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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7364#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1274 fasta sequence
[CCGCAAGGCCTCGTCGCGCGTACTGTCATTATTCGTGTAGCTCGTCGTCGCGCCGTGTGTTTACGTTCTAGTTTGCTACCCGCCCGGAGGGGGTGCCATTTTTCGCTGATGCACCACAAGATCGAAAACCGGGCACTAGTCGAGAACTGTACGGGCTATACGTTGAAGAACCTCCACCGGCACAATATAGTTGGCAAAGTGTGTGCATACCTTGGCGAGAAAGGGTAGAAGTGTACGTGCGACGGATTCCGATGGAGACGCATGATAGTTGGACGATAACACATGGGCTGTGGTAGTGTGCGAGTGTTTAGATAGGCACTTTTTACATCGCGTATTGACTCGCCGACTCGCGGCAAGTGTGATTTTATTGAGCAGTGGTAGACGGTGAACAAATAGCTTAACGACTACAGCTAGTCTTATCTTC---AGCCCTGCGAGAGGGTTATTTATCTTCTGATTGCACCGCACCGTTGAAGTATTGCGAATCGCTATCTTCAACGAGCGTCGCATCCTCCTTTTCCCGATTGCTGGCGGTGACGAGCTGTCCCAATGCTAGCACATCCGCACAGTGTGTGACGGACTGCAGAATGGCACCGACCGAAAACGGGACGACCGATGTTGAGCAGGCAATCGGAACGCCCGCGTTGGGCGTTGAGGACGAAGAACGAAAGGATCACCATGACAACGAAGCTCAGCCGCTCTCGAGGGGCGATGGATGCGAAAAGCTGACAGCCTCAAACGAGACGAACAAAGCAACAACCACGTCCATTGGCTGGAAGGATGGCTATCAGCAGATACTAGCGACCTGTTTGGTGAATTTGATAGTTGTCCAGGCAGGTATCAACATGACCTACTCGGCCATTCTGCTGCCTCAGCTCTCCGAGCCAGACAGCCCAATACTGATTGGGCGCAACGAAGCGTCCTGGATAGCGTCCGTGGTGACGATTGCTCTTCCACTTGGATCGCTCGTCGTCGGTCAGCTGATGGATCAGTTCGGACGGAAAAAGATCTCACTCGCAACGTGTGTTCCGTTTGCTGTGGGCTGGATTTTGATTGCCGGTGCGTCGAACGTTGGCATGATCTACATCGCTCGCATCATCCTGGGAACGTCCGGCGGTCTCACCACGGTGGCCCTGGTGTACGTGAGCGAAATCTCGCACGTATCCCTGCGTCCGATGCTGCTGTGTGCCAACAGTGTGTTTGTTTCGTTCGGGATTTTGCTAACCTGCGTTCTAGCGGTGTTCTTCGATTGGCGAGCAATAGCGTACATTTTCGCT]
[+] EMBL BM613043 [CCGCAAGGCCTCGTCGCGCGTACTGTCATTATTCGTGTAGCTCGTCGTCGCGCCGTGTGTTTACGTTCTAGTTTGCTACCCGCCCGGAGGGGGTGCCATTTTTCGCTGATGCACCACAAGATCGAAAACCGGGCACTAGTCGAGAACTGTACGGGCTATACGTTGAAGAACCTCCACCGGCACAATATAGTTGGCAAAGTGTGTGCATACCTTGGCGAGAAAGGGTAGAAGTGTACGTGCGACGGATTCCGATGGAGACGCATGATAGTTGGACGATAACACATGGGCTGTGGTAGTGTGCGAGTGTTTAGATAGGCACTTTTTACATCGCGTATTGACTCGCCGACTCGCGGCAAGTGTGATTTTATTGAGCAGTGGTAGACGGTGAACAAATAGCTTAACGACTACAGCTAGTCTTATCTTCATGAGCCCTGCGAGAGGGTTATTTATCTTCTGATTGCACCGCACCGTTGAAGTATTGCGAATCGCTATCTTCAACGAGCGTCGCATCCTCCTTTTCCCGATTGCTGGCGGTGACGAGCTGTCCCAATGCTAGCACATCCGCACAGTGTGTGACGGACTGCAGAATGGCACCGACCGAAAAC ]
