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Anopheles gambiae
cluster # 6711 cluster # 6711       Sequences # 6       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6711#0 length = 891 sequences # 1  
consensus_6711#1 length = 872 sequences # 1  
consensus_6711#2 length = 717 sequences # 1  
consensus_6711#3 length = 632 sequences # 1  
consensus_6711#4 length = 529 sequences # 1  
consensus_6711#5 length = 484 sequences # 1  

consensusID : consensus_6711#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 891
fasta sequence
                              [AGGCAAGAATCGCGCACGAGGGTGGTGTAGATTTGCTTATCACCTCCCTATTCTCAGGTTGCGCTCCTCCATTGCCTGGACTACCACTGCCTTCACACTTCAGAATACGCGCAGTTGCGAAGGATGGGGAACGAATTGGGCTCACACTGTACTGGAATTGCTACGTCTGTAGGAAAAGGGATTGCTCCAGCTCATTCCAATCGGTTCATTATGACATCCAATACCCGGGCCCCTCATCATAAAATTGTATCTCCTCATCATAGAATTGTGCAACGCGCCGAAGACATCTCCTGGCTCGCGCTTAGGCGTACCTGCGCACGGGAATGATATGGAAGCTGTTTCCAGTTTTGCAAGTTACTAGCGACCGTTTTCAAAGATGCCTATCGTCTTCGTACCATTGCGTCCAGACGATTGGTCAGTTTCATCCAGCTGCACTACTACCCCAACTGGGCCACTGGTTGGCAATAAGTGGCTGTGGATTAAAGTATCTGATGGCGGAGAATGGAGTTGGTCTACAACCGCGCGAGTGTGTCTACTGCATTCTTCTAAGGCGTGTGGTCGCTGCGTGATGGCGGGTTTTGGAGGACGTCAGCGATGGTGCAACCTGCCCATCGCTTCGTTGCAGCTTGCTGTCTGGCCAAGTTTTTCTCTTCGACTCATTTGGTGGTCTCCTCGGGAAGACGGGCATCAGACCATGCAATAGAAGCTACGACGTTGTATAGGAAGAACGGTGCTNCACGGCTGTTCCCAAGTTGGGAAGAAAGCCTGGTTGGAAGACCTAAACTCGAGCGAAGCGGCCCANGTTATGGTGTCTACTTCATCACTTCCTGGCNACGTTACGGANTGTGGGTANGTTCGCCCGAAGGGGAATGTTCGGCCGAANNTTGCCAG]

[+] EMBL BX467669             [AGGCAAGAATCGCGCACGAGGGTGGTGTAGATTTGCTTATCACCTCCCTATTCTCAGGTTGCGCTCCTCCATTGCCTGGACTACCACTGCCTTCACACTTCAGAATACGCGCAGTTGCGAAGGATGGGGAACGAATTGGGCTCACACTGTACTGGAATTGCTACGTCTGTAGGAAAAGGGATTGCTCCAGCTCATTCCAATCGGTTCATTATGACATCCAATACCCGGGCCCCTCATCATAAAATTGTATCTCCTCATCATAGAATTGTGCAACGCGCCGAAGACATCTCCTGGCTCGCGCTTAGGCGTACCTGCGCACGGGAATGATATGGAAGCTGTTTCCAGTTTTGCAAGTTACTAGCGACCGTTTTCAAAGATGCCTATCGTCTTCGTACCATTGCGTCCAGACGATTGGTCAGTTTCATCCAGCTGCACTACTACCCCAACTGGGCCACTGGTTGGCAATAAGTGGCTGTGGATTAAAGTATCTGATGGCGGAGAATGGAGTTGGTCTACAACCGCGCGAGTGTGTCTACTGCATTCTTCTAAGGCGTGTGGTCGCTGCGTGATGGCGGGTTTTGGAGGACGTCAGCGATGGTGCAACCTGCCCATCGCTTCGTTGCAGCTTGCTGTCTGGCCAAGTTTTTCTCTTCGACTCATTTGGTGGTCTCCTCGGGAAGACGGGCATCAGACCATGCAATAGAAGCTACGACGTTGTATAGGAAGAACGGTGCTNCACGGCTGTTCCCAAGTTGGGAAGAAAGCCTGGTTGGAAGACCTAAACTCGAGCGAAGCGGCCCANGTTATGGTGTCTACTTCATCACTTCCTGGCNACGTTACGGANTGTGGGTANGTTCGCCCGAAGGGGAATGTTCGGCCGAANNTTGCCAG]


