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Anopheles gambiae
cluster # 6844 cluster # 6844       Sequences # 6       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6844#0 length = 717 sequences # 1  
consensus_6844#1 length = 702 sequences # 1  
consensus_6844#2 length = 634 sequences # 1  
consensus_6844#3 length = 630 sequences # 1  
consensus_6844#4 length = 521 sequences # 1  
consensus_6844#5 length = 360 sequences # 1  

consensusID : consensus_6844#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 717
fasta sequence
                              [AATCGCCCGAGGTTTAAAACAGCAGCGCAGAGAAGNCGGGGATGAAAAGAGCTNACACAGCACAGAACTCACACTCAACACGAGCAAAAACAACACCACCACAATAACAGAAACGTAAATGATTTGCAATACTAAAGCTTAATTAACATTGATAATAGTAGAAACCGGGTGAGGAAAAACTCCAAATTCGAAGCAGGAAGAGCATTAAACACACGCGCGCGTACACAGCACTGTTGGTCCGGCACACAGCCCACACTTTGGAAGGGAGTGGGACAAATACACCCACCACAATAATCTACCGGACGATCGACGATCGACTAGCACCGTTTGCGGGAAGGAGGAAATAGTTTGGCCTTTTGCCTTACCTTTTTCGCTGGTTTTGGTATAGAATTTCCCCATTTGCTTACCTATGGCACGGTTTAGTTTCCTGTGTCAATTTTTTTCTCTCTTTTGAATAAGATTTTTAACGCGATGTCCATTGCTTCTTCTTTGTGTGGATCACGTTNGCTGCCACTTCTTTTATTTCGTTTTGCTGTTTTNATCAGTAAGTTTTGCATTCGTTCATTTTCTTTTTATATGTGGACATAGCAAATTGCGCTTAACCATATCGAAATTATGGTTATAATGCGTTCTTCTTTCCCGTCGTCTCTTTCTACTACTNTGTAAGCGTGTACCTGTATGGTCACTGTTACACAATTTGAACTGGGTCGACCAATT]

[+] EMBL AL930915             [AATCGCCCGAGGTTTAAAACAGCAGCGCAGAGAAGNCGGGGATGAAAAGAGCTNACACAGCACAGAACTCACACTCAACACGAGCAAAAACAACACCACCACAATAACAGAAACGTAAATGATTTGCAATACTAAAGCTTAATTAACATTGATAATAGTAGAAACCGGGTGAGGAAAAACTCCAAATTCGAAGCAGGAAGAGCATTAAACACACGCGCGCGTACACAGCACTGTTGGTCCGGCACACAGCCCACACTTTGGAAGGGAGTGGGACAAATACACCCACCACAATAATCTACCGGACGATCGACGATCGACTAGCACCGTTTGCGGGAAGGAGGAAATAGTTTGGCCTTTTGCCTTACCTTTTTCGCTGGTTTTGGTATAGAATTTCCCCATTTGCTTACCTATGGCACGGTTTAGTTTCCTGTGTCAATTTTTTTCTCTCTTTTGAATAAGATTTTTAACGCGATGTCCATTGCTTCTTCTTTGTGTGGATCACGTTNGCTGCCACTTCTTTTATTTCGTTTTGCTGTTTTNATCAGTAAGTTTTGCATTCGTTCATTTTCTTTTTATATGTGGACATAGCAAATTGCGCTTAACCATATCGAAATTATGGTTATAATGCGTTCTTCTTTCCCGTCGTCTCTTTCTACTACTNTGTAAGCGTGTACCTGTATGGTCACTGTTACACAATTTGAACTGGGTCGACCAATT]


>consensus_6844#0 AATCGCCCGAGGTTTAAAACAGCAGCGCAGAGAAGNCGGGGATGAAAAGAGCTNACACAG CACAGAACTCACACTCAACACGAGCAAAAACAACACCACCACAATAACAGAAACGTAAAT GATTTGCAATACTAAAGCTTAATTAACATTGATAATAGTAGAAACCGGGTGAGGAAAAAC TCCAAATTCGAAGCAGGAAGAGCATTAAACACACGCGCGCGTACACAGCACTGTTGGTCC GGCACACAGCCCACACTTTGGAAGGGAGTGGGACAAATACACCCACCACAATAATCTACC GGACGATCGACGATCGACTAGCACCGTTTGCGGGAAGGAGGAAATAGTTTGGCCTTTTGC CTTACCTTTTTCGCTGGTTTTGGTATAGAATTTCCCCATTTGCTTACCTATGGCACGGTT TAGTTTCCTGTGTCAATTTTTTTCTCTCTTTTGAATAAGATTTTTAACGCGATGTCCATT GCTTCTTCTTTGTGTGGATCACGTTNGCTGCCACTTCTTTTATTTCGTTTTGCTGTTTTN ATCAGTAAGTTTTGCATTCGTTCATTTTCTTTTTATATGTGGACATAGCAAATTGCGCTT AACCATATCGAAATTATGGTTATAATGCGTTCTTCTTTCCCGTCGTCTCTTTCTACTACT NTGTAAGCGTGTACCTGTATGGTCACTGTTACACAATTTGAACTGGGTCGACCAATT



