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Anopheles gambiae
cluster # 7438 cluster # 7438       Sequences # 7       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7438#0 length = 1056 sequences # 3  
consensus_7438#1 length = 753 sequences # 1  
consensus_7438#2 length = 731 sequences # 1  
consensus_7438#3 length = 630 sequences # 1  
consensus_7438#4 length = 614 sequences # 1  

consensusID : consensus_7438#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1056
fasta sequence
                              [AAAAAAAAAATCAAACACCTATGCGTATCGAAAGCAAAGAGCAAAAGGAACCGAGTTTCGCTGTTTGGCTTGTGGAGCTGTTTGCCCGCCTTGATTTGGAGCACCAATTCCCCATCGAAGTCCCAGCTGAGCGCGTGTGCGTGTGTGTGTTGTGCGACGTCCGATCAACTACCTCAGGCAGCTTGGCAGAATGGCAAAGAAAGCGTTCCAGCACCAGGCAGGCACGGCCATGGAGTGTTTAAGCATTCCCATAACGTTACACAAAGAGAAGGACATTGACGAGGAGGGGCGGGAGGTGCTAAAGTGTGGGTTCAAAATCGGTGGAGGAATTGATCAAGATTTCCGCAAAAGCCCCCAGGGTTACACGGATTATGGTATCTACGTAACGGAAGTGCACGAAGGTAGCCCAGCGGCGAAATCGGGACTCCGGATGCATGACAAAATTTTGCAGTGCAACGGGTACGATTTCACCATGGTTACGCACAAGAAGGCGGTTAGCTACATACGGAAAAACCCCGTCCTAAACCTGCTGGTCGCAAGGAAGGGCGTTACCTCGACCTAAGCCTACCGCGTCCATCAAGGAAAACGCAAACGAACGCGTCTACAAAAGCACAAACTTCTCTCTCTACACACATACACACCGTACACCGTGCGTTATCTGCATACGAATGGCGGATAAGAAACGAAAACAAAGAGCGTGAAATACTCCCTGCTGCCCCCTGTCGGAAACAGGCGAAACCCACAGGAAACATTCCATCAGTAAGTAGTAACCCTTCATAGAGAAACTCAGCAGTCTGGGGACATCAAACCATGCCCCTTAGGTTCTCGCATTATACTACAAAGCATTCCATGGCAACAACAGTCTTTGCTGAGAGGAGAAGAGCTGTATCGTTATCAAGTTGTTTCATAGCAGTAGCTCATCTTTGGTCTAACTACGACATCCTCTCGACAAACAGTCTTACTCTACTTAGCGTACTACTACTACTACTACCACTGAACGTAACGTAACATTTTCCGACGGCACACGGCGGCAGCTCGATTTTACACGCATTTTTA]

[+] EMBL CNS09EKL             [AAAAAAAAAATCAAACACCTATGCGTATCGAAAGCAAAGAGCAAAAGGAACCGAGTTTCGCTGTTTGGCTTGTGGAGCTGTTTGCCCGCCTTGATTTGGAGCACCAATTCCCCATCGAAGTCCCAGCTGAGCGCGTGTGCGTGTGTGTGTTGTGCGACGTCCGATCAACTACCTCAGGCAGCTTGGCAGAATGGCAAAGAAAGCGTTCCAGCACCAGGCAGGCACGGCCATGGAGTGTTTAAGCATTCCCATAACGTTACACAAAGAGAAGGACATTGACGAGGAGGGGCGGGAGGTGCTAAAGTGTGGGTTCAAAATCGGTGGAGGAATTGATCAAGATTTCCGCAAAAGCCCCCAGGGTTACACGGATTATGGTATCTACGTAACGGAAGTGCACGAAGGTAGCCCAGCGGCGAAATCGGGACTCCGGATGCATGACAAAATTTTGCAGTGCAACGGGTACGATTTCACCATGGTTACGCACAAGAAGGCGGTTAGCTACATACGGAAAAACCCCGTCCTAAACCTGCTGGTCGCAAGGAAGGGCGTTACCTCGACCTAAGCCTACCGCGTCCATCAAGGAAAACGCAAACGAACGCGTCTACAAAAGCACAAACTTCTCTCTCTACACACATACACACCGTACACCGTGCGTTATCTGCATACGAATGGCGGATAAGAAACGAAAACAAAGAGCGTGAAATACTCCCTGCTGCCCCCTGTCGGAAACAGGCGAAACCCACAGGAAACATTCCATCAGTAAGTAGTAACCCTTCATAGAGAAACTC                                                                                                                                                                                                                                                                            ]
[+] EMBL BX603984             [      AAAATCAAACACCTAGGCGTATCGAAAGCAAAGAGCAAAAGGAACCGAGTTTCGCTGTTTGGCTTGTGGAGCTGTTTGCCCGCCTTGATTTGGAGCACCAATTCCCCATCGAAGTCCCAGCTGAGCGCGTGTGCGTGTGTGCGTTGTGCGACGTTCCACCAACTACCTCAGGCAGCTTGGCAGAATGGCAAAGAAAGCGTTCCAGCACCAGGCAGGCACGGCCATGGAGTGTTTAAGCATTCCCATAACGTTACACAAAGAGAAGGACATTGACGAGGAGGGACGGGAGGTGCTAAAGTGTGGGTTTAAAATCGGTGGAGGAATTGATCAAGATTTCCGCAAAAGCCCTCAGGGTTACACGGATTATGGTATCTACGTAACGGAAGTACACGAAGGTAGCCCAGCGGCGAAATCGGGACTCCGGATGCATGACAAAATTTTGCAGTGCAACGGGTACGATTTCACCATGGTTACGCACAAGAAGGCGGTTAGCTACATACGGAAAAACCCCGTCCTAAACCTGCTGGTCGCAAGGAAGGGCGTTACCTCGACCTAAGCCTACCGCGTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CNS09EKM             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GCACAAGAAGGCGGTTAGCTACATACGGAAAAACCCCGTCCTAAACCTGCTGGTCGCAAGGAAGGGCGTTACCTCGACCTAAGCCTACCGCGTCCATCAAGGAAAACGCAAACGAACGCGTCTACAAAAGCACAAACTTTTCTCTCTACACACATACACACCGTACACCGTGCGTTATCTGCATACGAATGGCGGATAAGAAACGAAAACAAAGAGCGTGAAATACTCCCTGCTGCCCCCTGTCGGAAACAGGCGAAACCCACAGGAAACATTCCATCAGTAAGTAGTAACCCTTCATAGAGAAACTCAGCAGTCTGGGGACATCAAACCATGCCCCTTAGGTTCTCGCATTATACTACAAAGCATTCCATGGCAACAACAGTCTTTGCTGAGAGGAGAAGAGCTGTATCGTTATCAAGTTGTTTCATAGCAGTAGCTCATCTTTGGTCTAACTACGACATCCTCTCGACAAACAGTCTTACTCTACTTAGCGTACTACTACTACTACTACCACTGAACGTAACGTAACATTTTCCGACGGCACACGGCGGCAGCTCGATTTTACACGCATTTTTA]


