These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_670#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 411 fasta sequence [CCGGAGTGTGTGTGTGTGTGAAAGTGAAAGTTACAAAATTATAACAAAAAAAACGACAAAAGCTACTATCAAAAAATAGTTTTGCGAAGAGAACATTTTTTGCAGCAGCAGCAGCAGGGTGACGACGACCGTGAAGGCGGGGGCTTTTTCCCCCTCACCCACAATCAACCAAACGCTTGAAGAAGAAGAAGAATAAAATTTGAATAAAAAACGCCAACAAAAAGCCATATCCAACTCAAACTGCCGAGTTGTGCCGTGGGAGGGGACATCATGCTGTCGGCGGTGGAAAACCTGGGCCCGTCCGGGCCGGGCCGTGTCCCACCGTACCCGCGGCACCATCCGCAAAACCACCACCAGCTGCCGCACCCGGGGCAGCAGCATCTGCCGTACCATCAACATGAACATTGATAG] [+] EMBL BM619948 [CCGGAGTGTGTGTGTGTGTGAAAGTGAAAGTTACAAAATTATAACAAAAAAAACGACAAAAGCTACTATCAAAAAATAGTTTTGCGAAGAGAACATTTTTTGCAGCAGCAGCAGCAGGGTGACGACGACCGTGAAGGCGGGGGCTTTTTCCCCCTCACCCACAATCAACCAAACGCTTGAAGAAGAAGAAGAATAAAATTTGAATAAAAAACGCCAACAAAAAGCCATATCCAACTCAAACTGCCGAGTTGTGCCGTGGGAGGGGACATCATGCTGTCGGCGGTGGAAAACCTGGGCCCGTCCGGGCCGGGCCGTGTCCCACCGTACCCGCGGCACCATCCGCAAAACCACCACCAGCTGCCGCACCCGGGGCAGCAGCATCTGCCGTACCATCAACATGAACATTGATAG] consensusID : consensus_670#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 245 fasta sequence [NCTTGAAGAAGAAGAAGAATAAAATTAAAGAAAAAAACGCCAACAAAAAGCCATCTCCAACTCAAACTGCCGAGTTGTGCCGTGGGAGGGGACATCATGCTGTCGGCGGTGGAAAACCTGGGCCCGTCCGGGCCGGGCCGTGTCCCACCGTACCCGCGGCACCATCCGCAAAACCACCACCAGCTGCCGCACCCGGGGCAGCAGCATCTGGCCGTACCATCCGCTGCACTCGCTGCTGTCGCCGA] [+] EMBL BX627158 [NCTTGAAGAAGAAGAAGAATAAAATTAAAGAAAAAAACGCCAACAAAAAGCCATCTCCAACTCAAACTGCCGAGTTGTGCCGTGGGAGGGGACATCATGCTGTCGGCGGTGGAAAACCTGGGCCCGTCCGGGCCGGGCCGTGTCCCACCGTACCCGCGGCACCATCCGCAAAACCACCACCAGCTGCCGCACCCGGGGCAGCAGCATCTGGCCGTACCATCCGCTGCACTCGCTGCTGTCGCCGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_670#0 CCGGAGTGTGTGTGTGTGTGAAAGTGAAAGTTACAAAATTATAACAAAAAAAACGACAAA 60 consensus_670#1 ------------------------------------------------------------ consensus_670#0 AGCTACTATCAAAAAATAGTTTTGCGAAGAGAACATTTTTTGCAGCAGCAGCAGCAGGGT 120 consensus_670#1 ------------------------------------------------------------ consensus_670#0 GACGACGACCGTGAAGGCGGGGGCTTTTTCCCCCTCACCCACAATCAACCAAACGCTTGA 180 consensus_670#1 ------------------------------------------------------NCTTGA 6 ***** consensus_670#0 AGAAGAAGAAGAATAAAATTTGAATAAAAAACGCCAACAAAAAGCCATATCCAACTCAAA 240 consensus_670#1 AGAAGAAGAAGAATAAAATTAAAGAAAAAAACGCCAACAAAAAGCCATCTCCAACTCAAA 66 ******************** * *********************** *********** consensus_670#0 CTGCCGAGTTGTGCCGTGGGAGGGGACATCATGCTGTCGGCGGTGGAAAACCTGGGCCCG 300 consensus_670#1 CTGCCGAGTTGTGCCGTGGGAGGGGACATCATGCTGTCGGCGGTGGAAAACCTGGGCCCG 126 ************************************************************ consensus_670#0 TCCGGGCCGGGCCGTGTCCCACCGTACCCGCGGCACCATCCGCAAAACCACCACCAGCTG 360 consensus_670#1 TCCGGGCCGGGCCGTGTCCCACCGTACCCGCGGCACCATCCGCAAAACCACCACCAGCTG 186 ************************************************************ consensus_670#0 CCGCACCCGGGGCAGCAGCATCTG-CCGTACCATCAAC-ATGAACATTGATAG------ 411 consensus_670#1 CCGCACCCGGGGCAGCAGCATCTGGCCGTACCATCCGCTGCACTCGCTGCTGTCGCCGA 245 ************************ ********** * * ** * |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||