consensusID : consensus_6844#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 702
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGTGGGACAAATACACCCACCACAATAATCTACCGGACGATCGACGATCGACTAGCACCGTTTGCTGGGAGGAGAAAATAGTTTTTCTCCTTTTGCCTTACCTTTTTCGCTGGTTTTGGTATAGAATTTCCCCATTTGCTTACCTATGGCACGGTTTAGTTTTTTGTTGTAATTTTTTTTCTCTCTTTTCAATAAGATTTTTAAGCGATGTCCACTGCTTCTTCTTTGTGTGGTCACGTTTGCTGCCACTTCTTTTATTTCGTTTTTTGCTGTTTTTATCAGTAAGTTTTGCATTTGTTTTTTTTTATTTGTGGAATAGAAATTGCGCTTAACCATATCGAAATGATGGTTATAATGCGTTCTTCTTTCCCGTCGTCTCTTTCTATTACTTTGTTTGCGTGTACTGTAACACAATTTGAACTGTGTTCGTCAAATGTTTTTTTTTCCCCGGACGAATCGTAACAATTTCGATGAAGTATTTAAGCGCAACAAGTCAAATATTAAATTGAATTACTTGTAATTCATTATCTAGTAACGTTCTCTACTTTTTAATCTATTTTTTTTGCTGTATTTTTCGTTGTTGGTTGTAAACTCATTTGCGTTCCCTTCCAAATATTTATTTGTGTTTATGGTGGATTTTGAAACGGAGTCCAAAGGCGTGCGTGTGTGCGTGTGTA]

[+] EMBL BM631722             [CCGCCCACGCGTCCGCCCACGCGTCCGTGGGACAAATACACCCACCACAATAATCTACCGGACGATCGACGATCGACTAGCACCGTTTGCTGGGAGGAGAAAATAGTTTTTCTCCTTTTGCCTTACCTTTTTCGCTGGTTTTGGTATAGAATTTCCCCATTTGCTTACCTATGGCACGGTTTAGTTTTTTGTTGTAATTTTTTTTCTCTCTTTTCAATAAGATTTTTAAGCGATGTCCACTGCTTCTTCTTTGTGTGGTCACGTTTGCTGCCACTTCTTTTATTTCGTTTTTTGCTGTTTTTATCAGTAAGTTTTGCATTTGTTTTTTTTTATTTGTGGAATAGAAATTGCGCTTAACCATATCGAAATGATGGTTATAATGCGTTCTTCTTTCCCGTCGTCTCTTTCTATTACTTTGTTTGCGTGTACTGTAACACAATTTGAACTGTGTTCGTCAAATGTTTTTTTTTCCCCGGACGAATCGTAACAATTTCGATGAAGTATTTAAGCGCAACAAGTCAAATATTAAATTGAATTACTTGTAATTCATTATCTAGTAACGTTCTCTACTTTTTAATCTATTTTTTTTGCTGTATTTTTCGTTGTTGGTTGTAAACTCATTTGCGTTCCCTTCCAAATATTTATTTGTGTTTATGGTGGATTTTGAAACGGAGTCCAAAGGCGTGCGTGTGTGCGTGTGTA]


>consensus_6844#1 CCGCCCACGCGTCCGCCCACGCGTCCGTGGGACAAATACACCCACCACAATAATCTACCG GACGATCGACGATCGACTAGCACCGTTTGCTGGGAGGAGAAAATAGTTTTTCTCCTTTTG CCTTACCTTTTTCGCTGGTTTTGGTATAGAATTTCCCCATTTGCTTACCTATGGCACGGT TTAGTTTTTTGTTGTAATTTTTTTTCTCTCTTTTCAATAAGATTTTTAAGCGATGTCCAC TGCTTCTTCTTTGTGTGGTCACGTTTGCTGCCACTTCTTTTATTTCGTTTTTTGCTGTTT TTATCAGTAAGTTTTGCATTTGTTTTTTTTTATTTGTGGAATAGAAATTGCGCTTAACCA TATCGAAATGATGGTTATAATGCGTTCTTCTTTCCCGTCGTCTCTTTCTATTACTTTGTT TGCGTGTACTGTAACACAATTTGAACTGTGTTCGTCAAATGTTTTTTTTTCCCCGGACGA ATCGTAACAATTTCGATGAAGTATTTAAGCGCAACAAGTCAAATATTAAATTGAATTACT TGTAATTCATTATCTAGTAACGTTCTCTACTTTTTAATCTATTTTTTTTGCTGTATTTTT CGTTGTTGGTTGTAAACTCATTTGCGTTCCCTTCCAAATATTTATTTGTGTTTATGGTGG ATTTTGAAACGGAGTCCAAAGGCGTGCGTGTGTGCGTGTGTA