>consensus_7438#0 AAAAAAAAAATCAAACACCTATGCGTATCGAAAGCAAAGAGCAAAAGGAACCGAGTTTCG CTGTTTGGCTTGTGGAGCTGTTTGCCCGCCTTGATTTGGAGCACCAATTCCCCATCGAAG TCCCAGCTGAGCGCGTGTGCGTGTGTGTGTTGTGCGACGTCCGATCAACTACCTCAGGCA GCTTGGCAGAATGGCAAAGAAAGCGTTCCAGCACCAGGCAGGCACGGCCATGGAGTGTTT AAGCATTCCCATAACGTTACACAAAGAGAAGGACATTGACGAGGAGGGGCGGGAGGTGCT AAAGTGTGGGTTCAAAATCGGTGGAGGAATTGATCAAGATTTCCGCAAAAGCCCCCAGGG TTACACGGATTATGGTATCTACGTAACGGAAGTGCACGAAGGTAGCCCAGCGGCGAAATC GGGACTCCGGATGCATGACAAAATTTTGCAGTGCAACGGGTACGATTTCACCATGGTTAC GCACAAGAAGGCGGTTAGCTACATACGGAAAAACCCCGTCCTAAACCTGCTGGTCGCAAG GAAGGGCGTTACCTCGACCTAAGCCTACCGCGTCCATCAAGGAAAACGCAAACGAACGCG TCTACAAAAGCACAAACTTCTCTCTCTACACACATACACACCGTACACCGTGCGTTATCT GCATACGAATGGCGGATAAGAAACGAAAACAAAGAGCGTGAAATACTCCCTGCTGCCCCC TGTCGGAAACAGGCGAAACCCACAGGAAACATTCCATCAGTAAGTAGTAACCCTTCATAG AGAAACTCAGCAGTCTGGGGACATCAAACCATGCCCCTTAGGTTCTCGCATTATACTACA AAGCATTCCATGGCAACAACAGTCTTTGCTGAGAGGAGAAGAGCTGTATCGTTATCAAGT TGTTTCATAGCAGTAGCTCATCTTTGGTCTAACTACGACATCCTCTCGACAAACAGTCTT ACTCTACTTAGCGTACTACTACTACTACTACCACTGAACGTAACGTAACATTTTCCGACG GCACACGGCGGCAGCTCGATTTTACACGCATTTTTA