[+] EMBL BM619019 [ ccgATTCGTGTAGCTCGTCGTCGCGCCGTGTGTTTACGTTCTAGTTTGCTACCCGCCCGGAGGGGGTGCCATTTTTCGCTGATGCACCACAAGATCGAAAACCGGGCACTAGTCGAGAACTGTACGGGCTATACGTTGAAGAACCTCCACCGGCACAATATAGTTGGCAAAGTGTGTGCATACCTTGGCGAGAAAGGGTAGAAGTGTACGTGCGACGGATTCCGATGGAGACGCATGATAGTTGGACGATAACACATGGGCTGTGGTAGTGTGCGAGTGTTTAGATAGGCACTTTTTACATCGCGTATTGACTCGCCGACTCGCGGCAAGTGTGATTTTATTGAGCAGTGGTAGACGGTGAACAAATAGCTTAACGACTACAGCTAGTCTTATCTTC AGCCCTGGGAGAGGGTTATTTATCTTCTGATTGCACCGCACCGTTGAAGTATTGCGAATCGCTATCTTCAACGAGCGTCGCATCCTCCTTTTCCCGATTGCTGGCGGGGACGAGCTGTCCCAATGCTAGCACATCCGCACAGTGTGTGACGGACTGCAGAATGGCACCGACCGAAAACGGGACGACCGATGTTGAGCAGGCAATC ]
[+] EMBL BM604185 [ ccgCGGAC GCGTG GGCGGACTGCAGAATGGCACCGACCGAAAACGGGACGACCGATGTTGAGCAGGCAATCGGAACGCCCGCGTTGGGCGTTGAGGACGAAGAACGAAAGGATCACCATGACAACGAAGCTCAGCCGCTCTCGAGGGGCGATGGATGCGAAAAGCTGACAGCCTCAAACGAGACGAACAAAGCAACAACCACGTCCATTGGCTGGAAGGATGGCTATCAGCAGATACTAGCGACCTGTTTGGTGAATTTGATAGTTGTCCAGGCAGGTATCAACATGACCTACTCGGCCATTCTGCTGCCTCAGCTCTCCGAGCCAGACAGCCCAATACTGATTGGGCGCAACGAAGCGTCCTGGATAGCGTCCGTGGTGACGATTGCTCTTCCACTTGGATCGCTCGTCGTCGGTCAGCTGATGGATCAGTTCGGACGGAAAAAGATCTCACTCGCAACGTGTGTTCCGTTTGCTGTGGGCTGGATTTTGATTGCCGGTGCGTCGAACGTTGGCATGATCTACATCGCTCGCATCATCCTGGGAACGTCCGGCGGTCTCACCACGGTGGCCCTGGTGTACGTGAGCGAAATCTCGC ]
[+] EMBL BM647928 [ ccgCGGACTGCAGAATGGCACCGACCGAAAACGGGACGACCGATGTTGAGCAGGCAATCGGAACGCCCGCGTTGGGCGTTGAGGACGAAGAACGAAAGGATCACCATGACAACGAAGCTCAGCCGCTCTCGAGGGGCGATGGATGCGAAAAGCTGACAGCCTCAAACGAGACGAACAAAGCAACAACCACGTCCATTGGCTGGAAGGATGGCTATCAGCAGATACTAGCGACCTGTTTGGTGAATTTGATAGTTGTCCAGGCAGGTATCAACATGACCTACTCGGCCATTCTGCTGCCGCAGCTCTCCGAGCCAGACAGCCCAATACTGATTGGGCGCAACGAAGCGTCCTGGATAGCGTCCGTGGTGACGATTGCTCTTCCACTTGGATCGCTCGTCGTCGGTCAGCTGATGGATCAGTTCGGACGGAAAAAGATCTCACTCGCAACGTGTGTTCCGTTTGCTGTGGGCTGGATTTTGATTGCCGGTGCGTCGAACGTTGGCATGATCTACATCGCTCGCATCATCCTGGGAACGTCCGGCGGTCTCACCACGGTGGCCCTGGTGTACGTGAGCGAAATCTCGCACGTATCCCTGCGTCCGATGCTGCTGTGTGCCAACAGTGTGTTTGTTTCGTTCGGGATTTTGCTAACCTGCGTTCTAGCGGTGTTCTTCGATTGGCGAGCAATAGCGTACATTTTCGCT]