>consensus_6711#0 AGGCAAGAATCGCGCACGAGGGTGGTGTAGATTTGCTTATCACCTCCCTATTCTCAGGTT GCGCTCCTCCATTGCCTGGACTACCACTGCCTTCACACTTCAGAATACGCGCAGTTGCGA AGGATGGGGAACGAATTGGGCTCACACTGTACTGGAATTGCTACGTCTGTAGGAAAAGGG ATTGCTCCAGCTCATTCCAATCGGTTCATTATGACATCCAATACCCGGGCCCCTCATCAT AAAATTGTATCTCCTCATCATAGAATTGTGCAACGCGCCGAAGACATCTCCTGGCTCGCG CTTAGGCGTACCTGCGCACGGGAATGATATGGAAGCTGTTTCCAGTTTTGCAAGTTACTA GCGACCGTTTTCAAAGATGCCTATCGTCTTCGTACCATTGCGTCCAGACGATTGGTCAGT TTCATCCAGCTGCACTACTACCCCAACTGGGCCACTGGTTGGCAATAAGTGGCTGTGGAT TAAAGTATCTGATGGCGGAGAATGGAGTTGGTCTACAACCGCGCGAGTGTGTCTACTGCA TTCTTCTAAGGCGTGTGGTCGCTGCGTGATGGCGGGTTTTGGAGGACGTCAGCGATGGTG CAACCTGCCCATCGCTTCGTTGCAGCTTGCTGTCTGGCCAAGTTTTTCTCTTCGACTCAT TTGGTGGTCTCCTCGGGAAGACGGGCATCAGACCATGCAATAGAAGCTACGACGTTGTAT AGGAAGAACGGTGCTNCACGGCTGTTCCCAAGTTGGGAAGAAAGCCTGGTTGGAAGACCT AAACTCGAGCGAAGCGGCCCANGTTATGGTGTCTACTTCATCACTTCCTGGCNACGTTAC GGANTGTGGGTANGTTCGCCCGAAGGGGAATGTTCGGCCGAANNTTGCCAG



consensusID : consensus_6711#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 872
fasta sequence
                              [AGTTATCACGGAAGATTCGATTCTTAAGTGGTACAAGGAGGGCCATTCGAACAAGGGAAAGATGCACTTCCTTGAACAGATGAAAAAATTCATTGAGTGGCTACAAAATGCCGAAGAAGGTAATGTGCTTGTTATGCTGCTTTTGTTTGCGGTTTCGATTGTCTCATTTAGACAATCGTCCGGTTAGTTGCATCATGGCAAACACGGACTGCATTGGTTCCAAGGTGTGCAGCGTTCGTTCTTGAATTGATGCGATAGTAAAGTTGCCGCGAGTTCTACTTATCTTTTTTTCTATCTCGAAATAGAAAGACGAGAGCTTAAGCAATACAGATTATTAGTGTTCCACATTTTGATATAAATTTAGCCCACTCAAGAGGAATGTATCATTCAAATACTAATGATGTGTTTCTATTTCTATCTCCTTACTATTTTACAGAAAGCGAATCTGAGGAAGACTAAATCTACACTGTCACGGTGGCGCTCATCTCGTTTTTGTCGTCTTTTTTTGGATACGTTTTTCATCCCTACCCACCACGCACCGTTTTTACCTACAATAGCGCGCAACCCATCACCACCACCACCACCACCAGTCACGATCACATCGCCTGGCGTTCTTCTTTGCAATAAACTAAACGAGTGTTCCGCGCGCGCGCGCACCAATTCAAACAACATCCTTTATCCCATCGTCCCCCCCGGCGGAACGCAGCAAAAGCACAACAATACGTATTCTCATTTTTATCCCCGTTATTATTATTTTTTTTTTATTAGAACAATGAAAGCACCCCGTGGTGCTGAATAGAACGAACAGCGGCTGCTGCTAACCCCTTCCGCTTCTCTCCATGCTCTATCTCCCGTGGGCATGGGAGGGGAGG]

[+] EMBL BX613068             [AGTTATCACGGAAGATTCGATTCTTAAGTGGTACAAGGAGGGCCATTCGAACAAGGGAAAGATGCACTTCCTTGAACAGATGAAAAAATTCATTGAGTGGCTACAAAATGCCGAAGAAGGTAATGTGCTTGTTATGCTGCTTTTGTTTGCGGTTTCGATTGTCTCATTTAGACAATCGTCCGGTTAGTTGCATCATGGCAAACACGGACTGCATTGGTTCCAAGGTGTGCAGCGTTCGTTCTTGAATTGATGCGATAGTAAAGTTGCCGCGAGTTCTACTTATCTTTTTTTCTATCTCGAAATAGAAAGACGAGAGCTTAAGCAATACAGATTATTAGTGTTCCACATTTTGATATAAATTTAGCCCACTCAAGAGGAATGTATCATTCAAATACTAATGATGTGTTTCTATTTCTATCTCCTTACTATTTTACAGAAAGCGAATCTGAGGAAGACTAAATCTACACTGTCACGGTGGCGCTCATCTCGTTTTTGTCGTCTTTTTTTGGATACGTTTTTCATCCCTACCCACCACGCACCGTTTTTACCTACAATAGCGCGCAACCCATCACCACCACCACCACCACCAGTCACGATCACATCGCCTGGCGTTCTTCTTTGCAATAAACTAAACGAGTGTTCCGCGCGCGCGCGCACCAATTCAAACAACATCCTTTATCCCATCGTCCCCCCCGGCGGAACGCAGCAAAAGCACAACAATACGTATTCTCATTTTTATCCCCGTTATTATTATTTTTTTTTTATTAGAACAATGAAAGCACCCCGTGGTGCTGAATAGAACGAACAGCGGCTGCTGCTAACCCCTTCCGCTTCTCTCCATGCTCTATCTCCCGTGGGCATGGGAGGGGAGG]