consensusID : consensus_6844#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 634
fasta sequence
                              [CTGATAATAGTTGAAACCGGGTGAGGAAAAACTCCAAATTCGAAGCAGGAAGAGCATTGAACACACGCGCGCGTACACAGCGCTGTTGGTCCGGCACACAGCCCACACTTTGGAAGGGAGTGGGACAAATACACCCACCACAATAATCTACCGGACGATCGACGATCGACTAGCACCGTTTGCTGGGAGGAGAAAATAGTTTTTCTCCTTTTGCCTTACCTTTTTCGCTGGTTTTGGTATAGAATTTCCCCATTTGCTTACCTATGGCACGGTTTAGTTTTTTGTTGTAATTTTTTTTCTCTCTTTTCAATAAGATTTTTAAGCGATGTCCACTGCTTCTTCTTTGTGTGGTCACGTTTGCTGCCACTTCTTTTATTTCGTTTTTTGCTGTTTTTATCAGTAAGTTTTGCATTTGTTTTTTTTTATTTGTGGAATAGAAATTGCGCTTAACCATATCGAAATGATGGTTATAATGCGTTCTTCTTTCCCGTCGTCTCTTTCTATTACTTTGTTTGCGTGTACTGTAACACAATTTGAACTGTGTTCGTCAAATGTTTTTTTTTCCCCGGACGAATCGTAACAATTTCGATGAAGTATTTAAGCGCAACAAGTCAAATATTAAATTGAATTACTT]

[+] EMBL BX626261             [CTGATAATAGTTGAAACCGGGTGAGGAAAAACTCCAAATTCGAAGCAGGAAGAGCATTGAACACACGCGCGCGTACACAGCGCTGTTGGTCCGGCACACAGCCCACACTTTGGAAGGGAGTGGGACAAATACACCCACCACAATAATCTACCGGACGATCGACGATCGACTAGCACCGTTTGCTGGGAGGAGAAAATAGTTTTTCTCCTTTTGCCTTACCTTTTTCGCTGGTTTTGGTATAGAATTTCCCCATTTGCTTACCTATGGCACGGTTTAGTTTTTTGTTGTAATTTTTTTTCTCTCTTTTCAATAAGATTTTTAAGCGATGTCCACTGCTTCTTCTTTGTGTGGTCACGTTTGCTGCCACTTCTTTTATTTCGTTTTTTGCTGTTTTTATCAGTAAGTTTTGCATTTGTTTTTTTTTATTTGTGGAATAGAAATTGCGCTTAACCATATCGAAATGATGGTTATAATGCGTTCTTCTTTCCCGTCGTCTCTTTCTATTACTTTGTTTGCGTGTACTGTAACACAATTTGAACTGTGTTCGTCAAATGTTTTTTTTTCCCCGGACGAATCGTAACAATTTCGATGAAGTATTTAAGCGCAACAAGTCAAATATTAAATTGAATTACTT]


>consensus_6844#2 CTGATAATAGTTGAAACCGGGTGAGGAAAAACTCCAAATTCGAAGCAGGAAGAGCATTGA ACACACGCGCGCGTACACAGCGCTGTTGGTCCGGCACACAGCCCACACTTTGGAAGGGAG TGGGACAAATACACCCACCACAATAATCTACCGGACGATCGACGATCGACTAGCACCGTT TGCTGGGAGGAGAAAATAGTTTTTCTCCTTTTGCCTTACCTTTTTCGCTGGTTTTGGTAT AGAATTTCCCCATTTGCTTACCTATGGCACGGTTTAGTTTTTTGTTGTAATTTTTTTTCT CTCTTTTCAATAAGATTTTTAAGCGATGTCCACTGCTTCTTCTTTGTGTGGTCACGTTTG CTGCCACTTCTTTTATTTCGTTTTTTGCTGTTTTTATCAGTAAGTTTTGCATTTGTTTTT TTTTATTTGTGGAATAGAAATTGCGCTTAACCATATCGAAATGATGGTTATAATGCGTTC TTCTTTCCCGTCGTCTCTTTCTATTACTTTGTTTGCGTGTACTGTAACACAATTTGAACT GTGTTCGTCAAATGTTTTTTTTTCCCCGGACGAATCGTAACAATTTCGATGAAGTATTTA AGCGCAACAAGTCAAATATTAAATTGAATTACTT



