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Anopheles gambiae
cluster # 7131 cluster # 7131       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7131#0 length = 1039 sequences # 5  
consensus_7131#1 length = 485 sequences # 1  

consensusID : consensus_7131#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1039
fasta sequence
                              [CCGGGCGAAAGACAAGGCCGCAATCACTCCCGGCACTGACATCGACAAGTCTGTTAGAAAGGATGCTTCCGAGGAGCACCCCAAATCCGCCGTCATACAAAACCAGCCACCCGCTGACATTACCAAGCCAAACAAGGAGGCAGAACAAGGAAAAGACAGCGATCTGGCCGATGCTGGTGCTGCATTAAATACGGCAGAAAAAGCACATAAAGAATCAGTGCCGAGCCCAGTGCAGTTGCCCCACCAGAAACCAGTTCTACCGGAGAAGAGCGACGGCGATCTAGAACAACAGCAAGGTGGATTGGACGGTGCTGTCGCAGGTGATGTGGCTCCATTCGATGACGAACCCAAGCAGGCGGCCGAACAGGATGCCAAAGGTGGCACTCCGCCGGTGTATGAAACTTCGGACGAATCTGAGGGCATCGCTTCCGCTGAAGACGTCAACGAAAACGGAGACGACTTGGAGCTTAACGGGTTTCAACCCGTAGGTAAGCCGGATTTGCAAGAGAAAGTAAAACCAGACGAACTGACGGACAGTTCAAAGGCGAGTGACATCGTGCCGGGTGCGGATCCATTTTACGAGCAGAAGGATTCGAACTTTTTCTCCTACTTCCTGTTTGCCATGTTCAGCTGCGCCATGCTCTACGTCGCATATCACAACAAATCGAAGCTGCT-GGCCCT-GGTCGTCGAAGGACGACGGACGAGTAGC-GGGC-GGGGTGGGTTCAGCAAGGGGCGCAAACATACGGCCGCCTATCGCAAACTGGACTCCAACCTGGAGGAAGCAATTACATCGGGCAACGGTTCTGGTGCACATTCGTCTTCACAGATCATCTACTAAAAGACACTATAGAGCCTTGCCTGCGTGTGTATCTAAAGCGCTCATTCGTTCCCTTCGTCCCCCTTCCCAGGTTGTGTGGGANGGGTTCTGTGTAAATATCTTCCATTCATCGTTCCTTACGTTTCATTCAGTAGGCGCCTTACTGAAGCGATCCCCCGAAGCCTTACTAGCCCGCCTACTCTGTCTGCACGCGGTAGCAAC]

