAACTAGGTGAACCGACGTCAGACGCTAACGAGGAGAACGATGCGTTTGAATCACATANGATAATGA ACCGTGCTGGGACGGATTCGCTTAGTACTANGCGAACTAGAAAACCCCGGNAA ]
[+] EMBL BX606534 [ CCGGGAGATAATTCGAATATTTGCCGATTTTGTTTGTGCCAGGAGGAGAAGCAACTGATGCTCATTTCAAGAACGTTGCACCCTTCCCTAACAATCGAGGATGTACGAAGGTTCACTGGCATTCAGAAACTCCCCGACGACGCAAACGGGCTCGCGATATGTTTCGAATGTTTGGGTAGTCTTAAGAAATCTGCCGACTTCCGGTACGCCTGCATACGCAATGATTCCACCTTCCGTCAGCTGAGCGCGGAAGCAGCTGCTTGTAGGAAAGGGAATCCGACGAAACCCGTCGACCACAGTGAACACATAGTCTCTGCGGATCCTCTGGAGTTAAAATTTGAGATTATTTACCACGAAGAAGATAGTTTGGAACCGGTCGATGAGGACCAACTCGTACGCAGCATTGTCAATGAAAGTTTCTGTGCCGATGGCGCAACACAAGGGGCAGCCGAGGAGGCGTATTCAGCGAACCACATCGAACTAGGTGAACCGATGTCAGACGCTAACGAGGAGAACGATGCGTTTGAATCACATAGGATAATGAATTACCGTGCTGGGACGGATTCGCTTAATACTAGGCGAACTAGAAAACCCCGGAAACGAAAGCCACCGAACGGTGAACCGGAGGATTTGCCATCTTCATCTGTCGAATACGACCGTCGGAAAGTGCTGTGCCATTTATGTGGCAAAACGGTAGCCGATATTTTCGGTCACCTTTGTAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6607#0 CATGCTACAAT-CCCGCAATGGCAAGCATACCGGGAGATAATTCGAATATTTGCCGATTT 59
consensus_6607#1 -NCGGCACGAGGCCCGCTATGGCAAGCATACCGGGAGATAATTCGAATATTTGCCGATTT 59
* ** * ***** ******************************************
consensus_6607#0 TGTTTGTGCCAGGAGGAGAAGCAACTGATGCTCATTTCAAGAACGTTGCACCCTTCCCTA 119
consensus_6607#1 TGTTTGTGCCAGGAGGAGAAGCAACTGATGCTCATTTCAAGAACGTTGCACCCTTCCCTA 119
************************************************************
consensus_6607#0 ACAATCGAGGATGTACGAAGGTTCACTGGCATTCAGAAACTCCCCGACGACGCAAACGGG 179
consensus_6607#1 ACAATCGAGGATGTACGAAGGTTCACTGGCATTCAGAAACTCCCCGACGACGCAAACGGG 179
************************************************************
consensus_6607#0 CTCGCGATATGTTTCGAATGTTTGGGTAGTCTTAAGAAATCTGCCGACTTCCGGTACGCC 239
consensus_6607#1 CTCGCGAT--GTTTCGAGTGTTTGGGTAGTCTTAAAAAATCTGCCGACTTCCGGTACGCC 237
******** ******* ***************** ************************
consensus_6607#0 TGCATACGCAATGATTCCACCTTCCGTCAGCTGAGCGCGGAAGCAGCTGCTTGTAGGAAA 299
consensus_6607#1 TGCATACGCAACGATTCCACCTTCCGTCAGCTGAGCGCGGAAGCAGCTGCTTGTAGGAAA 297
*********** ************************************************
consensus_6607#0 GGGAATCCGACGAAACCCGTCGACCACAGTGAACACATAGTCTCTGCGGATCCTCTGGAG 359
consensus_6607#1 GGGAACCCGACGAAACCCGTGGACCACAGTGAACACATAGTCTCTGCGGATCCTCTGGAG 357
***** ************** ***************************************
consensus_6607#0 TTAAAATTTGAGATTATTTACCACGAAGAAGATAGTTTGGAACCGGTCGATGAGGACCAA 419
consensus_6607#1 TTAAAATTTGAGATTATTTACCACGAAGAAGATAGTTTGGAACCGGTCGATGAGGATCAA 417
******************************************************** ***
consensus_6607#0 CTCGTACGCAGCATTGTCAATGAAAGTTTCTGTGCCGATGGCGCAACACAAGGGGCAGCC 479
consensus_6607#1 CTCGTACGCAGCATTGCCAATGAAGGTGTCTGTACCGATGGCGCAACACAAGGGGCAGTC 477
**************** ******* ** ***** ************************ *
consensus_6607#0 GAGGAGGCGTATTCAGCGAACCACATCGAACTAGGTGAACCGATGTCAGACGCTAACGAG 539
