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Anopheles gambiae
cluster # 7220 cluster # 7220       Sequences # 7       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7220#0 length = 1213 sequences # 4  
consensus_7220#1 length = 764 sequences # 1  
consensus_7220#2 length = 618 sequences # 1  
consensus_7220#3 length = 412 sequences # 1  

consensusID : consensus_7220#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1213
fasta sequence
                              [CTTTCGCCCAGTTCTAACAGTGACGTGAGCACGGTATCCCAAGATTCACGCACGGCAGCAGAGGGCAATCCACTTGTGGGGTGAGGTTGTTTGCGTCGTCACCATTTCTCTCTCTCTCTCTCTCTCTCTCGCCCTGGTGTCGGTGACTGCACCCGGTCTCTCCGAGCCGGATTATCGCGCACGCCGACGGGCCGTTACGTTGATCATGCCCCGACCGGGCCAGTACGCAGCAAGCGCTTGACCGCCTCAAACGAGTTTCCCGACATAACTCCCTCCTCGA----GTGTGTGTGTGTGCGTACGTGCGTTTGTGCAGAGCAGCTTGATCGCATCGGAGTGTATCGTATCGCGGGGATTCAATCGGAGAGGTCCCAATCCCATCCGACGCACGTTGCCGCAGTCATTCGCCAGTTCCCGGCCGGAGGAGAACAATCGACCGTCCTGGAGTGGGTTTCGACTGAACGGGCGCGCGCGCGTGTGTTTGTGTGGTAGTGTGTGGGCTTAAGGGCTCTTCCAACGGTGCTTTAACCCACGGCAGCAGCAGCAGCAGCAGC---AACATGGAGCGCCCACTGCGGCGGTACGTGAAAGCCCACGGGTACGCGATCGCCATCTCTGCCCTATTTTTCGGCTGCATCTTTGTCGCCAGTATTCTCAACGAAGATCAGCTGAGCCGTTCAGCAAGCGAATACGCTTTCTTTCGTTCGAGGCCGCTCGAGCAGCTCATCTTCTCGATTGCGTGGATCG-CGGCAGGGCTGATCTTCCTGCTCGGGCTGATCTGTGAACGGAAGGAGGCCATCTTTCCGTTCGCCACCATCTTTCTGGTCGAATGGAGCCT-GGGGCTGGTGCAGCTGGTCAGCAAGCTCGAGCATCGCGACCTGGTTGAGGTGGTCCTGTCGGCCGAGGCAGCCGTGTTTCTACTGGTGCCGTTGTACGTGGGATACACGCTGGTCATACTGTACCGGGCGTTCGACAGCCAGTACAAGGACGAGGCGGTGGAGGACATCGAGCAGGCACGCAGGCCGGTGAAGTTCTTTTTCGGCGAAGATCCGGACGACACTTACAGCTAGAGAGAGAGAGAGAGAGAGAAAGAGGACGAGAGAAAGCGATTGTTACTGTTAAGTTACAGCGATAAGATTTAGGACCTACTTTTATTTATACACGAGTATTTTAAGTGTGATTTTGAAACATGCAAAAAAAAAAATCCCCCCGTGACATTA]