>consensus_6711#1 AGTTATCACGGAAGATTCGATTCTTAAGTGGTACAAGGAGGGCCATTCGAACAAGGGAAA GATGCACTTCCTTGAACAGATGAAAAAATTCATTGAGTGGCTACAAAATGCCGAAGAAGG TAATGTGCTTGTTATGCTGCTTTTGTTTGCGGTTTCGATTGTCTCATTTAGACAATCGTC CGGTTAGTTGCATCATGGCAAACACGGACTGCATTGGTTCCAAGGTGTGCAGCGTTCGTT CTTGAATTGATGCGATAGTAAAGTTGCCGCGAGTTCTACTTATCTTTTTTTCTATCTCGA AATAGAAAGACGAGAGCTTAAGCAATACAGATTATTAGTGTTCCACATTTTGATATAAAT TTAGCCCACTCAAGAGGAATGTATCATTCAAATACTAATGATGTGTTTCTATTTCTATCT CCTTACTATTTTACAGAAAGCGAATCTGAGGAAGACTAAATCTACACTGTCACGGTGGCG CTCATCTCGTTTTTGTCGTCTTTTTTTGGATACGTTTTTCATCCCTACCCACCACGCACC GTTTTTACCTACAATAGCGCGCAACCCATCACCACCACCACCACCACCAGTCACGATCAC ATCGCCTGGCGTTCTTCTTTGCAATAAACTAAACGAGTGTTCCGCGCGCGCGCGCACCAA TTCAAACAACATCCTTTATCCCATCGTCCCCCCCGGCGGAACGCAGCAAAAGCACAACAA TACGTATTCTCATTTTTATCCCCGTTATTATTATTTTTTTTTTATTAGAACAATGAAAGC ACCCCGTGGTGCTGAATAGAACGAACAGCGGCTGCTGCTAACCCCTTCCGCTTCTCTCCA TGCTCTATCTCCCGTGGGCATGGGAGGGGAGG



consensusID : consensus_6711#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 717
fasta sequence
                              [CGACCCACGCGTCCGGTCTCCCACGTCCGTCCTGTGCTGTGCTTCACGTCGGTTTCGTCTTCATATACTCGGCTTTGATACTTTCCCGGTCGGCAACATCTGGCAGCAAGTGAGGTGTTTGCTCGTGTTGCAACACTACGTATGTAGCAGCGGGCCTGGGCGAACGATCACTGTGCCCCCTCCTCCCCCCGGTAAGGACGCAAAAGCTTGACGTGAACGTGCAACGATGCCACTGTTTGGTAAATCGCAGAAAAGTCCACAGGAGCTGGTGAAGTCGCTGAAGGAGGCGGTCAATGCGCTGGAGCGCGGCGATAAGAAGGCGGAAAAGGCACAGGAAGATGTGAGCAAGAACCTGGTGTCGATCAAGAACATGTTGTGCGGTACGGCCGATGCCGAGCCGCAGACCGAGATCGTCATCTCGCAGCTGGCCCACGAGCTGTACAGCACCGATCTGCTGCTGCTGCTGATACAGAACCTGAACCGCATTGACTTCGAGGGCAAGAAGGACGTGGCACACATCTTCAACAATGTGATCAGACGCCAGATCGGCACCCGACTGCCGACGGTCGAGTACATCTGCACCAAGCCGGAGATTCTGTTCACGCTGATGGCCGGGTACGAGCATCAGGAGATCGCGCTCAACTGTGGCATCATGTTGCGCGAGTGCGCCCGGCACGAGGCGCTCGCAAAGATCATGCTCCACTCGGAGGAGTTTTT]

[+] EMBL BM574972             [CGACCCACGCGTCCGGTCTCCCACGTCCGTCCTGTGCTGTGCTTCACGTCGGTTTCGTCTTCATATACTCGGCTTTGATACTTTCCCGGTCGGCAACATCTGGCAGCAAGTGAGGTGTTTGCTCGTGTTGCAACACTACGTATGTAGCAGCGGGCCTGGGCGAACGATCACTGTGCCCCCTCCTCCCCCCGGTAAGGACGCAAAAGCTTGACGTGAACGTGCAACGATGCCACTGTTTGGTAAATCGCAGAAAAGTCCACAGGAGCTGGTGAAGTCGCTGAAGGAGGCGGTCAATGCGCTGGAGCGCGGCGATAAGAAGGCGGAAAAGGCACAGGAAGATGTGAGCAAGAACCTGGTGTCGATCAAGAACATGTTGTGCGGTACGGCCGATGCCGAGCCGCAGACCGAGATCGTCATCTCGCAGCTGGCCCACGAGCTGTACAGCACCGATCTGCTGCTGCTGCTGATACAGAACCTGAACCGCATTGACTTCGAGGGCAAGAAGGACGTGGCACACATCTTCAACAATGTGATCAGACGCCAGATCGGCACCCGACTGCCGACGGTCGAGTACATCTGCACCAAGCCGGAGATTCTGTTCACGCTGATGGCCGGGTACGAGCATCAGGAGATCGCGCTCAACTGTGGCATCATGTTGCGCGAGTGCGCCCGGCACGAGGCGCTCGCAAAGATCATGCTCCACTCGGAGGAGTTTTT]