consensusID : consensus_7438#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 753
fasta sequence
                              [AGGCAGAATCGGCACGAGGCGATGTACGCTGTTTGGCTTGTGGAGCTGTTTGCCCGCCTTGATTTGGAGCACCAATTCCCCATCGAAGTCCCAGCTGAGCGCGTGTGCGTGTGTGCGTTGTGCGACGTTCCATCAACTACCTCAGGCAGCTTGGCAGAATGGCAAAGAAAGCGTTCCAGCACCAGGCAGGCACGGCCATGGAGTGTTTAAGCATTCCCATAACGTTACACAAAGAGAAGGACATTGACGAGGAGGGACGGGAGGTGCTAAAGTGTGGGTTTAAAATCGGTGGAGGAATTGATCAAGATTTCCGCGAAAAGCCCTCAGGGTTACACGGATTATGGTATCTACGTAACGGAAGTACACGAAGGTAGCCCAGCGGCGAAATCGGGACTCCGGATGCATGACAAAATTTTGCAGTGCAACGGGTACGATTTCACCATGGTTACGCACAAGAAGGCGGGTTAGCTACATACGGAAAAACCCCGTCCTAAACCTGCTGGTCGCAAGGAAGGGCGTTACCTCGAGCCTAAGCCTACCGCGTCCATCAAGCAAAACGCAAACGAACGCGTCTAAAAAAAGCACAAACTTCTCTCTCTACACACATACACACCGTACACCGTGGCGTTATCTGCCATCGCGAATGGCGGGATACGAAACGAGAAAGCAAAGGAGCGAGAAATACTCCCTGACTGCCCCTGGCCGGANACAGGGCGAAAAGCCACAGGAAACATTCAGGCCATACCGGGGCGA]

[+] EMBL BX466374             [AGGCAGAATCGGCACGAGGCGATGTACGCTGTTTGGCTTGTGGAGCTGTTTGCCCGCCTTGATTTGGAGCACCAATTCCCCATCGAAGTCCCAGCTGAGCGCGTGTGCGTGTGTGCGTTGTGCGACGTTCCATCAACTACCTCAGGCAGCTTGGCAGAATGGCAAAGAAAGCGTTCCAGCACCAGGCAGGCACGGCCATGGAGTGTTTAAGCATTCCCATAACGTTACACAAAGAGAAGGACATTGACGAGGAGGGACGGGAGGTGCTAAAGTGTGGGTTTAAAATCGGTGGAGGAATTGATCAAGATTTCCGCGAAAAGCCCTCAGGGTTACACGGATTATGGTATCTACGTAACGGAAGTACACGAAGGTAGCCCAGCGGCGAAATCGGGACTCCGGATGCATGACAAAATTTTGCAGTGCAACGGGTACGATTTCACCATGGTTACGCACAAGAAGGCGGGTTAGCTACATACGGAAAAACCCCGTCCTAAACCTGCTGGTCGCAAGGAAGGGCGTTACCTCGAGCCTAAGCCTACCGCGTCCATCAAGCAAAACGCAAACGAACGCGTCTAAAAAAAGCACAAACTTCTCTCTCTACACACATACACACCGTACACCGTGGCGTTATCTGCCATCGCGAATGGCGGGATACGAAACGAGAAAGCAAAGGAGCGAGAAATACTCCCTGACTGCCCCTGGCCGGANACAGGGCGAAAAGCCACAGGAAACATTCAGGCCATACCGGGGCGA]


>consensus_7438#1 AGGCAGAATCGGCACGAGGCGATGTACGCTGTTTGGCTTGTGGAGCTGTTTGCCCGCCTT GATTTGGAGCACCAATTCCCCATCGAAGTCCCAGCTGAGCGCGTGTGCGTGTGTGCGTTG TGCGACGTTCCATCAACTACCTCAGGCAGCTTGGCAGAATGGCAAAGAAAGCGTTCCAGC ACCAGGCAGGCACGGCCATGGAGTGTTTAAGCATTCCCATAACGTTACACAAAGAGAAGG ACATTGACGAGGAGGGACGGGAGGTGCTAAAGTGTGGGTTTAAAATCGGTGGAGGAATTG ATCAAGATTTCCGCGAAAAGCCCTCAGGGTTACACGGATTATGGTATCTACGTAACGGAA GTACACGAAGGTAGCCCAGCGGCGAAATCGGGACTCCGGATGCATGACAAAATTTTGCAG TGCAACGGGTACGATTTCACCATGGTTACGCACAAGAAGGCGGGTTAGCTACATACGGAA AAACCCCGTCCTAAACCTGCTGGTCGCAAGGAAGGGCGTTACCTCGAGCCTAAGCCTACC GCGTCCATCAAGCAAAACGCAAACGAACGCGTCTAAAAAAAGCACAAACTTCTCTCTCTA CACACATACACACCGTACACCGTGGCGTTATCTGCCATCGCGAATGGCGGGATACGAAAC GAGAAAGCAAAGGAGCGAGAAATACTCCCTGACTGCCCCTGGCCGGANACAGGGCGAAAA GCCACAGGAAACATTCAGGCCATACCGGGGCGA