[+] EMBL CNS09NUM             [CTTTCGCCCAGTTCTAACAGTGACGTGAGCACGGTATCCCAAGATTCACGCACGGCAGCAGAGGGCAATCCACTTGTGGGGTGAGGTTGTTTGCGTCGTCACCATTTCTCTCTCTCTCTCTCTCTCTCTCGCCCTGGTGTCGGTGACTGCACCCGGTCTCTCCGAGCCGGATTATCGCGCACGCCGACGGGCCGTTACGTTGATCATGCCCCGACCGGGCCAGTACGCAGCAAGCGCTTGACCGCCTCAAACGAGTTTCCCGACATAACTCCCCCCTTGAGTGTGTGTGTGTGTGTGCTTACGTGCGTTTGTGCAGAGCAGCTTGATCGCATCGGAGTGTATCGTATCGCGGGGATTCAATCGGAGAGGTCCCAATCCCATCCGACGCACGTTGCCGCAGTCATTCGCCAGTTCCCAGCCGGAGGAGAACAATCGACCGTCCTGGAGTGGGTTTCGACTGAACGGGCGCGCGCGCGTGTGTTTGTGTGGTAGTGTGTGGGCTTAATGGCTCTTCCAACGGTGCTTTAACCCACGGCAGCAGCAGCAGCAGCAGC   AACATGGAGCGCCCACTGCGGCGGTACGTGAAAGCCCACGGGTACGCGATCGCCATCTCTGCCCTATTTTTCGGCTGCATCTTTGTCGCCAGTATTCTCAACGAAGATCAGCTGAGCCGTTCAGCAAGCGAATACGCTTTCTTTCGTTCGAGGCCGCTCGAGCAGCTCATCTTCTCGATTGCGTGGATCG CGGCAGGGCTGATCTTCCTGCTCGGGCTGATCTGTGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM592972             [                                                                                                                                                                                                                                                 CCG CTCAAACGAGTTTCCCGACATAACTCCCTCCTCGA    GTGTGTGTGTGTGCGTACGTGCGTTTGTGCAGAGCAGCTTGATCGCATCGGAGTGTATCGTATCGCGGGGATTCAATCGGAGAGGTCCCAATCCCATCCGACGCACGTTGCCGCAGTCATTCGCCAGTTCCCGGCCGGAGGAGAACAATCGACCGTCCTGGAGTGGGTTTCGACTGAACGGGCGCGCGCGCGTGTGTTTGTGTGGTAGTGTGTGGGCTTAAGGGCTCTTCCAACGGTGCTTTAACCCACGGCAGCAGCAGCAGCAGCAGCAGTAACATGGAGCGCCCACTGCGGCGGTACGTGAAAGCCCACGGGTACGCGATCGCCATCTCTGCCCTATTTTTCGGCTGCATCTTTGTCGCCAGTATTCTCAACGAAGATCAGCTGAGCCGTTCAGCAAGCGAATACGCTTTCTTTCGCTCGAGGCCGCTCGAGCAGCTCATCTTCTCGATTGCGTGGATCG CGGCAGGGCTGATCTTCCTGCTCGGGCTGATCTGTGAACGGAAGGAGGCCATCTTTCCGTTCGCCACCATCTTTCTGGGCCAATGGAACCTGGGGGCTGGTGCAGCTGGTCAGCAAGCTCGAGCATCGCGACCTGGTT                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM589662             [                                                                                                                                                                                                                                                      ccgAACGAGTTTCCCGACATAACTCCCTCCTCGA    GTGTGTGTGTGTGCGTACGTGCGTTTGTGCAGAGCAGCTTGATCGCATCGGAGTGTATCGTATCGCGGGGATTCAATCGGAGAGGTCCCAATCCCATCCGACGCACGTTGCCGCAGTCATTCGCCAGTTCCCGGCCGGAGGAGAACAATCGACCGTCCTGGAGTGGGTTTCGACTGAACGGGCGCGCGCGCGTGTGTTTGTGTGGTAGTGTGTGGGCTTAAGGGCTCTTCCAACGGTGCTTTAACCCACGGCAGCAGCAGCAGCAGCAGCAGTAACATGGAGCGCCCACTGCGGCGGTACGTGAAAGCCCACGGGTACGCGATCGCCATCTCTGCCCTATTTTTCGGCTGCATCTTTGTCGCCAGTATTCTCAACGAAGATCAGCTGAGCCGTTCAGCAAGCGAATACGCTTTCTTTCGCTCGAGGCCGCTCGAGCAGCTCATCTTCTCGATTGCGTGGATCGCCGGCAGGGCTGATCTTCCTGCTCGGGCTGATCTGTGAACGGAAGGAGGCCATCTTTCCGTTCGCCACCATCTTTCTGGTCGAATGGAGCC                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CNS09NUN             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TCCAACGGTGCTTTAACCCACGGCAGCAGCAGCAGCAGCAGC   AACATGGAGCGCCCACTGCGGCGGTACGTGAAAGCCCACGGGTACGCGATCGCCATCTCTGCCCTATTTTTCGGCTGCATCTTTGTCGCCAGTATTCTCAACGAAGATCAGCTGAGCCGTTCAGCAAGCGAATACGCTTTCTTTCGTTCGAGGCCGCTCGAGCAGCTCATCTTCTCGATTGCGTGGATCG CGGCAGGGCTGATCTTCCTGCTCGGGCTGATCTGTGAACGGAAGGAGGCCATCTTTCCATTTGCCACCATCTTTCTGGTCGAATGGAGCCT GGTGCTGGTGCAGCTGGTCAGCAAGCTCGAGCATCGCGACCTGGTTGAGGTGGTCCTGTCGGCCGAGGCAGCCGTGTTTCTACTGGTGCCGTTGTACGTGGGATACACGCTGGTCATACTGTACCGGGCGTTCGACAGCCAGTACAAGGACGAGGCGGTGGAGGACATCGAGCAGGCACGCAGGCCGGTGAAGTTCTTTTTCGGCGAAGATCCGGACGACACTTACAGCTAGAGAGAGAGAGAGAGAGAGAAAGAGGACGAGAGAAAGCGATTGTTACTGTTAAGTTACAGCGATAAGATTTAGGACCTACTTTTATTTATACACGAGTATTTTAAGTGTGATTTTGAAACATGCAAAAAAAAAAATCCCCCCGTGACATTA]