>consensus_6711#2 CGACCCACGCGTCCGGTCTCCCACGTCCGTCCTGTGCTGTGCTTCACGTCGGTTTCGTCT TCATATACTCGGCTTTGATACTTTCCCGGTCGGCAACATCTGGCAGCAAGTGAGGTGTTT GCTCGTGTTGCAACACTACGTATGTAGCAGCGGGCCTGGGCGAACGATCACTGTGCCCCC TCCTCCCCCCGGTAAGGACGCAAAAGCTTGACGTGAACGTGCAACGATGCCACTGTTTGG TAAATCGCAGAAAAGTCCACAGGAGCTGGTGAAGTCGCTGAAGGAGGCGGTCAATGCGCT GGAGCGCGGCGATAAGAAGGCGGAAAAGGCACAGGAAGATGTGAGCAAGAACCTGGTGTC GATCAAGAACATGTTGTGCGGTACGGCCGATGCCGAGCCGCAGACCGAGATCGTCATCTC GCAGCTGGCCCACGAGCTGTACAGCACCGATCTGCTGCTGCTGCTGATACAGAACCTGAA CCGCATTGACTTCGAGGGCAAGAAGGACGTGGCACACATCTTCAACAATGTGATCAGACG CCAGATCGGCACCCGACTGCCGACGGTCGAGTACATCTGCACCAAGCCGGAGATTCTGTT CACGCTGATGGCCGGGTACGAGCATCAGGAGATCGCGCTCAACTGTGGCATCATGTTGCG CGAGTGCGCCCGGCACGAGGCGCTCGCAAAGATCATGCTCCACTCGGAGGAGTTTTT



consensusID : consensus_6711#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 632
fasta sequence
                              [CCGCGGACGCGTGGGCGGACGCGTGGGCCGGGGCAGAAGCTAAAAAAATTGCTACGGACCTTAATACAAAGAACCTGGTCTTGAAAGCCCAAGTGCTAGCTGGCGGGCGCGGAAAAGGAAGCTTTAAGAATGGGTTGAAGGGTGGTGTCCGGGTGGTGTTTTCACCCCAGGAGGCAGAAGATATTTCGGGCAAAATGATCAACCAGCTTCTCGTCACTAAACAAACGGGAGCAGCGGGACGTATTTGCAATTCTGTCATGGTGGCGGAACGAAAGTTTCCTCGCCGAGAATTCTACTTTGCCGTTATGATGGAGCGTGCTTTCAATGGACCTGTTCTAATCGCATCGTCTCAAGGAGGTGTCAACATTGAAGAAGTGGCTGCTGAAAACCCAGATGCAATTGTATACGAACCTATTGACATTAACAAAGGTCTGCAGAAGGAGCAAGCAGTTCAGGTCGCCAAGAAGGTGGGACTCAATGACAAAGTGGAGGAGACCGCTAAAATGTTGCTCAATATGTACGATTTGTTTGTCAAGAAGGATGCATTGCTGATTGAGATTAATCCGTATGCGGAAGATGCCGCTGAAACGTATTTTGCCCTTGATGCCAAAATGCGTTTTGACGACAATGCC]

[+] EMBL BM587728             [CCGCGGACGCGTGGGCGGACGCGTGGGCCGGGGCAGAAGCTAAAAAAATTGCTACGGACCTTAATACAAAGAACCTGGTCTTGAAAGCCCAAGTGCTAGCTGGCGGGCGCGGAAAAGGAAGCTTTAAGAATGGGTTGAAGGGTGGTGTCCGGGTGGTGTTTTCACCCCAGGAGGCAGAAGATATTTCGGGCAAAATGATCAACCAGCTTCTCGTCACTAAACAAACGGGAGCAGCGGGACGTATTTGCAATTCTGTCATGGTGGCGGAACGAAAGTTTCCTCGCCGAGAATTCTACTTTGCCGTTATGATGGAGCGTGCTTTCAATGGACCTGTTCTAATCGCATCGTCTCAAGGAGGTGTCAACATTGAAGAAGTGGCTGCTGAAAACCCAGATGCAATTGTATACGAACCTATTGACATTAACAAAGGTCTGCAGAAGGAGCAAGCAGTTCAGGTCGCCAAGAAGGTGGGACTCAATGACAAAGTGGAGGAGACCGCTAAAATGTTGCTCAATATGTACGATTTGTTTGTCAAGAAGGATGCATTGCTGATTGAGATTAATCCGTATGCGGAAGATGCCGCTGAAACGTATTTTGCCCTTGATGCCAAAATGCGTTTTGACGACAATGCC]


>consensus_6711#3 CCGCGGACGCGTGGGCGGACGCGTGGGCCGGGGCAGAAGCTAAAAAAATTGCTACGGACC TTAATACAAAGAACCTGGTCTTGAAAGCCCAAGTGCTAGCTGGCGGGCGCGGAAAAGGAA GCTTTAAGAATGGGTTGAAGGGTGGTGTCCGGGTGGTGTTTTCACCCCAGGAGGCAGAAG ATATTTCGGGCAAAATGATCAACCAGCTTCTCGTCACTAAACAAACGGGAGCAGCGGGAC GTATTTGCAATTCTGTCATGGTGGCGGAACGAAAGTTTCCTCGCCGAGAATTCTACTTTG CCGTTATGATGGAGCGTGCTTTCAATGGACCTGTTCTAATCGCATCGTCTCAAGGAGGTG TCAACATTGAAGAAGTGGCTGCTGAAAACCCAGATGCAATTGTATACGAACCTATTGACA TTAACAAAGGTCTGCAGAAGGAGCAAGCAGTTCAGGTCGCCAAGAAGGTGGGACTCAATG ACAAAGTGGAGGAGACCGCTAAAATGTTGCTCAATATGTACGATTTGTTTGTCAAGAAGG ATGCATTGCTGATTGAGATTAATCCGTATGCGGAAGATGCCGCTGAAACGTATTTTGCCC TTGATGCCAAAATGCGTTTTGACGACAATGCC