consensusID : consensus_6844#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 630
fasta sequence
                              [CAGAATCCGCACGANGGATTGAAACGGGTGAGGAAAAACTCCAAATTCGAAGCAGGAAGAGCATTGAACACACGCGCGCGTACACAGCGCTGTTGGTCCGGCACACAGCCCACACTTTGGAAGGGAGTGGGACAAATACACCCACCACAATAATCTACCGGACGATCGACGATCGACTAGCACCGTTTGCTGGGAGGAGAAAATAGTTTTTCTCCTTTTGCCTTACCTTTTTCGCTGGTTTTGGTATAGAATTTCCCCATTTGCTTACCTATGGCACGGTTTAGTTTTTTGTTGTAATTTTTTTTCTCTCTTTTCAATAAGATTTTTAAGCGATGTCCACTGCTTCTTCTTTGTGTGGTCACGTTTGCTGCCACTTCTTTTATTTCGTTTTTTGCTGTTTTTATCACGTAAGTTTTGCATTTGTTTATCTGNATTTGTGGAATAGAAATTGCGCTTAACCATATCGAAATGATGGTTATAATGCGTTCTTCTTTCCCGTCGTCTCTTTCTATTTACTTTGTTTGCGCTGTACTGTAACACAATTTGAACTGTGTTCGTCAAATGTTTTTTTTTCCCCGGACGAATCGTAACAATTTCGGATGAAGTATTTAACGCAACAAGTCAAATATT]

[+] EMBL BX466117             [CAGAATCCGCACGANGGATTGAAACGGGTGAGGAAAAACTCCAAATTCGAAGCAGGAAGAGCATTGAACACACGCGCGCGTACACAGCGCTGTTGGTCCGGCACACAGCCCACACTTTGGAAGGGAGTGGGACAAATACACCCACCACAATAATCTACCGGACGATCGACGATCGACTAGCACCGTTTGCTGGGAGGAGAAAATAGTTTTTCTCCTTTTGCCTTACCTTTTTCGCTGGTTTTGGTATAGAATTTCCCCATTTGCTTACCTATGGCACGGTTTAGTTTTTTGTTGTAATTTTTTTTCTCTCTTTTCAATAAGATTTTTAAGCGATGTCCACTGCTTCTTCTTTGTGTGGTCACGTTTGCTGCCACTTCTTTTATTTCGTTTTTTGCTGTTTTTATCACGTAAGTTTTGCATTTGTTTATCTGNATTTGTGGAATAGAAATTGCGCTTAACCATATCGAAATGATGGTTATAATGCGTTCTTCTTTCCCGTCGTCTCTTTCTATTTACTTTGTTTGCGCTGTACTGTAACACAATTTGAACTGTGTTCGTCAAATGTTTTTTTTTCCCCGGACGAATCGTAACAATTTCGGATGAAGTATTTAACGCAACAAGTCAAATATT]


>consensus_6844#3 CAGAATCCGCACGANGGATTGAAACGGGTGAGGAAAAACTCCAAATTCGAAGCAGGAAGA GCATTGAACACACGCGCGCGTACACAGCGCTGTTGGTCCGGCACACAGCCCACACTTTGG AAGGGAGTGGGACAAATACACCCACCACAATAATCTACCGGACGATCGACGATCGACTAG CACCGTTTGCTGGGAGGAGAAAATAGTTTTTCTCCTTTTGCCTTACCTTTTTCGCTGGTT TTGGTATAGAATTTCCCCATTTGCTTACCTATGGCACGGTTTAGTTTTTTGTTGTAATTT TTTTTCTCTCTTTTCAATAAGATTTTTAAGCGATGTCCACTGCTTCTTCTTTGTGTGGTC ACGTTTGCTGCCACTTCTTTTATTTCGTTTTTTGCTGTTTTTATCACGTAAGTTTTGCAT TTGTTTATCTGNATTTGTGGAATAGAAATTGCGCTTAACCATATCGAAATGATGGTTATA ATGCGTTCTTCTTTCCCGTCGTCTCTTTCTATTTACTTTGTTTGCGCTGTACTGTAACAC AATTTGAACTGTGTTCGTCAAATGTTTTTTTTTCCCCGGACGAATCGTAACAATTTCGGA TGAAGTATTTAACGCAACAAGTCAAATATT