>consensus_7220#0 CTTTCGCCCAGTTCTAACAGTGACGTGAGCACGGTATCCCAAGATTCACGCACGGCAGCA GAGGGCAATCCACTTGTGGGGTGAGGTTGTTTGCGTCGTCACCATTTCTCTCTCTCTCTC TCTCTCTCTCGCCCTGGTGTCGGTGACTGCACCCGGTCTCTCCGAGCCGGATTATCGCGC ACGCCGACGGGCCGTTACGTTGATCATGCCCCGACCGGGCCAGTACGCAGCAAGCGCTTG ACCGCCTCAAACGAGTTTCCCGACATAACTCCCTCCTCGAGTGTGTGTGTGTGCGTACGT GCGTTTGTGCAGAGCAGCTTGATCGCATCGGAGTGTATCGTATCGCGGGGATTCAATCGG AGAGGTCCCAATCCCATCCGACGCACGTTGCCGCAGTCATTCGCCAGTTCCCGGCCGGAG GAGAACAATCGACCGTCCTGGAGTGGGTTTCGACTGAACGGGCGCGCGCGCGTGTGTTTG TGTGGTAGTGTGTGGGCTTAAGGGCTCTTCCAACGGTGCTTTAACCCACGGCAGCAGCAG CAGCAGCAGCAACATGGAGCGCCCACTGCGGCGGTACGTGAAAGCCCACGGGTACGCGAT CGCCATCTCTGCCCTATTTTTCGGCTGCATCTTTGTCGCCAGTATTCTCAACGAAGATCA GCTGAGCCGTTCAGCAAGCGAATACGCTTTCTTTCGTTCGAGGCCGCTCGAGCAGCTCAT CTTCTCGATTGCGTGGATCGCGGCAGGGCTGATCTTCCTGCTCGGGCTGATCTGTGAACG GAAGGAGGCCATCTTTCCGTTCGCCACCATCTTTCTGGTCGAATGGAGCCTGGGGCTGGT GCAGCTGGTCAGCAAGCTCGAGCATCGCGACCTGGTTGAGGTGGTCCTGTCGGCCGAGGC AGCCGTGTTTCTACTGGTGCCGTTGTACGTGGGATACACGCTGGTCATACTGTACCGGGC GTTCGACAGCCAGTACAAGGACGAGGCGGTGGAGGACATCGAGCAGGCACGCAGGCCGGT GAAGTTCTTTTTCGGCGAAGATCCGGACGACACTTACAGCTAGAGAGAGAGAGAGAGAGA GAAAGAGGACGAGAGAAAGCGATTGTTACTGTTAAGTTACAGCGATAAGATTTAGGACCT ACTTTTATTTATACACGAGTATTTTAAGTGTGATTTTGAAACATGCAAAAAAAAAAATCC CCCCGTGACATTA



consensusID : consensus_7220#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 764
fasta sequence
                              [CCCGCGGTANCGTCTGGAGTGGGTTTCCACTGAATTGCGCNNGCGCGTGTGTTTGTGTGGTAGTGTGTGGGCTTAAGGGCTCTTCCAACGGTGCTTTAACCCACGGCAGCAGCAGCAGTAACATGGAGCGCCCACTGCGACGGTACGTGAAAGCCCACGGGTACGCGATCGCCATCTCTGCCCTATTATATTCGGCTGCATCTTTGTCGCCAGTATTCTCAACTAAGATCAGTGAGCCGTTCAGCAAGCGAATACGCTTTCTTTCGTTCGAGGCCGCTCGAGCAGCTCATCTTCTCGATTGCGTGGATCGCGGCCAGGGCTGATCTTCCTGCTCGGGCTGATCTGTGAACGGAAGGAGGCCATCTTTCCATTTGCCACCATCTTTCTAGGTCGAATGGAGCCTGTGCTGGTGCAGCTGGTCAGAAGCTCGAGCATCGCGACCTGTTGAGGTAGGTCCTGTCGGCCGAGGCAGACTTGTTCTACTGGTGCCATATGTACGTGGGATACACGCTGGTCATATTGTACCGGGCGTCGACAGNCAGTACCAAGGACGAAGCAGGTGGGAAGGGAACATCGAGACANGGACGCAAGGCGGTGAAAGGTACTNNTTACGAGGGAACGAATCCGGGAAGGAAATTTACAGTAGGAGAAGAGAGAAAGAGGACGAAGAGAAAAGCGATTGGTTACTGTTAAGGCTTAAGGGAATAAGATTAGGAGACGTAATTATTATTTATTACACCGAAGTATTATAAGTGTATTTTGAA]

