Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 7343 cluster # 7343       Sequences # 7       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7343#0 length = 1027 sequences # 7  

consensusID : consensus_7343#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1027
fasta sequence
                              [CCGCCCACGCGTCCGGGCGTGCGGTAGTGCACGGTCAGTCCTGCCGGGAAAGACTCGCTCGCTCGTTCGCTCGCTGATCTCGCCGTGTTCGTCCAATTCTTCTACACTC-GTCC-ATCATGGTGTCTGCCGGGGAGTATCTACGGACGCTGGTAGTGCTGGCCGCCATCAGCTCGCTACGGTTAGTCGGCGGTGCGCCGATGCGTGGAATCAGTGATGGCGGAGGATGTAGGCGGAGTGCAGCGACAGAACTGCCCGCGTGCATCGGTACTTCGATTCAGCACTTTGTCAACTTTCTGTCCAGT-GGGAAGCTGTCGCCGCGCCACACAATCACCCCGTTCGATCCGCTGCTACTGCCCAATATGACCTTTGGGCAGGCCGTCTACGTGAACCGATACCTCGTAGGGTTGAAGAATGCTTTCATCCAGAATGTGAGAGTGGACATGGAAAAGCTAGAGTTTAACGTGACGGCCCTGATGCCCGCGCTCGAGATGCTGGGCATGTTCTCGATGGAAACGGTCAACGATCGGCACTCGGTGACGGATCACTCCATCCTTACCTTCTCCATTCGCAACACAGCGGTAACGTTTGTCGGGGAGGGGCACCCTGTACACCGCAACCAGTGGGACTAGTGGCACGGTGGGCAAGTATCTACGGCTACACCTTACCATCCCACAGATGGTGATCGGTGGCAGCAGTCTGGCGGACAGTGATCGTCACTTA-CGGACGCCAGCCGGACGGTTGCCGCGGCCAAGCTGAAACGCCTGATCGAGAAGGACTTCGGCTGCAGCTGGCCAAGCGAATACAGTGCGTCGCGAATGAGGCGCTCGCGGTGACACCCTTCATCAAACTCTTCCCCGTTTGACCGCGTGCGTGGGGTAGGAGGAGAACAGGT-CCGTGAAGGGGTTGGTGGGTGGGGGTGGCGGACACATCAAGACTTTGCCTGTGGTTTTGCCTGTTTTATTGTATGTTTAAGTTGCAGCAGGGGATGGGGAGGGTTGTGTTGTGGATGAAATAAAA--TTTTAAAATA]

[+] EMBL BM598898             [CCGCCCACGCGTCCGGGCGTGCGGTAGTGCACGGTCAGTCCTGCCGGGAAAGACTCGCTCGCTCGTTCGCTCGCTGATCTCGCCGTGTTCGTGCAGTTCTTCTACACTC GTCC ATCATGGTGTCTGCCGGGGAGTATCTACGGACGCTGGTAGTGTTGGCCGCCATCAGCTCGCTGCGATTAGTCGGCGGTGCGCCGATGCGTGGCATCAGTGATGGCGGAGGATGTAGGCGGAGTGCAGCGACAGAACTACCCGCGTGCATTGGTACTTCGATTCAGCACTTTGTCAACTTTCTGTCCAGT GGGAAGCTGTCGCCGCGCCACACAATCACCCCGTTCGATCCGCTGCTACTGCCCAACATGACCATTGGCCAGGCTGTTTACGTGAACCGATACCTCGTTGGGCTGAAGAATGCTTTCATCCAGAATGTGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CNS08HP6             [          ttcgtGGCGTGCGGTAGTGCACGGTCAGTCCTGCTGGGGAAGACTCGCTCGCTCGTTCGCTCGCTGATCTCGCCGTGTTCGTCCAATTCTTCTACACTC GTCC