[+] EMBL BM578254             [CCGGGCGAAAGACAAGGCCGCAATCACTCCCGGCACTGACATCGACAAGTCTGTTAGAAAGGATGCTTCCGAGGAGCACCCCAAATCCGCCGTCATACAAAACCAGCCACCCGCTGACATTACCAAGCCAAACAAGGAGGCAGAACAAGGAAAAGACAGCGATCTGGCCGATGCTGGTGCTGCATTAAATACGGCAGAAAAAGCACATAAAGAATCAGTGCCGAGCCCAGTGCAGTTGCCCCACCAGAAACCAGTTCTACCGGAGAAGAGCGACGGCGATCTAGAACAACAGCAAGGTGGATTGGACGGTGCTGTCGCAGGTGATGTGGCTCCATTCGATGACGAACCCAAGCAGGCGGCCGAACAGGATGCCAAAGGTGGCACTCCGCCGGTGTATGAAACTTCGGACGAATCTGAGGGCATCGCTTCCGCTGAAGACGTCAACGAAAACGGAGACGACTTGGAGCTTAACGGGTTTCAACCCGTAGGTAAGCCGGATTTGCAAGAGAAAGTAAAACCAGACGAACTGACGGACAGTTCAAAGGCGAGTGACATCGTGCCGGGTGCGGATCCATTTTACGAGCAGAAGGATTCGAACTTTTTCTCCTACTTCCTGTTTGCCATGTTCAGCTGC                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM578213             [                                                                                                                                                                                                                                                                    ccGAGAAGAGCGACGGCGATCTAGAACAACAGCAAGGTGGATTGGACGGTGCTGTCGCAGGTGATGTGGCTCCATTCGATGACGAACCCAAGCAGGCGGCCGAACAGGATGCCAAAGGTGGCACTCCGCCGGTGTATGAAACTTCGGACGAATCTGAGGGCATCGCTTCCGCTGAAGACGTCAACGAAAACGGAGACGACTTGGAGCTTAACGGGTTTCAACCCGTAGGTAAGCCGGATTTGCAAGAGAAAGTAAAACCAGACGAACTGACGGACAGTTCAAAGGCGAGTGACATCGTGCCGGGTGCGGATCCATTTTACGAGCAGAAGGATTCGAACTTTTTCTCCTACTTCCTGTTTGCCATGTTCAGCTGCGCCATGCTCTACGTCGCATATCACAACAAATCGAAGCTGCTGGGCCCTGGGTCGTCGAAGGACGACGGACGAGTAGCGGGGCGGGGGTGGGTTCAGCAAGGGACGCAAACATACGGCCGCCTATCGCAAACTGGACTCCAACCTGGAGGAAGCAATTACATCGGGCAAGGGTTCTGGTGCACATTCGTCTTCACAGATCATCTACTAAAAGACACTATAGAGCATTGCCTGCGTGT                                                                                                                                                                             ]
[+] EMBL BX625382             [                                                                                                                                                                                                                                                                                                             TTGGACGGTGCTGTCGCAGGTGATGTGGCTCCATTCGATGACGAACCCAAACAGGCGGCCGAACAGGATGCCAAAGGTGGCACTCCGCCGGTGTATGAAACTTCGGACGAATCTGAGGGCATCGCTTCTGCTGAAGACGTCAACGAAAACGGAGACGACTTGGAGCTTAACGGGTTTCAACCCGTGGGTAAGCCGGATTTGCAAGAGAAAGCAAAACCAGACGAACTGACGGACAGTTCAAAGGCGAGTGACATCGTGCCGGGTGCGGATCCATTTTACGAGCAGAAGGATTCGAACTTTTTCTCCTACTTCCTGTTTGCCATGTTCAGCTGCGCCATGCTCTACGTCGCATATCACAACAAATCGAAGCTGCT GGCCCT GGTCGTCGAAGGTCGACGGACGAGTAGC GGGC GGGGTGGATTCAGCAAGGGGCGCAAACATACGGCCGCCTATCGCAAACTGGACTCCAACCTGGAGGAAGCAATTACATCGGGCAACGGTTCTGGTGCACATTCGTCTTCACAGATCATCTACTAAAAGACACTATAGAGCCTTGCCTGCGTGTGTATCTAAAGCGCTCATTCGTTCCCTTCGTCCCCCTTCCCAGGTTGTGTGGGANGGGTTCTGTGTAAATATCTTCCATTCATCGTTCCTTACGTTTCATTCAGTAGGCGCCTTACTGAAGCG                                                   ]
[+] EMBL BX625362             [                                                                                                                                                                                                                                                                                                                              AGGTGATGTGGCTCCATTCGATGACGAACCCAAACAGGCGGCCGAACAGGATGCCAAAGGTGGCACTCCGCCGGTGTATGAAACTTCGGACGAATCTGAGGGCATCGCTTCTGCTGAAGACGTCAACGAAAACGGAGACGACTTGGAGCTTAACGGGTTTCAACCCGTGGGTAAGCCGGATTTGCAAGAGAAAGCAAAACCAGACGAACTGACGGACAGTTCAAAGGCGAGTGACATCGTGCCGGGTGCGGATCCATTTTACGAGCAGAAGGATTCGAACTTTTTCTCCTACTTCCTGTTTGCCATGTTCAGCTGCGCCATGCTCTACGTCGCATATCACAACAAATCGAAGCTGCT GGCCCT GGTCGTCGAAGGTCGACGGACGAGTAGC GGGC GGGGTGGATTCAGCAAGGGGCGCAAACATACGGCCGCCTATCGCAAACTGGACTCCAACCTGGAGGAAGCAATTACATCGGGCAACGGTTCTGGTGCACATTCGTCTTCACAGATCATCTACTAAAAGACACTATAGAGCCTTGCCTGCGTGTGTATCTAAAGCGCTCATTCGTTCCCTTCGTCCCCCTTCCCAGGTTGTGTGGGAGGGGTTCTGTGTAAATATCTTCCATTCATCGTTCCTTACGTTTCATTCAGTAGGCGCCTTACTGAAGCGATCCCCCGAAGCCTTACTAGCCCGCCTACTCTGTCTGCACGCGGTAGCAAC]
[+] EMBL BX613746             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              gGCGCGACGTCGCATATCACAACAAATCGAAGCGGCT GGCCCT GGTCGTCGAAGGACGACGGACGAGTAGC GGGC GGGGGGGGTCCAGCAAGGGGCGCAAACATACGGCCGCCTATCGCAAACGGGACTCCAACCTGGAAGAAGCAATAACATCGG                                                                                                                                                                                                                                                     ]