[+] EMBL AL693009             [CCCGCGGTANCGTCTGGAGTGGGTTTCCACTGAATTGCGCNNGCGCGTGTGTTTGTGTGGTAGTGTGTGGGCTTAAGGGCTCTTCCAACGGTGCTTTAACCCACGGCAGCAGCAGCAGTAACATGGAGCGCCCACTGCGACGGTACGTGAAAGCCCACGGGTACGCGATCGCCATCTCTGCCCTATTATATTCGGCTGCATCTTTGTCGCCAGTATTCTCAACTAAGATCAGTGAGCCGTTCAGCAAGCGAATACGCTTTCTTTCGTTCGAGGCCGCTCGAGCAGCTCATCTTCTCGATTGCGTGGATCGCGGCCAGGGCTGATCTTCCTGCTCGGGCTGATCTGTGAACGGAAGGAGGCCATCTTTCCATTTGCCACCATCTTTCTAGGTCGAATGGAGCCTGTGCTGGTGCAGCTGGTCAGAAGCTCGAGCATCGCGACCTGTTGAGGTAGGTCCTGTCGGCCGAGGCAGACTTGTTCTACTGGTGCCATATGTACGTGGGATACACGCTGGTCATATTGTACCGGGCGTCGACAGNCAGTACCAAGGACGAAGCAGGTGGGAAGGGAACATCGAGACANGGACGCAAGGCGGTGAAAGGTACTNNTTACGAGGGAACGAATCCGGGAAGGAAATTTACAGTAGGAGAAGAGAGAAAGAGGACGAAGAGAAAAGCGATTGGTTACTGTTAAGGCTTAAGGGAATAAGATTAGGAGACGTAATTATTATTTATTACACCGAAGTATTATAAGTGTATTTTGAA]


>consensus_7220#1 CCCGCGGTANCGTCTGGAGTGGGTTTCCACTGAATTGCGCNNGCGCGTGTGTTTGTGTGG TAGTGTGTGGGCTTAAGGGCTCTTCCAACGGTGCTTTAACCCACGGCAGCAGCAGCAGTA ACATGGAGCGCCCACTGCGACGGTACGTGAAAGCCCACGGGTACGCGATCGCCATCTCTG CCCTATTATATTCGGCTGCATCTTTGTCGCCAGTATTCTCAACTAAGATCAGTGAGCCGT TCAGCAAGCGAATACGCTTTCTTTCGTTCGAGGCCGCTCGAGCAGCTCATCTTCTCGATT GCGTGGATCGCGGCCAGGGCTGATCTTCCTGCTCGGGCTGATCTGTGAACGGAAGGAGGC CATCTTTCCATTTGCCACCATCTTTCTAGGTCGAATGGAGCCTGTGCTGGTGCAGCTGGT CAGAAGCTCGAGCATCGCGACCTGTTGAGGTAGGTCCTGTCGGCCGAGGCAGACTTGTTC TACTGGTGCCATATGTACGTGGGATACACGCTGGTCATATTGTACCGGGCGTCGACAGNC AGTACCAAGGACGAAGCAGGTGGGAAGGGAACATCGAGACANGGACGCAAGGCGGTGAAA GGTACTNNTTACGAGGGAACGAATCCGGGAAGGAAATTTACAGTAGGAGAAGAGAGAAAG AGGACGAAGAGAAAAGCGATTGGTTACTGTTAAGGCTTAAGGGAATAAGATTAGGAGACG TAATTATTATTTATTACACCGAAGTATTATAAGTGTATTTTGAA