consensusID : consensus_6711#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 529
fasta sequence
                              [CCGCGGACGCGTGGGCGGTCGGGCTGTTCATCGATGCCGGGTCCCGGTACGAGGACAAGCACAGCAACGGTACGGCAAACTTCTTCGAACACCTAGCGTTTAAGGGAACGACCAAACGATCACAGTCCGCGCTGGAGCAGGAGGTGGAGAGTATGGGCGCACAGCTGGACGCGAGCACGGGCCGGGACCAGACCTCCTTCACCGCCCGCTGCCTGTCGAAGGACGTCCCGAAGCTGGTCGAAATTCTGGCCGACGTCGTGCAGAACCCCCGGCTGGACGATGCGGACGTGAAGCGCGCCCGCGAGGTTATCCTGGGCGAGATCGAACAGGTGGACGCGGGCAACCTGCGGGAGGTCGTGTTCGACCACCTGCACTCGACCGCGTTCCAGGGCACGTCGCTCAGCAACACCGTGTGGGGCCCGAGCAGCAACATCCGCTCGATCAAGGCGGACGACGTGCGCGGTTACGTCAACTCGCACTACAAGGCGCCGCGCATGGTGCTGGCCGCGGCCGGTGACGTGCGCCAGGC]

[+] EMBL BM593298             [CCGCGGACGCGTGGGCGGTCGGGCTGTTCATCGATGCCGGGTCCCGGTACGAGGACAAGCACAGCAACGGTACGGCAAACTTCTTCGAACACCTAGCGTTTAAGGGAACGACCAAACGATCACAGTCCGCGCTGGAGCAGGAGGTGGAGAGTATGGGCGCACAGCTGGACGCGAGCACGGGCCGGGACCAGACCTCCTTCACCGCCCGCTGCCTGTCGAAGGACGTCCCGAAGCTGGTCGAAATTCTGGCCGACGTCGTGCAGAACCCCCGGCTGGACGATGCGGACGTGAAGCGCGCCCGCGAGGTTATCCTGGGCGAGATCGAACAGGTGGACGCGGGCAACCTGCGGGAGGTCGTGTTCGACCACCTGCACTCGACCGCGTTCCAGGGCACGTCGCTCAGCAACACCGTGTGGGGCCCGAGCAGCAACATCCGCTCGATCAAGGCGGACGACGTGCGCGGTTACGTCAACTCGCACTACAAGGCGCCGCGCATGGTGCTGGCCGCGGCCGGTGACGTGCGCCAGGC]


>consensus_6711#4 CCGCGGACGCGTGGGCGGTCGGGCTGTTCATCGATGCCGGGTCCCGGTACGAGGACAAGC ACAGCAACGGTACGGCAAACTTCTTCGAACACCTAGCGTTTAAGGGAACGACCAAACGAT CACAGTCCGCGCTGGAGCAGGAGGTGGAGAGTATGGGCGCACAGCTGGACGCGAGCACGG GCCGGGACCAGACCTCCTTCACCGCCCGCTGCCTGTCGAAGGACGTCCCGAAGCTGGTCG AAATTCTGGCCGACGTCGTGCAGAACCCCCGGCTGGACGATGCGGACGTGAAGCGCGCCC GCGAGGTTATCCTGGGCGAGATCGAACAGGTGGACGCGGGCAACCTGCGGGAGGTCGTGT TCGACCACCTGCACTCGACCGCGTTCCAGGGCACGTCGCTCAGCAACACCGTGTGGGGCC CGAGCAGCAACATCCGCTCGATCAAGGCGGACGACGTGCGCGGTTACGTCAACTCGCACT ACAAGGCGCCGCGCATGGTGCTGGCCGCGGCCGGTGACGTGCGCCAGGC



consensusID : consensus_6711#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 484
fasta sequence
                              [NAGCAGATTACGGCACGAGGCGCCATACGAAAATCTTGNACATCGATCAACACACGCTCCGCTTTCAGGAAAGTGCTGCAAAGGGGCAAAGGAAAAGTGTTTATTTATCGGCGTTCTTCTGCTGCAGTAATGGAAATCAAACAATTNGCTTANAAGTTTCCCCGNAGAGTGCACGNANAACCGAAGCATGTCGGGAAGACGGGTGCCGGCGAACGAGGACCTCTCGAACGTGGAGTTCGAGACGAGNCGAAGTATGTGGAGGTGCTGCCGACGCTTCAACTCAATGGGGCTGCGGGAAGAGCTTCTGCGGGGTATTTACGCGTACGGTTTTNGAGAAACCGTCCGCCATCCAGCAGCGAAGCATTCAGCCAAGTCGTGAAGGGCCGTGATGTCATCGCACAGGCACAGTCCGGTACGGGTAAGACGGCCACCTTCTCGATATCCATTCTGCAGTTCGATGGACACGACGCTGCGAGAGACGCAN]