>consensus_7131#0 CCGGGCGAAAGACAAGGCCGCAATCACTCCCGGCACTGACATCGACAAGTCTGTTAGAAA GGATGCTTCCGAGGAGCACCCCAAATCCGCCGTCATACAAAACCAGCCACCCGCTGACAT TACCAAGCCAAACAAGGAGGCAGAACAAGGAAAAGACAGCGATCTGGCCGATGCTGGTGC TGCATTAAATACGGCAGAAAAAGCACATAAAGAATCAGTGCCGAGCCCAGTGCAGTTGCC CCACCAGAAACCAGTTCTACCGGAGAAGAGCGACGGCGATCTAGAACAACAGCAAGGTGG ATTGGACGGTGCTGTCGCAGGTGATGTGGCTCCATTCGATGACGAACCCAAGCAGGCGGC CGAACAGGATGCCAAAGGTGGCACTCCGCCGGTGTATGAAACTTCGGACGAATCTGAGGG CATCGCTTCCGCTGAAGACGTCAACGAAAACGGAGACGACTTGGAGCTTAACGGGTTTCA ACCCGTAGGTAAGCCGGATTTGCAAGAGAAAGTAAAACCAGACGAACTGACGGACAGTTC AAAGGCGAGTGACATCGTGCCGGGTGCGGATCCATTTTACGAGCAGAAGGATTCGAACTT TTTCTCCTACTTCCTGTTTGCCATGTTCAGCTGCGCCATGCTCTACGTCGCATATCACAA CAAATCGAAGCTGCTGGCCCTGGTCGTCGAAGGACGACGGACGAGTAGCGGGCGGGGTGG GTTCAGCAAGGGGCGCAAACATACGGCCGCCTATCGCAAACTGGACTCCAACCTGGAGGA AGCAATTACATCGGGCAACGGTTCTGGTGCACATTCGTCTTCACAGATCATCTACTAAAA GACACTATAGAGCCTTGCCTGCGTGTGTATCTAAAGCGCTCATTCGTTCCCTTCGTCCCC CTTCCCAGGTTGTGTGGGANGGGTTCTGTGTAAATATCTTCCATTCATCGTTCCTTACGT TTCATTCAGTAGGCGCCTTACTGAAGCGATCCCCCGAAGCCTTACTAGCCCGCCTACTCT GTCTGCACGCGGTAGCAAC