consensusID : consensus_7220#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 618
fasta sequence
                              [GCAAGAATCGCACGAGGTNGTAGCTTGATCGCATCGGAGTGTCNCTCGTATNGNGGGGATTCAATCGGAGAGGTCCCAATCCCATCCGACGCACGTTGCCGCAGTCATTCGCCAGTTCCCAGCCGGAGGAGAACAATCGACCGTCCTGGAGTGGGTTTCGACTGAACGGGCGCGCGCGCGTGTGTATGTGTGGTAGTGTGTGGGCTTAAGGGCTCTTCCAACGGTGCTTTAACCCACGGCAGCAGCAGCAGTAACATGGAGCGCCCACTGCGACGGTACGTGAAAGCCCACGGGTACGCGATCGCCATCTCTGCCCTATTTTTCGGCTGCATCTTTGTCGCCAGTATTCTACAACGAAGATCAGCTGAGCCGTTCAGCAAGCGAATACGCTTTCTTTACGTTACGAGGCCGCTCGAGCAGACTCATCTTCTCGATTGCAGTGGATCGCNGGNAGAGGCTGATCTTCCTGCTCGGGCTGATCTGTGAACGGAACGGAGGCCATCTTNGCCATTTGCGACAANCATACTTTACTGGNTCGAATGGAGGCCTGGATGCTGGTGCAAGCTGGTCAGNCAAAGCTCGGAGGCNATCGAGACACTTGGNTTGAANGAGTGGTCC]

[+] EMBL BX467261             [GCAAGAATCGCACGAGGTNGTAGCTTGATCGCATCGGAGTGTCNCTCGTATNGNGGGGATTCAATCGGAGAGGTCCCAATCCCATCCGACGCACGTTGCCGCAGTCATTCGCCAGTTCCCAGCCGGAGGAGAACAATCGACCGTCCTGGAGTGGGTTTCGACTGAACGGGCGCGCGCGCGTGTGTATGTGTGGTAGTGTGTGGGCTTAAGGGCTCTTCCAACGGTGCTTTAACCCACGGCAGCAGCAGCAGTAACATGGAGCGCCCACTGCGACGGTACGTGAAAGCCCACGGGTACGCGATCGCCATCTCTGCCCTATTTTTCGGCTGCATCTTTGTCGCCAGTATTCTACAACGAAGATCAGCTGAGCCGTTCAGCAAGCGAATACGCTTTCTTTACGTTACGAGGCCGCTCGAGCAGACTCATCTTCTCGATTGCAGTGGATCGCNGGNAGAGGCTGATCTTCCTGCTCGGGCTGATCTGTGAACGGAACGGAGGCCATCTTNGCCATTTGCGACAANCATACTTTACTGGNTCGAATGGAGGCCTGGATGCTGGTGCAAGCTGGTCAGNCAAAGCTCGGAGGCNATCGAGACACTTGGNTTGAANGAGTGGTCC]


>consensus_7220#2 GCAAGAATCGCACGAGGTNGTAGCTTGATCGCATCGGAGTGTCNCTCGTATNGNGGGGAT TCAATCGGAGAGGTCCCAATCCCATCCGACGCACGTTGCCGCAGTCATTCGCCAGTTCCC AGCCGGAGGAGAACAATCGACCGTCCTGGAGTGGGTTTCGACTGAACGGGCGCGCGCGCG TGTGTATGTGTGGTAGTGTGTGGGCTTAAGGGCTCTTCCAACGGTGCTTTAACCCACGGC AGCAGCAGCAGTAACATGGAGCGCCCACTGCGACGGTACGTGAAAGCCCACGGGTACGCG ATCGCCATCTCTGCCCTATTTTTCGGCTGCATCTTTGTCGCCAGTATTCTACAACGAAGA TCAGCTGAGCCGTTCAGCAAGCGAATACGCTTTCTTTACGTTACGAGGCCGCTCGAGCAG ACTCATCTTCTCGATTGCAGTGGATCGCNGGNAGAGGCTGATCTTCCTGCTCGGGCTGAT CTGTGAACGGAACGGAGGCCATCTTNGCCATTTGCGACAANCATACTTTACTGGNTCGAA TGGAGGCCTGGATGCTGGTGCAAGCTGGTCAGNCAAAGCTCGGAGGCNATCGAGACACTT GGNTTGAANGAGTGGTCC