[+] EMBL BM586957 [ ccgTGCAGAATGGCACCGACCGAAAACGGGACGACCGATGTTGAGCAGGCAATCGGAACGCCCGCGTTGGGCGTTGAGGACGAAGAACGAAAGGATCACCATGACAACGAAGCTCAGCCGCTCTCGAGGGGCGATGGATGCGAAAAGCTGACAGCCTCAAACGAGACGAACAAAGCAACAACCACGTCCATTGGCTGGAAGGATGGCTATCAGCAGATACTAGCGACCTGTTTGGTGAATTTGATAGTTGTCCAGGCAGGTATCAACATGACCTACTCGGCCATTCTGCTGCCTCAGCTCTCCGAGCCAGACAGCCCAATACTGATTGGGCGCAACGAAGCGTCCTGGATAGCGTCCGTGGTGACGATTGCTCTTCCACTTGGATCGCTCGTCGTCGGTCAGCTGATGGATCAGTTCGGACGGAAAAAGATCTCACTCGCAACGTGTGTTCCGTTTGCTGTGGGCTGGATTTTGATTGCCGGTGCGTCGAACGTTGGCATGATCTACATCGCTCGCATCATCCTGGGAACGTCCGGCGGTCTCACCACGGTGGCCCTGGTGTACGTGAGCGAAA ]
[+] EMBL BM588231 [ ccgGCAGAATGGCACCGACCGAAAACGGGACGACCGATGTTGAGCAGGCAATCGGAACGCCCGCGTTGGGCGTTGAGGACGAAGAACGAAAGGATCACCATGACAACGAAGCTCAGCCGCTCTCGAGGGGCGATGGATGCGAAAAGCTGACAGCCTCAAACGAGACGAACAAAGCAACAACCACGTCCATTGGCTGGAAGGATGGCTATCAGCAGATACTAGCGACCTGTTTGGTGAATTTGATAGTTGTCCAGGCAGGTATCAACATGACCTACTCGGCCATTCTGCTGCCTCAGCTCTCCGAGCCAGACAGCCCAATACTGATTGGGCGCAACGAAGCGTCCTGGATAGCGTCCGTGGTGACGATTGCTCTTCCACTTGGATCGCTCGTCGTCGGTCAGCTGATGGATCAGTTCGGACGGAAAAAGATCTCACTCGCAACGTGTGTTCCGTTTGCTGTGGGCTGGATTTTGATTGCCGGTGCGTCGAACGTTGGCATGATCTACATCGCTCGCATCATCCTGGGAACGTCCGGCGGTCTCACCACGGTGGCCCTGGTGTACGTGAGCGAAATCTCGCACGTATCCCTGCGTCCGATGCTGCTGTGTGCCAACAGTGTGTTTGTTTCGTTCGGGATTTTGCTAACCTGCGTTCTAGCGGTGTTCTTCGATTGGCGAGCAATAGCGTACAT ]
consensusID : consensus_7364#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 628 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGATTTTGATTGCCGGTGCGTCGAACGTTGGCATGATCTACATCGCTCGCATCATCCTGGGAACGTCCGGCGGTCTCACCACGGTGGCCCTGGTGTACGTGAGCGAAATCTCGCACGTATCCCTGCGTCCGATGCTGCTGTGTGCCAACAGTGTGTTTGTTTCGTTCGGGATTTTGCTAACCTGCGTTCTAGCGGTGTTCTTCGATTGGCGAGCAATAGCGTACATTTTCGCTGGATTCTCAGTGGTAACATTTTTGCTCATCCTGCTTATTCCCGAGTCTCCCCACTGGCTGGTGACGTTTACCAAGAAAGATCCCACCAAAGCTCGGGCTGTTCTGTGCTGGCTGTATCGCAACAAGAAGCTGGCCGAGGAACAATTTCAGCAAATTGCTGCCAACAGTACGCCGACCCGTCAGCCGCCACACGTTACGAACGGGAAAGCAAAGTGTGCCATAAACTCGCTATCGTTGAAAGTGTTCCTGCAGCCGCGCGTTTACCGGCCGATGACGATTCTGCTGCTAGTGTTCCTGTTTCAGCAGCTATCCCGGTGCGTACGTGCTCATCTTTTACGCCCTGAACGTATTCCAGCAGATCAACGAAGCA]
[+] EMBL BM601637 [CCGCCCACGCGTCCGCCCACGCGTCCGATTTTGATTGCCGGTGCGTCGAACGTTGGCATGATCTACATCGCTCGCATCATCCTGGGAACGTCCGGCGGTCTCACCACGGTGGCCCTGGTGTACGTGAGCGAAATCTCGCACGTATCCCTGCGTCCGATGCTGCTGTGTGCCAACAGTGTGTTTGTTTCGTTCGGGATTTTGCTAACCTGCGTTCTAGCGGTGTTCTTCGATTGGCGAGCAATAGCGTACATTTTCGCTGGATTCTCAGTGGTAACATTTTTGCTCATCCTGCTTATTCCCGAGTCTCCCCACTGGCTGGTGACGTTTACCAAGAAAGATCCCACCAAAGCTCGGGCTGTTCTGTGCTGGCTGTATCGCAACAAGAAGCTGGCCGAGGAACAATTTCAGCAAATTGCTGCCAACAGTACGCCGACCCGTCAGCCGCCACACGTTACGAACGGGAAAGCAAAGTGTGCCATAAACTCGCTATCGTTGAAAGTGTTCCTGCAGCCGCGCGTTTACCGGCCGATGACGATTCTGCTGCTAGTGTTCCTGTTTCAGCAGCTATCCCGGTGCGTACGTGCTCATCTTTTACGCCCTGAACGTATTCCAGCAGATCAACGAAGCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7364#0 CCGCAAGGCCTCGTCGCGCGTACTGTCATTATTCGTGTAGCTCGTCGTCGCGCCGTGTGT 60
consensus_7364#1 ------------------------------------------------------------
consensus_7364#0 TTACGTTCTAGTTTGCTACCCGCCCGGAGGGGGTGCCATTTTTCGCTGATGCACCACAAG 120
consensus_7364#1 ------------------------------------------------------------
consensus_7364#0 ATCGAAAACCGGGCACTAGTCGAGAACTGTACGGGCTATACGTTGAAGAACCTCCACCGG 180
consensus_7364#1 ------------------------------------------------------------
consensus_7364#0 CACAATATAGTTGGCAAAGTGTGTGCATACCTTGGCGAGAAAGGGTAGAAGTGTACGTGC 240
consensus_7364#1 ------------------------------------------------------------
consensus_7364#0 GACGGATTCCGATGGAGACGCATGATAGTTGGACGATAACACATGGGCTGTGGTAGTGTG 300
consensus_7364#1 --------------------CCGCCCACGCGTCCGCCCACGCGTCCGATTTTG-ATTGCC 39
* * * ** ** * * * * * * * **
consensus_7364#0 CGAGTGTTTAG-ATAGGCACTTTTTACATCGC--GTATTGACTCGCCGACTCGCGGCAAG 357
consensus_7364#1 GGTGCGTCGAACGTTGGCATGATCTACATCGCTCGCATCATCCTGGGAACGTCCGGCG-G 98
* * ** * * **** * ******** * ** * * ** **** *
consensus_7364#0 TGTGATTTTATTGAGCAGTGGTAGACGGTGAACAAATAGCTTAACGACTACAGCTA-GTC 416
consensus_7364#1 TCTCACCACGGTG-GCCCTGGTGTACG-TGAGCGA--AATCTCGCACGTATCCCTGCGTC 154
* * * ** ** **** *** *** * * * * * ** ** ***
consensus_7364#0 TTATCTTCAGCCCTGCGAGAGGGTTATTTATCTT-CTGATTGCACCGCACCGTTGAAGTA 475
consensus_7364#1 CGATGCTGCTGTGTGCCAACAGTGTGTTTGTTTCGTTCGGGATTTTGCTAACCTGCGTTC 214
** * *** * * * *** * * * ** ** *
consensus_7364#0 TTGCGAATCGCTATCTTCAACGAGCG-TCGCATCCTCCTTTTCCCGATTGCTGGCGGTGA 534
consensus_7364#1 TAGCGGTGTTCTTCGATTGGCGAGCAATAGCGTACATTTTCGCTGGATTCTCAGTGGTAA 274
* *** ** * ***** * ** * * ** * **** * *** *
consensus_7364#0 CGAGCTGTCCCAATGCTAGCACATCCGCACAGTGTGTGACGGACTGCAGAATGGCACCGA 594
consensus_7364#1 C-ATTTTTGCTCATCCT-GCTTATTCCCGAGTCTCCCCACTGGCTG----GTGACGTTTA 328