consensusID : consensus_7438#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 731
fasta sequence
                              [ACACACAGTCTTACTCTACTCAGCGTTTTACTACTACTACTACTACTACCACTGAACGTAACGTAACATTTTCCGACGGCGCACGGCGGCAGCTCGATTTTACACGCATTTTTTGCAAAACAGCAGTGGTACGGAACAAAAAGGGAAATCGTTTTTTATTGCATATTTCTATTGATTATTTGTAAGCAAAGTGTTTCTAGGTATAATGATAGTATGAACGTGTTAGAGAGTGTTAAACGCCGCTTTCCCGGAGCGGGCGCCCACACTTTCCAGGGGTCAAACTGCCGCGCATTGGTACTCGTTGCTTATTAGGAGATTCTCCTCTTTTTGTGAGATTTTAGTGCATTTTTAGAGGTCAAAAGAGGATGAGCATTTGTTATGGTTAAATAAAAGGAAAACAAAAAAAAACAGATTCAAAACACAACAATAGGGAACACACTACAGCGTGACGAGCTCTGCATGACAACAAAGCGGAGTTGGAAAAGTGTGCTGTGTGAAAGAAGCGTGAAATTGAAGGGAAAATTTGATAGAACGTCGTTAAATATGTTGAGGGTTGGAGGGTGGTTGAGTGAAAATAAAGTTGTTCTTTTCTTTCATCCAACGGCAACATCCAACACAACAAGGGCAGACAGACAGCCAGACAGATAGACAGAGAGAGAGATACACGTACACTGTAGCGACCTTCGTACGGGATGTGTTCTCGTAGTTTTAAATATGCCGGGTCATCACTT]

[+] EMBL BX612538             [ACACACAGTCTTACTCTACTCAGCGTTTTACTACTACTACTACTACTACCACTGAACGTAACGTAACATTTTCCGACGGCGCACGGCGGCAGCTCGATTTTACACGCATTTTTTGCAAAACAGCAGTGGTACGGAACAAAAAGGGAAATCGTTTTTTATTGCATATTTCTATTGATTATTTGTAAGCAAAGTGTTTCTAGGTATAATGATAGTATGAACGTGTTAGAGAGTGTTAAACGCCGCTTTCCCGGAGCGGGCGCCCACACTTTCCAGGGGTCAAACTGCCGCGCATTGGTACTCGTTGCTTATTAGGAGATTCTCCTCTTTTTGTGAGATTTTAGTGCATTTTTAGAGGTCAAAAGAGGATGAGCATTTGTTATGGTTAAATAAAAGGAAAACAAAAAAAAACAGATTCAAAACACAACAATAGGGAACACACTACAGCGTGACGAGCTCTGCATGACAACAAAGCGGAGTTGGAAAAGTGTGCTGTGTGAAAGAAGCGTGAAATTGAAGGGAAAATTTGATAGAACGTCGTTAAATATGTTGAGGGTTGGAGGGTGGTTGAGTGAAAATAAAGTTGTTCTTTTCTTTCATCCAACGGCAACATCCAACACAACAAGGGCAGACAGACAGCCAGACAGATAGACAGAGAGAGAGATACACGTACACTGTAGCGACCTTCGTACGGGATGTGTTCTCGTAGTTTTAAATATGCCGGGTCATCACTT]


>consensus_7438#2 ACACACAGTCTTACTCTACTCAGCGTTTTACTACTACTACTACTACTACCACTGAACGTA ACGTAACATTTTCCGACGGCGCACGGCGGCAGCTCGATTTTACACGCATTTTTTGCAAAA CAGCAGTGGTACGGAACAAAAAGGGAAATCGTTTTTTATTGCATATTTCTATTGATTATT TGTAAGCAAAGTGTTTCTAGGTATAATGATAGTATGAACGTGTTAGAGAGTGTTAAACGC CGCTTTCCCGGAGCGGGCGCCCACACTTTCCAGGGGTCAAACTGCCGCGCATTGGTACTC GTTGCTTATTAGGAGATTCTCCTCTTTTTGTGAGATTTTAGTGCATTTTTAGAGGTCAAA AGAGGATGAGCATTTGTTATGGTTAAATAAAAGGAAAACAAAAAAAAACAGATTCAAAAC ACAACAATAGGGAACACACTACAGCGTGACGAGCTCTGCATGACAACAAAGCGGAGTTGG AAAAGTGTGCTGTGTGAAAGAAGCGTGAAATTGAAGGGAAAATTTGATAGAACGTCGTTA AATATGTTGAGGGTTGGAGGGTGGTTGAGTGAAAATAAAGTTGTTCTTTTCTTTCATCCA ACGGCAACATCCAACACAACAAGGGCAGACAGACAGCCAGACAGATAGACAGAGAGAGAG ATACACGTACACTGTAGCGACCTTCGTACGGGATGTGTTCTCGTAGTTTTAAATATGCCG GGTCATCACTT



consensusID : consensus_7438#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 630
fasta sequence
                              [CCGCGGACGCGTGGGCAATTCCCCATCGAAGTCCCAGCTGAGCGCGTGTGCGTGTGTGTGTTGTGCGACGTTCCATCAACTACCTCAGGCAGCTTGGCAGAATGGCAAAGAAAGCGTTCCAGCACCAGGCAGGCACGGCCATGGAGTGTTTAAGCATTCCCATAACGTTACACAAAGAGAAGGACATTGACGAGGAGGGACGGGAGGTGCTAAAGTGTGGGTTTAAAATCGGTGGAGGAATTGATCAAGATTTCCGCAAAAGCCCTCAGGGTTACACGGATTATGGTATCTACGTAACGGAAGTACACGAAGGTAGTCCAGCGGCGAAATCGGGACTCCGGATGCATGACAAAATTTTGCAGTGCAACGGGTACGATTTCACCATGGTTACGCACAAGAAGGCGGTTAGCTACATACGGAAAAACCCCGTCCTGAACCTGCTGGTCGCAAGGAAGGGCGTTACCTCGACCTAAGCCTACCGCGTCCATCAAGCAAAACGCAAACGAACGCGTCCACAAAAGCACAAACTTCTCTCTCTACACATACACACACACCGTGCGTTATCTGCATGCGAATGGCGGATGATAGGAAACGAAAACAAAGAGCGAGAAATACTCCCTGCTGCCCCCT]