consensusID : consensus_6844#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 521
fasta sequence
                              [CCGCCACAATAATCTACCGGACGATCGACGATCGACTAGCACCGTTTGCGGGAAGGAGAAAATGGTTTGGCTTTCTGCCTTACCTTTTTCGCTGGTTTTGGTTTAAAATTTTCCCTTTTTTAACCTATGGCACGGTTTAGTTTTTTGTTGTAATTTTTTTGTTCTCTCTTTTGAATAAGATTTTTAAGCGATGTCCGGTGCTTCTTCTTTGTGTGGTCACGTTTGTTGCCACTTCTTTTATTTCGTTTTTTGCTGTTTTTATCAGTAAGTTTTGCATTTGTTTTTTTTTATTTGTGGAATAGAAATTGCGCTTAACCATATCGAAATGATGGTTAAAATGCGTTCTTCTTTCCCGTCGTCTCTTTCTACTACTTTGTTTGCTTGTACTGTATTGTACTGTAACACAATTTGAACTGTGTTCGTCAAATGTTTTTTTTTTCCCCGGACGAATCGTAACAATATCGATGAAGTATTTAAGCGCAACCTCAAATATTAAATTGAATTACTTGTAATTCATTATC]

[+] EMBL BM617161             [CCGCCACAATAATCTACCGGACGATCGACGATCGACTAGCACCGTTTGCGGGAAGGAGAAAATGGTTTGGCTTTCTGCCTTACCTTTTTCGCTGGTTTTGGTTTAAAATTTTCCCTTTTTTAACCTATGGCACGGTTTAGTTTTTTGTTGTAATTTTTTTGTTCTCTCTTTTGAATAAGATTTTTAAGCGATGTCCGGTGCTTCTTCTTTGTGTGGTCACGTTTGTTGCCACTTCTTTTATTTCGTTTTTTGCTGTTTTTATCAGTAAGTTTTGCATTTGTTTTTTTTTATTTGTGGAATAGAAATTGCGCTTAACCATATCGAAATGATGGTTAAAATGCGTTCTTCTTTCCCGTCGTCTCTTTCTACTACTTTGTTTGCTTGTACTGTATTGTACTGTAACACAATTTGAACTGTGTTCGTCAAATGTTTTTTTTTTCCCCGGACGAATCGTAACAATATCGATGAAGTATTTAAGCGCAACCTCAAATATTAAATTGAATTACTTGTAATTCATTATC]


>consensus_6844#4 CCGCCACAATAATCTACCGGACGATCGACGATCGACTAGCACCGTTTGCGGGAAGGAGAA AATGGTTTGGCTTTCTGCCTTACCTTTTTCGCTGGTTTTGGTTTAAAATTTTCCCTTTTT TAACCTATGGCACGGTTTAGTTTTTTGTTGTAATTTTTTTGTTCTCTCTTTTGAATAAGA TTTTTAAGCGATGTCCGGTGCTTCTTCTTTGTGTGGTCACGTTTGTTGCCACTTCTTTTA TTTCGTTTTTTGCTGTTTTTATCAGTAAGTTTTGCATTTGTTTTTTTTTATTTGTGGAAT AGAAATTGCGCTTAACCATATCGAAATGATGGTTAAAATGCGTTCTTCTTTCCCGTCGTC TCTTTCTACTACTTTGTTTGCTTGTACTGTATTGTACTGTAACACAATTTGAACTGTGTT CGTCAAATGTTTTTTTTTTCCCCGGACGAATCGTAACAATATCGATGAAGTATTTAAGCG CAACCTCAAATATTAAATTGAATTACTTGTAATTCATTATC



consensusID : consensus_6844#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 360
fasta sequence
                              [TTTTATAATGTGGAATAGAAATTGCGCTTAACCATATCGAAATTATGGTTATAATGCGTTCTTCTTTCCCGTCGTCACTTTCTATTACTTTGTTTGCGTGTACTGTAACACAATTTGAACTGTGTTCGCCAGTTGGTTTTTTTCCCCCCGGACGAATCGTAACAATTTCGATGAATGATTTAAGCCGCAACCTCAAATATTAAATTGAATTACTTGTTTTTTAATCTATTTTTTTTTGCTGTATTTTTCCCTTCCAAATATTTATTTGTGTTTATGGTGGATTTTGAAACGGAGTCCAAAGGCGTGCGTGTGTGCGTGTGTATGTGTGTGTTCAATGCTATTGTTTCTGTTGGGTGCAAA]