* * * * * ** ** ** ** * * ** * *** ** * *
consensus_7364#0 CCGAAAACGGGACGACCGATGTTGAGCAGGCAATCGGAACGCCCGCGTTGGGCGTTGAGG 654
consensus_7364#1 CCAAGAAAGATCCCACCAAAGCT---CGGGCTGTT-------CTGTGCTGGCTGTATCGC 378
** * ** * * *** * * * * *** * * * * *** ** *
consensus_7364#0 ACGAAGAACGAAAGGATCACCATGACAACGAAGCTCAGCCGCTCTCGAGGGGCGATGGAT 714
consensus_7364#1 A------ACAAGAAGCTGGCC--GAGGAACAATTTCAGCAAATTGCT----GCCAACAGT 426
* ** * * * * ** ** * ** ***** * * ** * *
consensus_7364#0 GCGAAAAGCTGACAGCC-TCAAACGAGACGAACAAAGCAACAACCACGTCCATTGGCTGG 773
consensus_7364#1 ACGCCGACCCGTCAGCCGCCACACGTTACGAACGGGAAAGCAAAGTGTGCCATAAACTCG 486
** * * * ***** ** *** ****** * *** **** ** *
consensus_7364#0 AAGGATGGCTATCAGCAGATAC-TAGCGACCTGTTTGGTGAATTTGATAGTTGTCCAGGC 832
consensus_7364#1 C--TATCGTTGAAAGTGTTCCTGCAGCCGCGCGTTTACCGG--CCGATGACGATTCTG-C 541
** * * ** *** * **** * *** * * * *
consensus_7364#0 AGGTATCAACATGACCTACTCGGCCATTCTGCTGCCTCAGCTCTCCGAGCCAGACAGCCC 892
consensus_7364#1 TGCTAGTGTTCCTGTTTCAGCAGCTATCCCGGTGCGTACGTGCTC-ATCTTTTACGCCCT 600
* ** * * ** ** * * *** * * *** ** **
consensus_7364#0 AATACTGATTGGGCG---CAACGAAGCGTCCTGGATAGCGTCCGTGGTGACGATTGCTCT 949
consensus_7364#1 GAACGTATTCCAGCAGATCAACGAAGCA-------------------------------- 628
* * * ** *********
consensus_7364#0 TCCACTTGGATCGCTCGTCGTCGGTCAGCTGATGGATCAGTTCGGACGGAAAAAGATCTC 1009
consensus_7364#1 ------------------------------------------------------------
consensus_7364#0 ACTCGCAACGTGTGTTCCGTTTGCTGTGGGCTGGATTTTGATTGCCGGTGCGTCGAACGT 1069
consensus_7364#1 ------------------------------------------------------------
consensus_7364#0 TGGCATGATCTACATCGCTCGCATCATCCTGGGAACGTCCGGCGGTCTCACCACGGTGGC 1129
consensus_7364#1 ------------------------------------------------------------
consensus_7364#0 CCTGGTGTACGTGAGCGAAATCTCGCACGTATCCCTGCGTCCGATGCTGCTGTGTGCCAA 1189
consensus_7364#1 ------------------------------------------------------------
consensus_7364#0 CAGTGTGTTTGTTTCGTTCGGGATTTTGCTAACCTGCGTTCTAGCGGTGTTCTTCGATTG 1249
consensus_7364#1 ------------------------------------------------------------
consensus_7364#0 GCGAGCAATAGCGTACATTTTCGCT 1274
consensus_7364#1 -------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||