consensusID : consensus_7131#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 485
fasta sequence
                              [ATCCCCGAGGNCAAAACGGAGACGACTTGGAGCTTACGGGTTTCAACCCGTGGGTAAGCCGGATTTGCAAGAGAAAGCAAAACCAGACGAACTGACGGACAGTTCAAAGGCGAGTGACATCGTGCCGGGTGCGGATCCATTTTACGAGCAGAAGGATTCGAACTTTTTCTCCTACTTCCTGTTTGCCATGTTCAGCTGCGCCATGCTCTACGTCGCATATCACAACAAATCGAAGCTGCTGGCCCTGGTCGTCGAAGGACGACGGACGAGTAGCGGGCGGGGTGGGTTCAGCAAGGGGCGCAAACATACGGCCGCCTATCGCAAACTGGACTCCAACCTGGGAGGAAGCAATTACATCGGGCAACGGTTCTGGTGCACATTCGTCTTCACAGATCATCTACTAAAAGACACTATAGAGCATTGCCTGCGTGTGTATCTAAAGCGCTCATTCGTTCCCTTCGTCCCCCTTCCCAGGTTGAGTGGGA]

[+] EMBL AL932925             [ATCCCCGAGGNCAAAACGGAGACGACTTGGAGCTTACGGGTTTCAACCCGTGGGTAAGCCGGATTTGCAAGAGAAAGCAAAACCAGACGAACTGACGGACAGTTCAAAGGCGAGTGACATCGTGCCGGGTGCGGATCCATTTTACGAGCAGAAGGATTCGAACTTTTTCTCCTACTTCCTGTTTGCCATGTTCAGCTGCGCCATGCTCTACGTCGCATATCACAACAAATCGAAGCTGCTGGCCCTGGTCGTCGAAGGACGACGGACGAGTAGCGGGCGGGGTGGGTTCAGCAAGGGGCGCAAACATACGGCCGCCTATCGCAAACTGGACTCCAACCTGGGAGGAAGCAATTACATCGGGCAACGGTTCTGGTGCACATTCGTCTTCACAGATCATCTACTAAAAGACACTATAGAGCATTGCCTGCGTGTGTATCTAAAGCGCTCATTCGTTCCCTTCGTCCCCCTTCCCAGGTTGAGTGGGA]


>consensus_7131#1 ATCCCCGAGGNCAAAACGGAGACGACTTGGAGCTTACGGGTTTCAACCCGTGGGTAAGCC GGATTTGCAAGAGAAAGCAAAACCAGACGAACTGACGGACAGTTCAAAGGCGAGTGACAT CGTGCCGGGTGCGGATCCATTTTACGAGCAGAAGGATTCGAACTTTTTCTCCTACTTCCT GTTTGCCATGTTCAGCTGCGCCATGCTCTACGTCGCATATCACAACAAATCGAAGCTGCT GGCCCTGGTCGTCGAAGGACGACGGACGAGTAGCGGGCGGGGTGGGTTCAGCAAGGGGCG CAAACATACGGCCGCCTATCGCAAACTGGACTCCAACCTGGGAGGAAGCAATTACATCGG GCAACGGTTCTGGTGCACATTCGTCTTCACAGATCATCTACTAAAAGACACTATAGAGCA TTGCCTGCGTGTGTATCTAAAGCGCTCATTCGTTCCCTTCGTCCCCCTTCCCAGGTTGAG TGGGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7131#0      CCGGGCGAAAGACAAGGCCGCAATCACTCCCGGCACTGACATCGACAAGTCTGTTAGAAA 60
consensus_7131#1      ------------------------------------------------------------
                                                                                  

consensus_7131#0      GGATGCTTCCGAGGAGCACCCCAAATCCGCCGTCATACAAAACCAGCCACCCGCTGACAT 120
consensus_7131#1      ------------------------------------------------------------
                                                                                  

consensus_7131#0      TACCAAGCCAAACAAGGAGGCAGAACAAGGAAAAGACAGCGATCTGGCCGATGCTGGTGC 180
consensus_7131#1      ------------------------------------------------------------
                                                                                  

consensus_7131#0      TGCATTAAATACGGCAGAAAAAGCACATAAAGAATCAGTGCCGAGCCCAGTGCAGTTGCC 240
consensus_7131#1      ------------------------------------------------------------
                                                                                  

consensus_7131#0      CCACCAGAAACCAGTTCTACCGGAGAAGAGCGACGGCGATCTAGAACAACAGCAAGGTGG 300
consensus_7131#1      ------------------------------------------------------------
                                                                                  