ATCATGGTGTCTGCCGGGGAGTATCTACGGACGCTGGTAGTGCTGGCCGCCATCAGCTCGCTACGGTTAGTCGGCGGTGCGCCGATGCGTGGAATCAGTGATGGCGGAGGATGTAGGCGGAGTGCAGCGACAGAACTGCCCGCGTGCATCGGTACTTCGATTCAGCACTTTGTCAACTTTCTGTCCAGTGGGGGAGCTGTCGCCGCGCCACACAATCACCCCGTTCGATCCGCTGCTACTGCCCAATATGACCTTTGGGCAGGCCGTCTACGTGAACCGATACCTCGTAGGGTTGAAGAATGCTTTCATCCAGAATGTGAGAGTGGACATGGAAAAGCTAGAGTTTAACGTGACGGCCCTGATGCCCGCGCTCGAGATGCTGGGCATGTTCTCGATGGAAACGGTCAACGATCGGCACTCGGTGACGGATCACTCCATCCTTACCTTCTCCATTCGCAACACAGCGGTAACGTTTGTCGGGGAGGGGCACCCTGTACACCGCAACCAGTGGGAC                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CNS08G9O             [                                                 AAGACTCGCTCGCTCGTTCGCTCGCTGATCTCGCCGTGTTCGTCCAATTCTTCTACACTC GTCC ATCATGGTGTCTGCCGGGGAGTATCTACGGACGCTGGTAGTGCTGGCCGCCATCAGCTCGCTACGGTTAGTCGGCGGTGCGCCGATGCGTGGAATCAGTGATGGCGGAGGATGTAGGCGGAGTGCAGC ACAGAACTGCCCGCGTGCATCGGTACTTCGATTCAGCACTTTGTCAACTTTCTGTCCAGT GGGAAGCTGTCGCCGCGCCACACAATCACCCCGTTCGATCCGCTGCTACTGCCCAATATGACCTTTGGGCAGGCCGTCTACGTGAACCGATACCTCGTAGGGTTGAAGAATGCTTTCATCCAGAATGTGAGAGTGGACATGGAAAAGCTAGAGTTTAACGTGACGGCCCTGATGCCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CNS08G8B             [                                                     CTCGCTCGCTCGTTCGCTCGCTGATCTCGCCGTGTTCGTCCAATTCTTCTACACTCGGGCCGGGGGGGGGGTCTGCCGGGGAGTATCTACGGACGCTGGTAGTGCTGGCCGCCATCAGCTCGCTACGGTTAGTCGGCGGTGCGCCGATGCGTGGAATCAGTGATGGCGGAGGATGTAGGCGGAGTGCAGCGACAGAACTGCCCGCGTGCATCGGTACTTCGATTCAGCACTTTGTCAACTTTCTGTCCAGT GGGAAGCTGTCGCCGCGCCACACAATCACCCCGTTCGATCCGCTGCTACTGCCCAATATGACCTTTGGGCAGGCCGTCTACGTGAACCGATACCTCGTAGGGTTGAAGAATGCTTTCATCCAGAATGTGAGAGTGGACATGGAAAAGCTAGAGTTTAACGTGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CNS08G9P             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTAACGTGACGGCCCTGATGCCCGCGCTCGAGATGCTGGGCATGTTCTCGATGGAAACGGTCAACGATCGGCACTCGGTGACGGATAACTCCATCCTTACCTTCTCCATTCGCAACACAGCGGTAACGTTTGTC GGGAGGGGCACCCTGTACACCGCAACCAGTGGGACTAGTGGCACGGTGGGCAAGTATCTACGGCTACACCTTACCATCCCACAGATGGTGATCGGTGGCAGCAGTCTGGCGGACAGTGATCGTCACTTA CGGACGCCAGCCGGACGGTTGCCGCGGCCAAGCTGAAACGCCTGATCGAGAAGGACTTCGGCTGCAGCTGGCCAAGCGAATACAGTGCGTCGCGATTGAGGCGCTCGCGGTGACACCCTTCATCAAACTCTTCCCCGTTTGACCGCGTGCGTGGGGTAGGAGGAGAACAGGT CCGTGAAGGGGTTGGTGGGTGGGGGTGGCGGACACATCAAGACTTTGCCTGTGGTTTTGCCTGTTTTATTGTATGTTTAAGTTGCAGCAGGGGATGGGGAGGGTTGTGTTGTGGATGAAATAAAA  TTTTAAAATA]