[+] EMBL BX619560             [NAGCAGATTACGGCACGAGGCGCCATACGAAAATCTTGNACATCGATCAACACACGCTCCGCTTTCAGGAAAGTGCTGCAAAGGGGCAAAGGAAAAGTGTTTATTTATCGGCGTTCTTCTGCTGCAGTAATGGAAATCAAACAATTNGCTTANAAGTTTCCCCGNAGAGTGCACGNANAACCGAAGCATGTCGGGAAGACGGGTGCCGGCGAACGAGGACCTCTCGAACGTGGAGTTCGAGACGAGNCGAAGTATGTGGAGGTGCTGCCGACGCTTCAACTCAATGGGGCTGCGGGAAGAGCTTCTGCGGGGTATTTACGCGTACGGTTTTNGAGAAACCGTCCGCCATCCAGCAGCGAAGCATTCAGCCAAGTCGTGAAGGGCCGTGATGTCATCGCACAGGCACAGTCCGGTACGGGTAAGACGGCCACCTTCTCGATATCCATTCTGCAGTTCGATGGACACGACGCTGCGAGAGACGCAN]


>consensus_6711#5 NAGCAGATTACGGCACGAGGCGCCATACGAAAATCTTGNACATCGATCAACACACGCTCC GCTTTCAGGAAAGTGCTGCAAAGGGGCAAAGGAAAAGTGTTTATTTATCGGCGTTCTTCT GCTGCAGTAATGGAAATCAAACAATTNGCTTANAAGTTTCCCCGNAGAGTGCACGNANAA CCGAAGCATGTCGGGAAGACGGGTGCCGGCGAACGAGGACCTCTCGAACGTGGAGTTCGA GACGAGNCGAAGTATGTGGAGGTGCTGCCGACGCTTCAACTCAATGGGGCTGCGGGAAGA GCTTCTGCGGGGTATTTACGCGTACGGTTTTNGAGAAACCGTCCGCCATCCAGCAGCGAA GCATTCAGCCAAGTCGTGAAGGGCCGTGATGTCATCGCACAGGCACAGTCCGGTACGGGT AAGACGGCCACCTTCTCGATATCCATTCTGCAGTTCGATGGACACGACGCTGCGAGAGAC GCAN



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6711#2      ------------------------------------------------------------
consensus_6711#4      ------------------------------------------------------------
consensus_6711#0      AGGCAAGAATCGCGCACGAGGGTGGTGTAGATTTGCTTATCACCTCCCTATTCTCAGGTT 60
consensus_6711#5      ------------------------------------------------------------
consensus_6711#1      ------------------------------------------------------------
consensus_6711#3      ------------------------------------------------------------
                                                                                  

consensus_6711#2      ------------------------------------------------------------
consensus_6711#4      ------------------------------------------------------------
consensus_6711#0      GCGCTCCTCCATTGCCTGGACTACCACTGCCTTCACACTTCAGAATACGCGCAGTTGCGA 120
consensus_6711#5      ------------------------------------------------------------
consensus_6711#1      AGTTATCACGGAAGATTCGATTCTTAAGTGGTACAAGGAGGGCCATTCGAACAAGGGAAA 60
consensus_6711#3      ------------------------------------------------------------
                                                                                  

consensus_6711#2      ------------------------------------CGACCCACGCG-TCCGGTCTCCCA 23
consensus_6711#4      ------------------------------------------------------------
consensus_6711#0      AGGATGGGGAACGAATTGGGCTCACACTGTACTGGAATTGCTACGTC-TGTAGGAAAAGG 179
consensus_6711#5      ------------------------------------------------------------
consensus_6711#1      GATGCACTTCCTTGAACAGATGAAAAAATTCATTGAGTGGCTACAAAATGCCGAAGAAGG 120
consensus_6711#3      ------------------------------------------------------------
                                                                                  

consensus_6711#2      CGTCCGTCCTGTGCTGTGCTTCACGTCGGTTTCGTCTTCATATACTCGGCTTTGATACTT 83
consensus_6711#4      ------------------------------------------------------------
consensus_6711#0      GATTGCTCCAGCTCATTCCAATCGGTTCATTATGACATCCAATACCCGGGCCCCTCATCA 239
consensus_6711#5      ------------------------------------------------------------
consensus_6711#1      TAATGTGCTTGTTATGCTGCTTTTGT---TTGCGGTTTCGATTGTCTCATTTAGACAATC 177
consensus_6711#3      ------------------------------------------------------------
                                                                                  

consensus_6711#2      TCCCGGTCGGCAACATCTGGCAGCAAGTGAGGTGTTT--GCTCGTGTTGCAACACTACGT 141
consensus_6711#4      ------------------------------------------------------------
consensus_6711#0      TAAAATTGTATCTCCTCATCATAGAATTGTGCAACGC--GCCGAAGACATCTCCTGGCTC 297
consensus_6711#5      ------------------------------------------------------------
consensus_6711#1      GTCCGGTTAGTTGCATCATGGCAAACACGGACTGCATTGGTTCCAAGGTGTGCAGCGTTC 237
consensus_6711#3      --------------------------------------CCGCGGACGCGTGGGCGGACGC 22
                                                                                  