consensus_7131#0      ATTGGACGGTGCTGTCGCAGGTGATGTGGCTCCATTCGATGACGAACCCAAGCAGGCGGC 360
consensus_7131#1      ------------------------------------------------------------
                                                                                  

consensus_7131#0      CGAACAGGATGCCAAAGGTGGCACTCCGCCGGTGTATGAAACTTCGGACGAATCTGAGGG 420
consensus_7131#1      ------------------------------------------------------------
                                                                                  

consensus_7131#0      CATCGCTTCCGCTGAAGACGTCAACGAAAACGGAGACGACTTGGAGCTTAACGGGTTTCA 480
consensus_7131#1      -------ATCCCCGAGGNC-------AAAACGGAGACGACTTGGAGCTTA-CGGGTTTCA 45
                               * * ** * *       ************************ *********

consensus_7131#0      ACCCGTAGGTAAGCCGGATTTGCAAGAGAAAGTAAAACCAGACGAACTGACGGACAGTTC 540
consensus_7131#1      ACCCGTGGGTAAGCCGGATTTGCAAGAGAAAGCAAAACCAGACGAACTGACGGACAGTTC 105
                      ****** ************************* ***************************

consensus_7131#0      AAAGGCGAGTGACATCGTGCCGGGTGCGGATCCATTTTACGAGCAGAAGGATTCGAACTT 600
consensus_7131#1      AAAGGCGAGTGACATCGTGCCGGGTGCGGATCCATTTTACGAGCAGAAGGATTCGAACTT 165
                      ************************************************************

consensus_7131#0      TTTCTCCTACTTCCTGTTTGCCATGTTCAGCTGCGCCATGCTCTACGTCGCATATCACAA 660
consensus_7131#1      TTTCTCCTACTTCCTGTTTGCCATGTTCAGCTGCGCCATGCTCTACGTCGCATATCACAA 225
                      ************************************************************

consensus_7131#0      CAAATCGAAGCTGCTGGCCCTGGTCGTCGAAGGACGACGGACGAGTAGCGGGCGGGGTGG 720
consensus_7131#1      CAAATCGAAGCTGCTGGCCCTGGTCGTCGAAGGACGACGGACGAGTAGCGGGCGGGGTGG 285
                      ************************************************************

consensus_7131#0      GTTCAGCAAGGGGCGCAAACATACGGCCGCCTATCGCAAACTGGACTCCAACCTGG-AGG 779
consensus_7131#1      GTTCAGCAAGGGGCGCAAACATACGGCCGCCTATCGCAAACTGGACTCCAACCTGGGAGG 345
                      ******************************************************** ***

consensus_7131#0      AAGCAATTACATCGGGCAACGGTTCTGGTGCACATTCGTCTTCACAGATCATCTACTAAA 839
consensus_7131#1      AAGCAATTACATCGGGCAACGGTTCTGGTGCACATTCGTCTTCACAGATCATCTACTAAA 405
                      ************************************************************

consensus_7131#0      AGACACTATAGAGCCTTGCCTGCGTGTGTATCTAAAGCGCTCATTCGTTCCCTTCGTCCC 899
consensus_7131#1      AGACACTATAGAGCATTGCCTGCGTGTGTATCTAAAGCGCTCATTCGTTCCCTTCGTCCC 465
                      ************** *********************************************

consensus_7131#0      CCTTCCCAGGTTGTGTGGGANGGGTTCTGTGTAAATATCTTCCATTCATCGTTCCTTACG 959
consensus_7131#1      CCTTCCCAGGTTGAGTGGGA---------------------------------------- 485
                      ************* ******                                        

consensus_7131#0      TTTCATTCAGTAGGCGCCTTACTGAAGCGATCCCCCGAAGCCTTACTAGCCCGCCTACTC 1019
consensus_7131#1      ------------------------------------------------------------
                                                                                  

consensus_7131#0      TGTCTGCACGCGGTAGCAAC 1039
consensus_7131#1      --------------------
                                          




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)