[+] EMBL BM631196             [CCGCGGACGCGTGGGCAATTCCCCATCGAAGTCCCAGCTGAGCGCGTGTGCGTGTGTGTGTTGTGCGACGTTCCATCAACTACCTCAGGCAGCTTGGCAGAATGGCAAAGAAAGCGTTCCAGCACCAGGCAGGCACGGCCATGGAGTGTTTAAGCATTCCCATAACGTTACACAAAGAGAAGGACATTGACGAGGAGGGACGGGAGGTGCTAAAGTGTGGGTTTAAAATCGGTGGAGGAATTGATCAAGATTTCCGCAAAAGCCCTCAGGGTTACACGGATTATGGTATCTACGTAACGGAAGTACACGAAGGTAGTCCAGCGGCGAAATCGGGACTCCGGATGCATGACAAAATTTTGCAGTGCAACGGGTACGATTTCACCATGGTTACGCACAAGAAGGCGGTTAGCTACATACGGAAAAACCCCGTCCTGAACCTGCTGGTCGCAAGGAAGGGCGTTACCTCGACCTAAGCCTACCGCGTCCATCAAGCAAAACGCAAACGAACGCGTCCACAAAAGCACAAACTTCTCTCTCTACACATACACACACACCGTGCGTTATCTGCATGCGAATGGCGGATGATAGGAAACGAAAACAAAGAGCGAGAAATACTCCCTGCTGCCCCCT]


>consensus_7438#3 CCGCGGACGCGTGGGCAATTCCCCATCGAAGTCCCAGCTGAGCGCGTGTGCGTGTGTGTG TTGTGCGACGTTCCATCAACTACCTCAGGCAGCTTGGCAGAATGGCAAAGAAAGCGTTCC AGCACCAGGCAGGCACGGCCATGGAGTGTTTAAGCATTCCCATAACGTTACACAAAGAGA AGGACATTGACGAGGAGGGACGGGAGGTGCTAAAGTGTGGGTTTAAAATCGGTGGAGGAA TTGATCAAGATTTCCGCAAAAGCCCTCAGGGTTACACGGATTATGGTATCTACGTAACGG AAGTACACGAAGGTAGTCCAGCGGCGAAATCGGGACTCCGGATGCATGACAAAATTTTGC AGTGCAACGGGTACGATTTCACCATGGTTACGCACAAGAAGGCGGTTAGCTACATACGGA AAAACCCCGTCCTGAACCTGCTGGTCGCAAGGAAGGGCGTTACCTCGACCTAAGCCTACC GCGTCCATCAAGCAAAACGCAAACGAACGCGTCCACAAAAGCACAAACTTCTCTCTCTAC ACATACACACACACCGTGCGTTATCTGCATGCGAATGGCGGATGATAGGAAACGAAAACA AAGAGCGAGAAATACTCCCTGCTGCCCCCT



consensusID : consensus_7438#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 614
fasta sequence
                              [AGGCAAGAATCGGCACGATGGAGAGGAATTGATCAAAGATTTCCGCAAAAGCCCTCAGGGTTACACGGATTATGGTATCTACGTAACGGAAGTACACGAAGGTAGCCCAGCGGCGAAATCGGGACTCCGGATGCATGACAAAATTTTGCAGTGCAACGGGTACGATTTCACCATGGTTACGCACAAGAAGGCGGTTAGCTACATACGGAAAAACCCCGGTCCTAAACCTGCTGGGTCGCAAGGAAGGGCGTTACCTCGACCTAAGCCTACCGCGTCCATCAAGCAAAACGCAAACGAACGCGTCTAAAAAAGCACAAACTTCTCTCTCTACACACATACACACCGTACACCGTGCGTTATCTGCATGCGAATGGCGGATAAGAAACGAAAACAAAGAGCGAGAAATACTCCCTGCTGCCCCCTGGCGGAAACAGGCGAAANCCACAGGAAACATTCAGNCATAGCCGGCGGAACGTCGTTCGTTCCTGGGAACGTTCGCCGCGACGCTCATTGTGTGCACGTCATATTCATAGCCATCTAGATCTAAAATTAGAAAACCGTAATAGATCNTNGTACTGGCCAAACCTAGTGATGCAAACCCTTGTTCACTCATT]