consensus_6711#2      ATGTAGCAGCGGGCCTGGGCGAACGATCACTGTGCCCCCT-CCTCCCCCCGGTAAGGACG 200
consensus_6711#4      ------------CCGCGGACGCGTGGGCGGTCGGGCTGTT-CATC-----------GATG 36
consensus_6711#0      GCGCTTAGGCGTACCTGCGCACGGGAATGATATGGAAGCTGTTTCCAGTTTTGCAAGTTA 357
consensus_6711#5      ----------------------------------------------------------NA 2
consensus_6711#1      GTTCTTGAATTGATGCGATAGTAAAGTTGCCGCGAGTTCTACTTATCTTTTTTTCTATCT 297
consensus_6711#3      GTGGGCCGGGGCAGAAGCTAAAAAAATTGCTACGGACCTTAATACAAAGAACCTGGTCTT 82
                                                                                  

consensus_6711#2      CAAAAGCTTGACGTGAA-----CGTGCAACGATGCCACTGTTTGGTAAATCGCAGAAAAG 255
consensus_6711#4      CCGGGTCCCGGTACGAG-----GACA-AGCACAGCAACGGTACGGCAAACTTCTTCGAAC 90
consensus_6711#0      CTAGCGACCGTTTTCAA-----AGATGCCTATCGTCTTCGTACCATTGCGTCCAGACGAT 412
consensus_6711#5      GCAGATTACGGCACGAG-----G----CGCCATACGAAAATCTTGNACATCGATCAACAC 53
consensus_6711#1      CGAAATAGAAAGACGAG-----AG---CTTAAGCAATACAGATTATTAGTGTTCCACATT 349
consensus_6711#3      GAAAGCCCAAGTGCTAGCTGGCGGGCGCGGAAAAGGAAGCTTTAAGAATGGGTTGAAGGG 142
                                     *                                            

consensus_6711#2      TCCACAGGAGCTGGTGAAGTCGCTGAAGGAG-GCGGTCAATGCGCTGGAGCGCGGCGATA 314
consensus_6711#4      ACC-TAGCGTTTAAGGGAACGACCAAACGATCACAGTC--CGCGCTGGAGCAGGAGGTGG 147
consensus_6711#0      TGGTCAG--TTTCATCCAGCTGCACTACTACCCCAACTGGGCCACTGGTTGGCAATAAGT 470
consensus_6711#5      ACGCTCCGCTTTCAGGAAAGTGCTGCAAAGGGGCAA----AGGAAAAGTGTTTATTTATC 109
consensus_6711#1      TTGATATAAATTTAGCCCACT-CAAGAGGAATGTATCATTCAAATACTAATGATGTGTTT 408
consensus_6711#3      TGGTGTCCGGGTGGTGTTTTCACCCCAGGAG-GCAGAAGATAT-TTCGGGCAAAATGATC 200
                                 *          *   *                                 

consensus_6711#2      AGAAGGCGGAAAAGGCACAGGAAGATGTGAGCA-AGAACCTGGTGTCGATCAAGAACATG 373
consensus_6711#4      AGAGTATGGGC---GCACAGCTGGACGCGAGCA-CGGGCCGGG-----ACCA--GACCTC 196
consensus_6711#0      GGCTGTGGATTAAAGTATCTGATGGCG-GAGAA-TGGAGTTGGTCT--ACAACCGCGCGA 526
consensus_6711#5      GGCGTTCTTCTGCTGCAGTAATGGA---AATCA-AACAATTNGCTT--ANAA--GTTTCC 161
consensus_6711#1      CTATTTCTATCTCCTTACTATTTTACA-GAAAG-CGAATCTGAGGAAGACTAAATCTACA 466
consensus_6711#3      AACCAGCTTCTCGTCACTAAACAAACGGGAGCAGCGGGACGTATTTGCAATTCTGTCATG 260
                                                   *                  *           

consensus_6711#2      TTGTGCGGTACGGCCGATGCCGAGCCGCAGACCGAGATCGTCATCTCGC-AGCTGGCCCA 432
consensus_6711#4      CTTCACCGCCCGCTGCCTGTCGAAGGACGTCCCGAAGCTG--GTCGAAA-TTCTGGCCGA 253
consensus_6711#0      GTGTGTCTACTGCATTCTTCTAAGGCGTGTGGTCGCTGCGTGATGGCGGGTTTTGGAGGA 586
consensus_6711#5      CCGNAGAGTGCACGNANAACCGAAGCATGTCGGGAAGACG-GGTGCCGG----CGAACGA 216
consensus_6711#1      CTGTCACGGTGGCGCTCATCTCGTTTTTGTCGTCTTTTTTTGGATACGT-TTTTCATCCC 525
consensus_6711#3      GTGGCGGAACGAAAGTTTCCTCGCCGAGAATTCTACTTTGCCGTTATGA----TGGAGCG 316
                                                                                  