[+] EMBL AGESTG11             [TTTTATAATGTGGAATAGAAATTGCGCTTAACCATATCGAAATTATGGTTATAATGCGTTCTTCTTTCCCGTCGTCACTTTCTATTACTTTGTTTGCGTGTACTGTAACACAATTTGAACTGTGTTCGCCAGTTGGTTTTTTTCCCCCCGGACGAATCGTAACAATTTCGATGAATGATTTAAGCCGCAACCTCAAATATTAAATTGAATTACTTGTTTTTTAATCTATTTTTTTTTGCTGTATTTTTCCCTTCCAAATATTTATTTGTGTTTATGGTGGATTTTGAAACGGAGTCCAAAGGCGTGCGTGTGTGCGTGTGTATGTGTGTGTTCAATGCTATTGTTTCTGTTGGGTGCAAA]


>consensus_6844#5 TTTTATAATGTGGAATAGAAATTGCGCTTAACCATATCGAAATTATGGTTATAATGCGTT CTTCTTTCCCGTCGTCACTTTCTATTACTTTGTTTGCGTGTACTGTAACACAATTTGAAC TGTGTTCGCCAGTTGGTTTTTTTCCCCCCGGACGAATCGTAACAATTTCGATGAATGATT TAAGCCGCAACCTCAAATATTAAATTGAATTACTTGTTTTTTAATCTATTTTTTTTTGCT GTATTTTTCCCTTCCAAATATTTATTTGTGTTTATGGTGGATTTTGAAACGGAGTCCAAA GGCGTGCGTGTGTGCGTGTGTATGTGTGTGTTCAATGCTATTGTTTCTGTTGGGTGCAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6844#0      ------------------------------------AATCGCCCGAGGTTTAAAACAGCA 24
consensus_6844#3      ------------------------------------------------------------
consensus_6844#2      ------------------------------------------------------------
consensus_6844#4      ------------------------------------------------------------
consensus_6844#1      CCGCCCACGCGTCCGCCCACGCGTCCGTGGGACAAATACACCCACCACAATAATCTACCG 60
consensus_6844#5      ------------------------------------------------------------
                                                                                  

consensus_6844#0      GCGCAGAGAAGNCGGGGATGAAAAGAGCTNACACAGCACAGAACTCACACTCAACACGAG 84
consensus_6844#3      ------------------------------------------------------------
consensus_6844#2      ------------------------------------------------------------
consensus_6844#4      ------------------------------------------------------------
consensus_6844#1      GACGATCGACGATCGACTAGCACCGTTTGCTGGGAGGAGAAAATAGTTTTTCTCCTTTTG 120
consensus_6844#5      ------------------------------------------------------------
                                                                                  

consensus_6844#0      CAAAAACAACACCACCACAATAACAGAAACGTAAATGATTTGCAATACTAAAGCTTAATT 144
consensus_6844#3      -----------------------------------------------------CAGAATC 7
consensus_6844#2      ------------------------------------------------------------
consensus_6844#4      ------------------------------------------------------------
consensus_6844#1      CCTTACCTTTTTCGCTGGTTTTGGTATAGAATTTCCCCATTTGCTTACCTATGGCACGGT 180
consensus_6844#5      ------------------------------------------------------------
                                                                                  

consensus_6844#0      AACATTGATAATAGTAGAAACCGGGTGAGGAAAAACTCCAAATTCGAAGCAGGAAGAGCA 204
consensus_6844#3      CGCACGANGGATTG----AAACGGGTGAGGAAAAACTCCAAATTCGAAGCAGGAAGAGCA 63
consensus_6844#2      ----CTGATAATAGTTGAAACCGGGTGAGGAAAAACTCCAAATTCGAAGCAGGAAGAGCA 56
consensus_6844#4      ------------------------------------------------------------
consensus_6844#1      TTAGTTTTTTGTTGTAATTTTTTTTCTCTCTTTTCAATAAGATTTTTAAGCGATGTCCAC 240
consensus_6844#5      ------------------------------------------------------------
                                                                                  

consensus_6844#0      TTAAACACACGCGCGCGTACACAGCACTGTTGGTCCGGCACACAGCCCACACTTTGGAAG 264
consensus_6844#3      TTGAACACACGCGCGCGTACACAGCGCTGTTGGTCCGGCACACAGCCCACACTTTGGAAG 123
consensus_6844#2      TTGAACACACGCGCGCGTACACAGCGCTGTTGGTCCGGCACACAGCCCACACTTTGGAAG 116
consensus_6844#4      ------------------------------------------------------------
consensus_6844#1      TGCTTCTTCTTTGTGTGGTCACGTTTGCTGCCACTTCTTTTATTTCGTTTTTTGCTGTTT 300
consensus_6844#5      ------------------------------------------------------------
                                                                                  