consensusID : consensus_7220#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 412
fasta sequence
                              [TCCCGAGGTTGACGCACGTTGCGCAGTCATTCGCCAGTTCCCAGCCTGGAGGAGAACAATCGACCGTCCTGGAGTGGGTTTCGACTGAACGGGCGCGCGCGCGTGTGTTTGTGTGGTAGTGTGTGGGCTTAAGGGCTCTTCCAACGGGTGCTTTAACCCACGGCAGCAGCAGCAGCAGCAGTAACATGGAGCGCCCACTGCGACGGTACGTGAAAGCCCACGGGTACGCGATCGCCATCTCTGCCCTATTTTTCGGCTGCATCTTTGTCGCCAGTATTCTCAACGAAGATCAGCTGAGCCGTTCAGCAAGCAAATACGCTTTCTTTCGTTCGAGGCCGCTCGAGCAGCTCATCTTCTCGATTGCGTGGATCGCGGCAGGGCTGATCTTCCTGCTCGGGCTGATCTGTGAACG]

[+] EMBL AL930869             [TCCCGAGGTTGACGCACGTTGCGCAGTCATTCGCCAGTTCCCAGCCTGGAGGAGAACAATCGACCGTCCTGGAGTGGGTTTCGACTGAACGGGCGCGCGCGCGTGTGTTTGTGTGGTAGTGTGTGGGCTTAAGGGCTCTTCCAACGGGTGCTTTAACCCACGGCAGCAGCAGCAGCAGCAGTAACATGGAGCGCCCACTGCGACGGTACGTGAAAGCCCACGGGTACGCGATCGCCATCTCTGCCCTATTTTTCGGCTGCATCTTTGTCGCCAGTATTCTCAACGAAGATCAGCTGAGCCGTTCAGCAAGCAAATACGCTTTCTTTCGTTCGAGGCCGCTCGAGCAGCTCATCTTCTCGATTGCGTGGATCGCGGCAGGGCTGATCTTCCTGCTCGGGCTGATCTGTGAACG]


>consensus_7220#3 TCCCGAGGTTGACGCACGTTGCGCAGTCATTCGCCAGTTCCCAGCCTGGAGGAGAACAAT CGACCGTCCTGGAGTGGGTTTCGACTGAACGGGCGCGCGCGCGTGTGTTTGTGTGGTAGT GTGTGGGCTTAAGGGCTCTTCCAACGGGTGCTTTAACCCACGGCAGCAGCAGCAGCAGCA GTAACATGGAGCGCCCACTGCGACGGTACGTGAAAGCCCACGGGTACGCGATCGCCATCT CTGCCCTATTTTTCGGCTGCATCTTTGTCGCCAGTATTCTCAACGAAGATCAGCTGAGCC GTTCAGCAAGCAAATACGCTTTCTTTCGTTCGAGGCCGCTCGAGCAGCTCATCTTCTCGA TTGCGTGGATCGCGGCAGGGCTGATCTTCCTGCTCGGGCTGATCTGTGAACG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7220#2      ------------------------------------------------------------
consensus_7220#3      ------------------------------------------------------------
consensus_7220#0      CTTTCGCCCAGTTCTAACAGTGACGTGAGCACGGTATCCCAAGATTCACGCACGGCAGCA 60
consensus_7220#1      ------------------------------------------------------------
                                                                                  

consensus_7220#2      ------------------------------------------------------------
consensus_7220#3      ------------------------------------------------------------
consensus_7220#0      GAGGGCAATCCACTTGTGGGGTGAGGTTGTTTGCGTCGTCACCATTTCTCTCTCTCTCTC 120
consensus_7220#1      ------------------------------------------------------------
                                                                                  

consensus_7220#2      ------------------------------------------------------------
consensus_7220#3      ------------------------------------------------------------
consensus_7220#0      TCTCTCTCTCGCCCTGGTGTCGGTGACTGCACCCGGTCTCTCCGAGCCGGATTATCGCGC 180
consensus_7220#1      ------------------------------------------------------------
                                                                                  

consensus_7220#2      ------------------------------------------------------------
consensus_7220#3      ------------------------------------------------------------
consensus_7220#0      ACGCCGACGGGCCGTTACGTTGATCATGCCCCGACCGGGCCAGTACGCAGCAAGCGCTTG 240
consensus_7220#1      ------------------------------------------------------------
                                                                                  

consensus_7220#2      ------------------------------------------------------GCAAGA 6
consensus_7220#3      ------------------------------------------------------------
consensus_7220#0      ACCGCCTCAAACGAGTTTCCCGACATAACTCCCTCCTCGAGTGTGTGTGTGTGCGTACGT 300
consensus_7220#1      ------------------------------------------------------------
                                                                                  