consensus_6607#1 GAGGAGACGTATTCAGCGAACTACATCGAACTAGGTGAACCGACGTCAGACGCTAACGAG 537
****** ************** ********************* ****************
consensus_6607#0 GAGAACGATGCGTTTGAATCACATAGGATAATGAATTACCGTGCTGGGACGGATTCGCTT 599
consensus_6607#1 GAGAACGATGCGTTTGAATCACATANGATAATGAA---CCGTGCTGGGACGGATTCGCTT 594
************************* ********* **********************
consensus_6607#0 AATACTAGGCGAACTAGAAAACCCCGGAAACGAAAGCCACCGAACGGTGAACCGGAGGAT 659
consensus_6607#1 AGTACTANGCGAACTAGAAAACCCCGGNAACGAAAGCCACCGAACGGTGAACCGGAGGAT 654
* ***** ******************* ********************************
consensus_6607#0 TTGCCATCTTCATCTGTCGAAGGAAAGGTTCGCAAAAAGTACGACCGTCGGAAAGTGCTG 719
consensus_6607#1 TTGCCATCTTCATCTGTCGAA------------------TACGACCGTCGGAAAGTGCTG 696
********************* *********************
consensus_6607#0 TGCCATTTATGTGGCAAAACGGTAGCCGATATTTCGGTTCACCTTGTAAGTCATAAACAA 779
consensus_6607#1 TGCCATTTATGTGGCAAAACGGTAGCCGATATTTTCGGTCACCTTTGTAG---------- 746
********************************** * ******* **
consensus_6607#0 GAAGCAAATCACCAGTGTCCTCACTGCCCAACTAAAATGACACACCCCAGCAACTTGCTG 839
consensus_6607#1 ------------------------------------------------------------
consensus_6607#0 CGTCACGTCGAGTCTGTGCACATGAAAAAGATAATAAAAACCTGTGCATTGTGCGGCGAA 899
consensus_6607#1 ------------------------------------------------------------
consensus_6607#0 GGGTTTAAACACATGAGTGTCTATACGGGGCACATGCTCACGAAACACAACATCGGAAAA 959
consensus_6607#1 ------------------------------------------------------------
consensus_6607#0 ACGTACAAATGCGAATTGTGCTCGCAAGTGTTCAAGTATCCTGGCNACTTGAGAGAGCAT 1019
consensus_6607#1 ------------------------------------------------------------
consensus_6607#0 AGGAAAAGAAAACATTCCACTGGCAGCGAATGTGTGTGTCCTATTTGTGGCATGATGTTT 1079
consensus_6607#1 ------------------------------------------------------------
consensus_6607#0 AACGACCGGGGTGTATTAAAAAGACACGCAGCGGTACACTCAACGGACACACCGTACCAT 1139
consensus_6607#1 ------------------------------------------------------------
consensus_6607#0 TGCAAGCACTGCCCCAAACAGTTCAAAAGCGGTGAAGCTAAAAAAGCGCATGAGCTGACA 1199
consensus_6607#1 ------------------------------------------------------------
consensus_6607#0 CACAGTGGCGTCAAATTTGACTGCAAGTTCTGCAATAAGTCCTATCGGTACAGAACGCAG 1259
consensus_6607#1 ------------------------------------------------------------
consensus_6607#0 CTCTGTACACACGTTACACGAACTCACCGGATTAAAGTGGAGGAAAATGCGTCGGGCAGT 1319
consensus_6607#1 ------------------------------------------------------------
consensus_6607#0 GACTGAGTGCTTAAAGGAATAGCTCTAGGGTGGTGTATGCTGTACGATGCATTTATGAAT 1379
consensus_6607#1 ------------------------------------------------------------
consensus_6607#0 ATTGGTACAACGCACTACATTAA 1402
consensus_6607#1 -----------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||