[+] EMBL BX468129             [AGGCAAGAATCGGCACGATGGAGAGGAATTGATCAAAGATTTCCGCAAAAGCCCTCAGGGTTACACGGATTATGGTATCTACGTAACGGAAGTACACGAAGGTAGCCCAGCGGCGAAATCGGGACTCCGGATGCATGACAAAATTTTGCAGTGCAACGGGTACGATTTCACCATGGTTACGCACAAGAAGGCGGTTAGCTACATACGGAAAAACCCCGGTCCTAAACCTGCTGGGTCGCAAGGAAGGGCGTTACCTCGACCTAAGCCTACCGCGTCCATCAAGCAAAACGCAAACGAACGCGTCTAAAAAAGCACAAACTTCTCTCTCTACACACATACACACCGTACACCGTGCGTTATCTGCATGCGAATGGCGGATAAGAAACGAAAACAAAGAGCGAGAAATACTCCCTGCTGCCCCCTGGCGGAAACAGGCGAAANCCACAGGAAACATTCAGNCATAGCCGGCGGAACGTCGTTCGTTCCTGGGAACGTTCGCCGCGACGCTCATTGTGTGCACGTCATATTCATAGCCATCTAGATCTAAAATTAGAAAACCGTAATAGATCNTNGTACTGGCCAAACCTAGTGATGCAAACCCTTGTTCACTCATT]


>consensus_7438#4 AGGCAAGAATCGGCACGATGGAGAGGAATTGATCAAAGATTTCCGCAAAAGCCCTCAGGG TTACACGGATTATGGTATCTACGTAACGGAAGTACACGAAGGTAGCCCAGCGGCGAAATC GGGACTCCGGATGCATGACAAAATTTTGCAGTGCAACGGGTACGATTTCACCATGGTTAC GCACAAGAAGGCGGTTAGCTACATACGGAAAAACCCCGGTCCTAAACCTGCTGGGTCGCA AGGAAGGGCGTTACCTCGACCTAAGCCTACCGCGTCCATCAAGCAAAACGCAAACGAACG CGTCTAAAAAAGCACAAACTTCTCTCTCTACACACATACACACCGTACACCGTGCGTTAT CTGCATGCGAATGGCGGATAAGAAACGAAAACAAAGAGCGAGAAATACTCCCTGCTGCCC CCTGGCGGAAACAGGCGAAANCCACAGGAAACATTCAGNCATAGCCGGCGGAACGTCGTT CGTTCCTGGGAACGTTCGCCGCGACGCTCATTGTGTGCACGTCATATTCATAGCCATCTA GATCTAAAATTAGAAAACCGTAATAGATCNTNGTACTGGCCAAACCTAGTGATGCAAACC CTTGTTCACTCATT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7438#1      --------------------------------AGGCAGAATCGGCACGAGGCGATGTACG 28
consensus_7438#3      ------------------------------------------------------------
consensus_7438#0      AAAAAAAAAATCAAACACCTATGCGTATCGAAAGCAAAGAGCAAAAGGAACCGAGTTTCG 60
consensus_7438#4      ------------------------------------------------------------
consensus_7438#2      ------------------------------------------------------------
                                                                                  

consensus_7438#1      CTGTTTGGCTTGTGGAGCTGTTTGCCCGCCTTGATTTGGAGCACCAATTCCCCATCGAAG 88
consensus_7438#3      -------------------------CCGCGGACGCGTGGG----CAATTCCCCATCGAAG 31
consensus_7438#0      CTGTTTGGCTTGTGGAGCTGTTTGCCCGCCTTGATTTGGAGCACCAATTCCCCATCGAAG 120
consensus_7438#4      ------------------------------------------------------------
consensus_7438#2      -------------------------ACACACAGTCTTACT----CTACTCAGCGTTTTAC 31
                                                                                  

consensus_7438#1      TCCCAGCTGAGCGCGTGTGCGTGTGTGCGTTGTGCGACGTTCCATCAACTACCTCAGGCA 148
consensus_7438#3      TCCCAGCTGAGCGCGTGTGCGTGTGTGTGTTGTGCGACGTTCCATCAACTACCTCAGGCA 91
consensus_7438#0      TCCCAGCTGAGCGCGTGTGCGTGTGTGTGTTGTGCGACGTCCGATCAACTACCTCAGGCA 180
consensus_7438#4      ------------------------------------------------------------
consensus_7438#2      TACTACTACTACTACTACCACTGAACGTAACGTAACATTTTCCGACGGCGCACGGCGGCA 91
                                                                                  

consensus_7438#1      GCTTGGCAGAATGGCAAAGAAAGCGTTCCAGCACCAGGCAGGCACGGCCATGGAGTGTTT 208
consensus_7438#3      GCTTGGCAGAATGGCAAAGAAAGCGTTCCAGCACCAGGCAGGCACGGCCATGGAGTGTTT 151
consensus_7438#0      GCTTGGCAGAATGGCAAAGAAAGCGTTCCAGCACCAGGCAGGCACGGCCATGGAGTGTTT 240
consensus_7438#4      ------------------------------------------------------------
consensus_7438#2      GCTCGATTTTAC----ACGCATTTTTTGCAAAACAGCAGTGGTACGGA-ACAAAAAGGGA 146
                                                                                  