consensus_7220#2      ATCGCACGAGGTNGTAGCTTGATCGCATCGGAGTGTCNCTCGTATNGNGGGGATTCAATC 66
consensus_7220#3      ------------------------------------------------------------
consensus_7220#0      GCGTTTGTGCAGAGCAGCTTGATCGCATCGGAGTGTATC--GTATCGCGGGGATTCAATC 358
consensus_7220#1      ------------------------------------------------------------
                                                                                  

consensus_7220#2      GGAGAGGTCCCAATCCCATCCGACGCACGTTGCCGCAGTCATTCGCCAGTTCCCAGCC-G 125
consensus_7220#3      -------TCCCGA----GGTTGACGCACGTTGC-GCAGTCATTCGCCAGTTCCCAGCCTG 48
consensus_7220#0      GGAGAGGTCCCAATCCCATCCGACGCACGTTGCCGCAGTCATTCGCCAGTTCCCGGCC-G 417
consensus_7220#1      ------------------------------------------------------------
                                                                                  

consensus_7220#2      GAGGAGAACAATCGACCGTCCTGGAGTGGGTTTCGACTGAACGGGCGCGCGCGCGTGTGT 185
consensus_7220#3      GAGGAGAACAATCGACCGTCCTGGAGTGGGTTTCGACTGAACGGGCGCGCGCGCGTGTGT 108
consensus_7220#0      GAGGAGAACAATCGACCGTCCTGGAGTGGGTTTCGACTGAACGGGCGCGCGCGCGTGTGT 477
consensus_7220#1      ------CCCGCGGTANCGTC-TGGAGTGGGTTTCCACTGAATTG-CGCNNGCGCGTGTGT 52
                              *     * **** ************* ******  * ***  **********

consensus_7220#2      ATGTGTGGTAGTGTGTGGGCTTAAGGGCTCTTCCAACGG-TGCTTTAACCCACGGCAGCA 244
consensus_7220#3      TTGTGTGGTAGTGTGTGGGCTTAAGGGCTCTTCCAACGGGTGCTTTAACCCACGGCAGCA 168
consensus_7220#0      TTGTGTGGTAGTGTGTGGGCTTAAGGGCTCTTCCAACGG-TGCTTTAACCCACGGCAGCA 536
consensus_7220#1      TTGTGTGGTAGTGTGTGGGCTTAAGGGCTCTTCCAACGG-TGCTTTAACCCACGGCAGCA 111
                       ************************************** ********************

consensus_7220#2      GCAGCA------GTAACATGGAGCGCCCACTGCGACGGTACGTGAAAGCCCACGGGTACG 298
consensus_7220#3      GCAGCAGCAGCAGTAACATGGAGCGCCCACTGCGACGGTACGTGAAAGCCCACGGGTACG 228
consensus_7220#0      GCAGCAGCAGCAGCAACATGGAGCGCCCACTGCGGCGGTACGTGAAAGCCCACGGGTACG 596
consensus_7220#1      GCAGCA------GTAACATGGAGCGCCCACTGCGACGGTACGTGAAAGCCCACGGGTACG 165
                      ******      * ******************** *************************

consensus_7220#2      CGATCGCCATCTCTGCCCTATTTT--TCGGCTGCATCTTTGTCGCCAGTATTCTACAACG 356
consensus_7220#3      CGATCGCCATCTCTGCCCTATTTT--TCGGCTGCATCTTTGTCGCCAGTATTCT-CAACG 285
consensus_7220#0      CGATCGCCATCTCTGCCCTATTTT--TCGGCTGCATCTTTGTCGCCAGTATTCT-CAACG 653
consensus_7220#1      CGATCGCCATCTCTGCCCTATTATATTCGGCTGCATCTTTGTCGCCAGTATTCT-CAACT 224
                      ********************** *  **************************** **** 

consensus_7220#2      AAGATCAGCTGAGCCGTTCAGCAAGCGAATACGCTTTCTTTACGTTACGAGGCCGCTCGA 416
consensus_7220#3      AAGATCAGCTGAGCCGTTCAGCAAGCAAATACGCTTTCTTT-CGTT-CGAGGCCGCTCGA 343
consensus_7220#0      AAGATCAGCTGAGCCGTTCAGCAAGCGAATACGCTTTCTTT-CGTT-CGAGGCCGCTCGA 711
consensus_7220#1      AAGATCAG-TGAGCCGTTCAGCAAGCGAATACGCTTTCTTT-CGTT-CGAGGCCGCTCGA 281
                      ******** ***************** ************** **** *************