consensus_6711#2      CGAGCTGTACAGCACCGATCTGCTGCTGCTGCTG-ATACAGAACCT-GAACCGCATTGAC 490
consensus_6711#4      CGTCGTGCAGAACCCCCGGCTG--GACGATGCGG-ACGTGAAGCGC-GC-CCGCGAGGTT 308
consensus_6711#0      CGTCA-GCGATGGTGCAACCTGCCCATCGCTTCG-TTGCAGCTTGCTGTCTGGCCAAGTT 644
consensus_6711#5      GGACCTCTCGAACGTGGAGTTCGAGACGA-GNCG-AAGTATGTGGAGGTGCTGCCGACGC 274
consensus_6711#1      TACCCACCACGCACCGTTTTTACCTACAATAGCG-CGCAACCCATCACCACCACCACCAC 584
consensus_6711#3      TGCTTTCAATGGACCTGTTCTAATCGCATCGTCTCAAGGAGGTGTCAACATTGAAGAAGT 376
                                          *                                       

consensus_6711#2      TTCGAGGGCA-A---GAAGGACGTGGCACACATCTTCAACAATGTGATCAGACGCCAGAT 546
consensus_6711#4      ATCCTGGGCG-A---GATCGAACAGGTGGACGCG---GGCAACCTG------CGGGAGGT 355
consensus_6711#0      TTTCTCTTC------GACTCATTTGGTGGTCTCCTCGGGAAGACGGGCATCAGACCATGC 698
consensus_6711#5      TTCAACTCAATG---GGGCTGCGGGAAGAGCTTCTGCGGGGTATTTACGCGTACGGTTTT 331
consensus_6711#1      CACCAGTCACGATC-ACATCGCCTGGCGTTCTTCTT-TGCAATAAACTAAACGAGTGTTC 642
consensus_6711#3      GGCTGCTGAAAACCCAGATGCAATTGTATACGAACCTATTGACATTA-ACAAAGGTCTGC 435
                                                    *                             

consensus_6711#2      CGG-CACCCGACTGCCGACGGTCGAGTACAT-CTGCACCAAGCCGGAGATTCTGTTCACG 604
consensus_6711#4      CG--TGTTCGACCACCTGCACTCGACCGCGTTCCAGGGCACGTCGCTCAGCAACACCGTG 413
consensus_6711#0      AATAGAAGCTACGACGTTGTATAGGAAGAACGGTGCTNCACGGCTGTTCCCAAGTTGGGA 758
consensus_6711#5      NGAGAAACCGTCCGCCATCCAGCAGCGAAGCATTCAGCCAAGTCGTGAAGGGCCGTGATG 391
consensus_6711#1      CGCGCGCGCGCGCACCAATT-CAAACAACATCCTTTATCCCATCGTCCCCCCCGGCGGAA 701
consensus_6711#3      AGAAGGAGCAAGCAGTTCAGGTCGCCAAGAAGGTGGGACTCAATGACAAAGTGGAGGAGA 495
                              *                             *                     

consensus_6711#2      CTGATGGCCGGGTACGA-GCAT---CAGGA-GATCGCGCTCAACTGTGGCATCAT-GT-T 657
consensus_6711#4      -TGGGGCCCGAGCAGCA-ACAT---CCGCTCGATCAAGGCGGACGACG-TGCGCG-GT-T 465
consensus_6711#0      AGAAAGCCTGGTTGGAAGACCT---AAACTCGAGCGAAGCGGCCCANGTTATGGT-GTCT 814
consensus_6711#5      TCATCGCACAGGCACAG---TC---CGGTACGGGTAAGACGGCCACCTTCTCGAT-ATCC 444
consensus_6711#1      -CGCAGCAAAAGCACAACA-AT---ACGTATTCTCATTTTTATCCCCGTTATTATTATTT 756
consensus_6711#3      CCGCTAAAATGTTGCTCAATATGTACGATTTGTTTGTCAAGAAGGATGCATTGCTGATTG 555
                                                                               *  

consensus_6711#2      GCGCGAGTGCGCCCGGCACGAGGCGCT-C-GCAAAGATCATGC-TCCACTCGGAGGAGTT 714
consensus_6711#4      ACGTCAACTCGCAC--TACAAGGCGCCGC-GCATGGTGCTGGC-CGCGGCCGGTGACGTG 521
consensus_6711#0      ACTTCATCACTTCC---TGGCNACGTTAC-GGANTGTGGGTANGTTCGCCCGAAGGGGAA 870
consensus_6711#5      ATTCTGCAGTTCGATGGACACGACGCTGC-GAGAGACGCAN------------------- 484
consensus_6711#1      TTTTTTTATTAGAACAATGAAAGCACCCC-GTGGTGCTGAATAGAACGAACAGCGGCTGC 815
consensus_6711#3      AGATTAATCCGTAT-GCGGAAGATGCCGCTGAAACGTATTTTGCCCTTGATGCCAAAATG 614
                                                  * *                             

consensus_6711#2      TTT------------------------------------------------------ 717
consensus_6711#4      CGCCAGGC------------------------------------------------- 529
consensus_6711#0      TGTTCGGCCGAANNTTGCCAG------------------------------------ 891
consensus_6711#5      ---------------------------------------------------------
consensus_6711#1      TGCTAACCCCTTCCGCTTCTCTCCATGCTCTATCTCCCGTGGGCATGGGAGGGGAGG 872
consensus_6711#3      CGTTTTGACGACAATGCC--------------------------------------- 632
                                                                               




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)