consensus_7438#1      AAGCATTCCCATAACGTTACACAAAGAGAAGGACATTGACGAGGAGGGACGGGAGGTGCT 268
consensus_7438#3      AAGCATTCCCATAACGTTACACAAAGAGAAGGACATTGACGAGGAGGGACGGGAGGTGCT 211
consensus_7438#0      AAGCATTCCCATAACGTTACACAAAGAGAAGGACATTGACGAGGAGGGGCGGGAGGTGCT 300
consensus_7438#4      ------------------------------------------------------------
consensus_7438#2      AATCGTTTTT----TATTGCATATTTCTATTGATTATTTGTAAGCAAAGTGTTTCTAGGT 202
                                                                                  

consensus_7438#1      AAAGTGTGGGTTTAAAATCGGTGGAGGA-ATTGATCAA-GATTTCCGCGAA-AAGCCCTC 325
consensus_7438#3      AAAGTGTGGGTTTAAAATCGGTGGAGGA-ATTGATCAA-GATTTCCGC-AA-AAGCCCTC 267
consensus_7438#0      AAAGTGTGGGTTCAAAATCGGTGGAGGA-ATTGATCAA-GATTTCCGC-AA-AAGCCCCC 356
consensus_7438#4      -AGGCAAGAATCGGCACGATGGAGAGGA-ATTGATCAAAGATTTCCGC-AA-AAGCCCTC 56
consensus_7438#2      ATAATGATAGTATGAACGTGTTAGAGAGTGTTAAACGCCGCTTTCCCGGAGCGGGCGCCC 262
                                *    *       ***    ** * *   * *****   *    ** * *

consensus_7438#1      AGGGTTACACGGATTATGGTATCTACGTAACGGAAGTACACGAAGGTAGCCCAGCGGCGA 385
consensus_7438#3      AGGGTTACACGGATTATGGTATCTACGTAACGGAAGTACACGAAGGTAGTCCAGCGGCGA 327
consensus_7438#0      AGGGTTACACGGATTATGGTATCTACGTAACGGAAGTGCACGAAGGTAGCCCAGCGGCGA 416
consensus_7438#4      AGGGTTACACGGATTATGGTATCTACGTAACGGAAGTACACGAAGGTAGCCCAGCGGCGA 116
consensus_7438#2      ACACTTTCCAGGGGTCAAACTGCCGCGCATTG---GTACTCGTTGCTTATTAGGAGATTC 319
                      *   ** *  **  *       *  ** *  *   ** * **  * *      * *    

consensus_7438#1      AATCGGGACTCCGGATGCATGACAAAATTTTGCAGTGCAAC---GGGTACGATTTCACCA 442
consensus_7438#3      AATCGGGACTCCGGATGCATGACAAAATTTTGCAGTGCAAC---GGGTACGATTTCACCA 384
consensus_7438#0      AATCGGGACTCCGGATGCATGACAAAATTTTGCAGTGCAAC---GGGTACGATTTCACCA 473
consensus_7438#4      AATCGGGACTCCGGATGCATGACAAAATTTTGCAGTGCAAC---GGGTACGATTTCACCA 173
consensus_7438#2      TCCTCTTTTTGTGAGATTTTAGTGCATTTTTAGAGGTCAAAAGAGGATGAGCATTTGTTA 379
                               *  *      *     * ****  **  ***    ** *  *  **    *

consensus_7438#1      TGGTTACGCACAAGAAGGCGGGTTAGCTACATACGGAAAAACCCCG-TCCTAAACCTGCT 501
consensus_7438#3      TGGTTACGCACAAGAAGGCGG-TTAGCTACATACGGAAAAACCCCG-TCCTGAACCTGCT 442
consensus_7438#0      TGGTTACGCACAAGAAGGCGG-TTAGCTACATACGGAAAAACCCCG-TCCTAAACCTGCT 531
consensus_7438#4      TGGTTACGCACAAGAAGGCGG-TTAGCTACATACGGAAAAACCCCGGTCCTAAACCTGCT 232
consensus_7438#2      TGGTTAAATAAAAGGAAA--------------ACAAAAAAAAACAGATTCAAAACACAAC 425
                      ******   * *** *                **  *****  * * * *  ***     

consensus_7438#1      GG-TCGCAAGGAAGGGCGTTACCTCGAGCCTAAGCCTACCGCGTCCATCAAGCAAAAC-G 559
consensus_7438#3      GG-TCGCAAGGAAGGGCGTTACCTCGA-CCTAAGCCTACCGCGTCCATCAAGCAAAAC-G 499
consensus_7438#0      GG-TCGCAAGGAAGGGCGTTACCTCGA-CCTAAGCCTACCGCGTCCATCAAGGAAAAC-G 588
consensus_7438#4      GGGTCGCAAGGAAGGGCGTTACCTCGA-CCTAAGCCTACCGCGTCCATCAAGCAAAAC-G 290
consensus_7438#2      AA-----TAGGGAACACACTACAGCGT-GACGAGCTCTGCATGACAACAAAGCGGAGTTG 479
                              *** *   *  ***  **      ***    *  * * *  ***   *   *