consensus_7220#2      GCAGACTCATCTTCTCGATTGCAGTGGATCGCNGGNAGAGGCTGATCTTCCTGCTCGGGC 476
consensus_7220#3      GCAG-CTCATCTTCTCGATTGC-GTGGATCGCGGCAGG--GCTGATCTTCCTGCTCGGGC 399
consensus_7220#0      GCAG-CTCATCTTCTCGATTGC-GTGGATCGCGGCAGG--GCTGATCTTCCTGCTCGGGC 767
consensus_7220#1      GCAG-CTCATCTTCTCGATTGC-GTGGATCGCGGCCAG-GGCTGATCTTCCTGCTCGGGC 338
                      **** ***************** ********* *   *  ********************

consensus_7220#2      TGATCTGTGAACGGAACGGAGGCCATCTTNGCCATTTGCGACAANCATACTTTACTGGNT 536
consensus_7220#3      TGATCTGTGAACG----------------------------------------------- 412
consensus_7220#0      TGATCTGTGAACGGAA-GGAGGCCATCTTT-CCGTTCGCCACCATCTTTCT------GGT 819
consensus_7220#1      TGATCTGTGAACGGAA-GGAGGCCATCTTT-CCATTTGCCACCATCTTTCT-----AGGT 391
                      *************                                               

consensus_7220#2      CGAATGGAGGCCTGGATGCTGGTGCAAGCTGGTCAGNCAAAGCTCGGAGGCNATCGAGAC 596
consensus_7220#3      ------------------------------------------------------------
consensus_7220#0      CGAATGGAG-CCTGGG-GCTGGTGCA-GCTGGTCAGC--AAGCTCGAGCATCG-CGACCT 873
consensus_7220#1      CGAATGGAG-CCTG--TGCTGGTGCA-GCTGGTCAGA---AGCTCGAGCATCG-CGACCT 443
                                                                                  

consensus_7220#2      ACTTGGNTTGAANGAGTGGTCC-------------------------------------- 618
consensus_7220#3      ------------------------------------------------------------
consensus_7220#0      GGTTGAGGTGGTCCTGTCGGCCGAGGCAGCCGTGTTTCTACTGGTGCCGTTGTACGTGGG 933
consensus_7220#1      GTTGAGGTAGGTCCTGTCGGCCGAGGCAGACTTGTTCTACTGGTGCCATATGTACGTGGG 503
                                                                                  

consensus_7220#2      ------------------------------------------------------------
consensus_7220#3      ------------------------------------------------------------
consensus_7220#0      ATACACGCTGGTCATACTGTACCGGGCGTTCGACAGCCAGTACAAGGACGAGGCGGTGGA 993
consensus_7220#1      ATACACGCTGGTCATATTGTACCGGGCGTCGACAGNCAGTACCAAGGACGAAGCAGGTGG 563
                                                                                  

consensus_7220#2      ------------------------------------------------------------
consensus_7220#3      ------------------------------------------------------------
consensus_7220#0      GGACATCGAGCAGGCACGCAGGCCGGTGAAGTTCTTTTTCGGCGAAGATCCGGACGACAC 1053
consensus_7220#1      GAAGGGAACATCGAGACANGGACGCAAGGCGGTGAAAGGTACTNNTTACGAGGGAACGAA 623
                                                                                  

consensus_7220#2      ------------------------------------------------------------
consensus_7220#3      ------------------------------------------------------------
consensus_7220#0      TTACAGCTAGAGAGAGAGAGAGAGAGAGAAAGAGGACGAGAGAAAGCGATTGTTACTGTT 1113
consensus_7220#1      TCCGGGAAGGAAATTTACAGTAGGAGAAGAGAGAAAGAGGACGAAGAGAAAAGCGATTGG 683
                                                                                  

consensus_7220#2      ------------------------------------------------------------
consensus_7220#3      ------------------------------------------------------------
consensus_7220#0      AAGTTACAGCGATAAGATTTAGGACCTACTTTTATTTATACACGAGTATTTTAAGTGTGA 1173
consensus_7220#1      TTACTGTTAAGGCTTAAGGGAATAAGATTAGGAGACGTAATTATTATTTATTACACCGAA 743
                                                                                  

consensus_7220#2      ----------------------------------------
consensus_7220#3      ----------------------------------------
consensus_7220#0      TTTTGAAACATGCAAAAAAAAAAATCCCCCCGTGACATTA 1213
consensus_7220#1      GTATTATAAGTGTATTTTGAA------------------- 764
                                                              




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)