[-] EMBL CNS08HP7             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               agccgcGTAACGTTTGTCCGGGAGGGGCACCCTGTACACCGCAACCAGTGGGACTAGTGGCACGGTGGGCAAGTATCTACGGCTACACCTTACCATCCCACAGATGGTGATCGGTGGCAGCAGTCTGGCGGACAGTGATCGTCACCTACCGGACGCCAGCCGGACGGTTGCCGCGGCCAAGCTGAAACGCCTGATCGAGAAGGACTTCGGCTGCAGCTGGCCAAGCGAATACAGTGCGTCGCGAATGAGGCGCTCGCGGTGACACCCTTCATCAAACTCTTCCCCGTTTGACCGCGTGCGTGGGGTAGGAGGAGAACAGGT CCGTGAAGGGGTTGGTGGGTGGGGGTGGCGGACACATCAAGACTTTGCCTGTGGTTTTGCCTGTTTTATTGTATGTTTAAGTTGCAGCAGGGGATGGGGAGGGTTGTGTTGTGGATGAAATAAAA  TGTT      ]
[-] EMBL CNS08G8C             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGACGCCAGCCGGACGGTTGCCGCGGCCAAGCTGAAACGCCTGATCGAGAAGGACTTCGGCTGCAGCTGGCCAAGCGAATACAGTGCGTCGCGAATGAGGCGCTCGCGGTGACACCCTTCATCAAACTCTTCCCCGTTTGACCGCGTGCGTGGGGTAGGAGGAGAACAGGTCCCCCCCACCGGGTGGTGGGTGGGGGTGGCGGACACATCAAGACTTTGCCTGTGGTTTTGCCTGTTTTATTGTATGTTTAAGTTGCAGCAGGGGATGGGGAGGGTTGTGTTGTGGATGAAATAAAATGTTTTAA    ]


>consensus_7343#0 CCGCCCACGCGTCCGGGCGTGCGGTAGTGCACGGTCAGTCCTGCCGGGAAAGACTCGCTC GCTCGTTCGCTCGCTGATCTCGCCGTGTTCGTCCAATTCTTCTACACTCGTCCATCATGG TGTCTGCCGGGGAGTATCTACGGACGCTGGTAGTGCTGGCCGCCATCAGCTCGCTACGGT TAGTCGGCGGTGCGCCGATGCGTGGAATCAGTGATGGCGGAGGATGTAGGCGGAGTGCAG CGACAGAACTGCCCGCGTGCATCGGTACTTCGATTCAGCACTTTGTCAACTTTCTGTCCA GTGGGAAGCTGTCGCCGCGCCACACAATCACCCCGTTCGATCCGCTGCTACTGCCCAATA TGACCTTTGGGCAGGCCGTCTACGTGAACCGATACCTCGTAGGGTTGAAGAATGCTTTCA TCCAGAATGTGAGAGTGGACATGGAAAAGCTAGAGTTTAACGTGACGGCCCTGATGCCCG CGCTCGAGATGCTGGGCATGTTCTCGATGGAAACGGTCAACGATCGGCACTCGGTGACGG ATCACTCCATCCTTACCTTCTCCATTCGCAACACAGCGGTAACGTTTGTCGGGGAGGGGC ACCCTGTACACCGCAACCAGTGGGACTAGTGGCACGGTGGGCAAGTATCTACGGCTACAC CTTACCATCCCACAGATGGTGATCGGTGGCAGCAGTCTGGCGGACAGTGATCGTCACTTA CGGACGCCAGCCGGACGGTTGCCGCGGCCAAGCTGAAACGCCTGATCGAGAAGGACTTCG GCTGCAGCTGGCCAAGCGAATACAGTGCGTCGCGAATGAGGCGCTCGCGGTGACACCCTT CATCAAACTCTTCCCCGTTTGACCGCGTGCGTGGGGTAGGAGGAGAACAGGTCCGTGAAG GGGTTGGTGGGTGGGGGTGGCGGACACATCAAGACTTTGCCTGTGGTTTTGCCTGTTTTA TTGTATGTTTAAGTTGCAGCAGGGGATGGGGAGGGTTGTGTTGTGGATGAAATAAAATTT TAAAATA



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)