consensus_7438#1      CAAACGAACGC-GTCTAAAAAAAGCACAAACTTCTCTCTCTACACACATACACACCGTAC 618
consensus_7438#3      CAAACGAACGC-GTCCACAAAA-GCACAAACTTCTCTCTCTACACATACACACAC----- 552
consensus_7438#0      CAAACGAACGC-GTCTACAAAA-GCACAAACTTCTCTCTCTACACACATACACACCGTAC 646
consensus_7438#4      CAAACGAACGC-GTCTAAAAAA-GCACAAACTTCTCTCTCTACACACATACACACCGTAC 348
consensus_7438#2      GAAAAGTGTGCTGTGTGAAAGAAGCGTGAAATT---------GAAGGGAAAATTTGATAG 530
                       *** *   ** **    ** * **   ** **          *     * *        

consensus_7438#1      ACCGTGGCGTTATCTGCCATCGCGAATGGCGGGATACGAAACGAGAAAGCAAAGGAGCGA 678
consensus_7438#3      ACCGTG-CGTTATCTGCA--TGCGAATGGCGGATGATAGGAAACGAAAACAAAG-AGCGA 608
consensus_7438#0      ACCGTG-CGTTATCTGCA--TACGAATGGCGG---ATAAGAAACGAAAACAAAG-AGCGT 699
consensus_7438#4      ACCGTG-CGTTATCTGCA--TGCGAATGGCGG---ATAAGAAACGAAAACAAAG-AGCGA 401
consensus_7438#2      AACGT--CGTTAAATATGTTGAGGGTTGGAGGGTGGTTG--AGTGAAAATAAAG------ 580
                      * ***  *****  *        *  *** **            ****  ****      

consensus_7438#1      GAAATACTCCCTGACTGCCCCTGGCCGGANACAGGGCGAAAAGCCACAGGAAACATTCAG 738
consensus_7438#3      GAAATACTCCCTG-CTGCCCCCT------------------------------------- 630
consensus_7438#0      GAAATACTCCCTG-CTGCCCCCTGTCGGAAACAGGC--GAAACCCACAGGAAACATTCCA 756
consensus_7438#4      GAAATACTCCCTG-CTGCCCCCTGGCGGAAACAGGC--GAAANCCACAGGAAACATTCAG 458
consensus_7438#2      ---TTGTTCTTTT-CTTTCATCCAACGGCAACATCCAACACAACAAGGGCAGACAGACAG 636
                          *  **  *  **  *                                         

consensus_7438#1      GCCATACCGGGGCGA--------------------------------------------- 753
consensus_7438#3      ------------------------------------------------------------
consensus_7438#0      TCAGTAAGTAGTAACCCTTCATAGAGAAACTCAGCAGTCTGGGGACATCAAACCATGCCC 816
consensus_7438#4      NCATAGCCGGCGGAACGTCGTTCGTTCCTGGGAACGTTCGCCGCGACGCTCATTGTGTGC 518
consensus_7438#2      CCA--GACAGATAGACAGAGAGAGAGATAC---ACGTACACTGTAGCGACCTTCGTACGG 691
                                                                                  

consensus_7438#1      ------------------------------------------------------------
consensus_7438#3      ------------------------------------------------------------
consensus_7438#0      CTTAGGTTCTCGCATTATACTACAAAGCATTCCATGGCAACAACAGTCTTTGCTGAGAGG 876
consensus_7438#4      ACGTCATATTCATAGCCATCTAGATCTAAAATTAGAAAACCGTAATAGATCNTNGTACTG 578
consensus_7438#2      GATGTGTTCTCGTAGTTTTAAATATGCCGGGTCATCACTT-------------------- 731
                                                                                  

consensus_7438#1      ------------------------------------------------------------
consensus_7438#3      ------------------------------------------------------------
consensus_7438#0      AGAAGAGCTGTATCGTTATCAAGTTGTTTCATAGCAGTAGCTCATCTTTGGTCTAACTAC 936
consensus_7438#4      GCCAAACCTAGTGATGCAAACCCTTGTTCACTCATT------------------------ 614
consensus_7438#2      ------------------------------------------------------------
                                                                                  

consensus_7438#1      ------------------------------------------------------------
consensus_7438#3      ------------------------------------------------------------
consensus_7438#0      GACATCCTCTCGACAAACAGTCTTACTCTACTTAGCGTACTACTACTACTACTACCACTG 996
consensus_7438#4      ------------------------------------------------------------
consensus_7438#2      ------------------------------------------------------------
                                                                                  

consensus_7438#1      ------------------------------------------------------------
consensus_7438#3      ------------------------------------------------------------
consensus_7438#0      AACGTAACGTAACATTTTCCGACGGCACACGGCGGCAGCTCGATTTTACACGCATTTTTA 1056
consensus_7438#4      ------------------------------------------------------------
consensus_7438#2      ------------------------------------------------------------
                                                                                  




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)