consensus_6844#0      GGAGTGGGACAAATACACCCACCACAATAATCTACCGGACGATCGACGATCGACTAGCAC 324
consensus_6844#3      GGAGTGGGACAAATACACCCACCACAATAATCTACCGGACGATCGACGATCGACTAGCAC 183
consensus_6844#2      GGAGTGGGACAAATACACCCACCACAATAATCTACCGGACGATCGACGATCGACTAGCAC 176
consensus_6844#4      ------------------CCGCCACAATAATCTACCGGACGATCGACGATCGACTAGCAC 42
consensus_6844#1      TTATCAGTAAGTTTTGCATTTGTTTTTTTTTATT-TGTGGAATAGA-AATTGCGCTTAAC 358
consensus_6844#5      ---------------------------TTTTATAATGTGGAATAGA-AATTGCGCTTAAC 32
                                                 *  * *   *    ** **  ** *      **

consensus_6844#0      CGTTTGCGGGAAGGAGGAAATAGTTTGGC--CTTTTGCCTTACCTTTTTCGCTGGTTTTG 382
consensus_6844#3      CGTTTGCTGGGAGGAGAAAATAGTTTTTCTCCTTTTGCCTTACCTTTTTCGCTGGTTTTG 243
consensus_6844#2      CGTTTGCTGGGAGGAGAAAATAGTTTTTCTCCTTTTGCCTTACCTTTTTCGCTGGTTTTG 236
consensus_6844#4      CGTTTGCGGGAAGGAGAAAATGGTTTGGC--TTTCTGCCTTACCTTTTTCGCTGGTTTTG 100
consensus_6844#1      CATAT-CGAAATGATGGTTATAATGCG-----TTCTTCTTTCCCGTCGTCTCT--TTCT- 409
consensus_6844#5      CATAT-CGAAATTATGGTTATAATGCG-----TTCTTCTTTCCCGTCGTCACT--TTCT- 83
                      * * * *        *   **  *        ** * * ** ** *  ** **  ** * 

consensus_6844#0      GTATAGAATTTCCCCATTTGCTTAC-CTATGGCACGGTTTAGTTTCCTGT-GTCAATTTT 440
consensus_6844#3      GTATAGAATTTCCCCATTTGCTTAC-CTATGGCACGGTTTAGTTTTTTGTTGTAATTTTT 302
consensus_6844#2      GTATAGAATTTCCCCATTTGCTTAC-CTATGGCACGGTTTAGTTTTTTGTTGTAATTTTT 295
consensus_6844#4      GTTTAAAATTTTCCC-TTTTTTAAC-CTATGGCACGGTTTAGTTTTTTGTTGTAATTTTT 158
consensus_6844#1      -------ATTACTTTGTTTGCGTGTACTGTAACACAATTTGAACTGTGTTCGTCAAATG- 461
consensus_6844#5      -------ATTACTTTGTTTGCGTGTACTGTAACACAATTTGAACTGTGTTCGCCAGTTGG 136
                             ***      ***       ** *  ***  ***    *    * *  *  *  

consensus_6844#0      TT--TCTCTCTTTTGAATAAGATTTTTAACGCGATGTCCATTGCTTCTTCTTTGTGTGGA 498
consensus_6844#3      TT--TCTCTCTTTTCAATAAGATTTTTAA-GCGATGTCCACTGCTTCTTCTTTGTGTGG- 358
consensus_6844#2      TT--TCTCTCTTTTCAATAAGATTTTTAA-GCGATGTCCACTGCTTCTTCTTTGTGTGG- 351
consensus_6844#4      TTGTTCTCTCTTTTGAATAAGATTTTTAA-GCGATGTCCGGTGCTTCTTCTTTGTGTGG- 216
consensus_6844#1      TT--TTTTTTTCCCCGG-ACGAATCGTAA--CAATTTCGATGAAGTATTTAAGC-GCAA- 514
consensus_6844#5      TT--TTTTTCCCCCCGG-ACGAATCGTAA--CAATTTCGATGAATGATTTAAGCCGCAA- 190
                      **  * * *         * ** *  ***  * ** **         **      *    

consensus_6844#0      TCACGTTNGCTGCCACTTCTTTTATTTCGTTTT--GCTGTTTTNATCA----GTAAGTTT 552
consensus_6844#3      TCACGTTTGCTGCCACTTCTTTTATTTCGTTTTTTGCTGTTTTTATCAC---GTAAGTTT 415
consensus_6844#2      TCACGTTTGCTGCCACTTCTTTTATTTCGTTTTTTGCTGTTTTTATCA----GTAAGTTT 407
consensus_6844#4      TCACGTTTGTTGCCACTTCTTTTATTTCGTTTTTTGCTGTTTTTATCA----GTAAGTTT 272
consensus_6844#1      -CAAGTCAAATATTAAATTGAATTACTTGTAATTCATTATCTAGTAACGTTCTCTACTTT 573
consensus_6844#5      -C--CTCAAATATTAAATTGAATTACTTGT---------------------------TTT 220
                       *   *    *   *  *    *   * **                           ***

consensus_6844#0      TGCATTCGTTCATTTTCTTTTTATATGTGGACATAGC-------------AAATTGCGCT 599
consensus_6844#3      TGCATTTGTTTAT-----CTGNATTTGTGGA-ATAG--------------AAATTGCGCT 455
consensus_6844#2      TGCATTTGTTTTT-----TTTTATTTGTGGA-ATAG--------------AAATTGCGCT 447
consensus_6844#4      TGCATTTGTTTTT-----TTTTATTTGTGGA-ATAG--------------AAATTGCGCT 312
consensus_6844#1      TTAATCTATTTTTTTT-GCTGTATTTTTCGTTGTTGGTTGTAAACTCATTTGCGTTCCCT 632
consensus_6844#5      TTAATCTATTTTTTTTTGCTGTATTTTTC----------------------------CCT 252
                      *  **   **  *      *  ** * *                              **

consensus_6844#0      TAACCATATCGAAATTATGGTTATAATGCGTTCTTCTTTCCCGTCGTCTCTTTCTACT-A 658
consensus_6844#3      TAACCATATCGAAATGATGGTTATAATGCGTTCTTCTTTCCCGTCGTCTCTTTCTATTTA 515
consensus_6844#2      TAACCATATCGAAATGATGGTTATAATGCGTTCTTCTTTCCCGTCGTCTCTTTCTATT-A 506
consensus_6844#4      TAACCATATCGAAATGATGGTTAAAATGCGTTCTTCTTTCCCGTCGTCTCTTTCTACT-A 371
consensus_6844#1      TCCAAATATTTAT-TTGTGTTTATGGTGGATTTTGA---AACGGAGTCCAAAGGCGTG-- 686
consensus_6844#5      TCCAAATATTTAT-TTGTGTTTATGGTGGATTTTGA---AACGGAGTCCAAAGGCGTG-- 306
                      *    ****  *  *  ** ***   **  ** *       **  ***            

consensus_6844#0      CTNTGTAAGCGTGTACCTGTATGGTCACTGTTACACAATTTGAACTGGGTCGACCAATT- 717
consensus_6844#3      CTTTGTTTGCG-----CTGT------ACTGTAACACAATTTGAACTGTGTTCGTCAAATG 564
consensus_6844#2      CTTTGTTTGCG------TGT------ACTGTAACACAATTTGAACTGTGTTCGTCAAATG 554
consensus_6844#4      CTTTGTTTGCTTGTA-CTGTATTGT-ACTGTAACACAATTTGAACTGTGTTCGTCAAATG 429
consensus_6844#1      -CGTGTGTGCGTGTGTA------------------------------------------- 702
consensus_6844#5      -CGTGTGTGCGTGTGTATGTGTGTGTTCAATGCTATTGTTTCTGTTGGGTGCAAA----- 360
                         ***  **                                                  

consensus_6844#0      ------------------------------------------------------------
consensus_6844#3      TTTTTTTTT-CCCCGGACGAATCGTAACAATTTCGGATGAAGTATTTAACGCAACAAGTC 623
consensus_6844#2      TTTTTTTTT-CCCCGGACGAATCGTAACAATTTCGATGAAGTATTTAAGCGCAACAAGTC 613
consensus_6844#4      TTTTTTTTTTCCCCGGACGAATCGTAACAATATCGATGAAGTATTTAAGCGCAACC--TC 487
consensus_6844#1      ------------------------------------------------------------
consensus_6844#5      ------------------------------------------------------------
                                                                                  

consensus_6844#0      ----------------------------------
consensus_6844#3      AAATATT--------------------------- 630
consensus_6844#2      AAATATTAAATTGAATTACTT------------- 634
consensus_6844#4      AAATATTAAATTGAATTACTTGTAATTCATTATC 521
consensus_6844#1      ----------------------------------
consensus_6844#5      ----------------------------------
                                                        




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)