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Anopheles gambiae
cluster # 7462 cluster # 7462       Sequences # 7       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7462#0 length = 1056 sequences # 2  
consensus_7462#1 length = 894 sequences # 1  
consensus_7462#2 length = 772 sequences # 3  
consensus_7462#3 length = 706 sequences # 1  

consensusID : consensus_7462#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1056
fasta sequence
                              [CCGATTGCATGTGTGGCATGGCGTTTTTTTTTCCAATCGGTCTTTCTACTATGTGCGCTACACCCAGTATCGAGCTCGATCATACTGGAGGAATGTTCCGAAATGCAGGGCCCCCGCAGCACGGTCATTGCGCTGATCATGATCGTGTCGATATGTTTAATGATATTCTTTATCGTATGCTTCACGTTGCTGTTTTACCTGCTGAAACGGAATGACGATTAACGATAGCTTTATGTGCAGAAGTGTGTTTCCCTGTTTCTATGATTTTTTTTTTTTGTCATTTGTGAGTGAGAATTTACATCTAGATAGGATGAGGATCGTTTTCTTTATGCACCTAGAAGAAGGGAAATATTAATTAAGCAATTCTGTGCGTGTGTAGGTAGACCCGACTGTTCAATCAAATGCTAAGAGGCAAATTTATCAACCATCGAGCGAGTTTAGTTTATTATTTGTGTACTGATTTTTGAGTGGCGAGAACGCATCCTAACCCATATGATAATATGATTGAATTTTAAATAACCTCGCACACAATGGTTTATTCGTTTCTAGTAGTATAGTTTCTTTTGGTAAAAAAACTACGCTCCCATTTAAGAACTTAATGGATTTATTTTAATAAGGGTCCTTTTTTGCAACGGGGTAGTATGAGTGTGTGCTGCTGAAGAAGCGAAATGTAGGAAATGCTGAAGAGAAATGTAGGAAAATGTTTAGTTTGTTTTCTACCCGCCACACACACCACATGTCGACTAACATAACCCAAATACCTCTCTCTCTCTTTCTGTGTATTACCAGTTGATAGGAGATTTTTGTTTTTCATAATAATTTTGATCATGTTGCTATCAGAAACAACTAGCCAATCAGTGCTCCATCAGTGTCACGTTTGCTGTGTGTTGTGTTTTTGGTAACAGTTTCTGCGTGAAAAGCGTGCGCGCGTGTGTGTGTTTTAGCAGCATCCAGCAGCAGCAAACGCAGCAGCAGCAGCAACAACAGCCGGGATGTAATGTTGAGTACTTGCTCTGGTGTACCGGGATCGGATCGATCGACCACTGCACATCTTTT]

[+] EMBL BM639428             [CCGATTGCATGTGTGGCATGGCGTTTTTTTTTCCAATCGGTCTTTCTACTATGTGCGCTACACCCAGTATCGAGCTCGATCATACTGGAGGAATGTTCCGAAATGCAGGGCCCCCGCAGCACGGTCATTGCGCTGATCATGATCGTGTCGATATGTTTAATGATATTCTTTATCGTATGCTTCACGTTGCTGTTTTACCTGCTGAAACGGAATGACGATTAACGATAGCTTTATGTGCAGAAGTGTGTTTCCCTGTTTCTATGATTTTTTTTTTTTGTCATTTGTGAGTGAGAATTTACATCTAGATAGGATGAGGATCGTTTTCTTTATGCACCTAGAAGAAGGGAAATATTAATTAAGCAATTCTGTGCGTGTGTAGGTAGACCCGACTGTTCAATCAAATGCTAAGAGGCAAATTTATCAACCATCGAGCGAGTTTAGTTTATTATTTGTGTACTGATTTTTGAGTGGCGAGAACGCATCCTAACCCATATGATAATATGATTGAATTTTAAATAACCTCGCACACAATGGTTTATTCGTTTCTAGTAGTATAGTTTCTTTTGGTAAAAAAACTACGCTCCCATTTAAGAACTTAATGGATTTATTTTAATAAGGGTCCTTTTTTGCAACGGGGTAGTATGAGTGTGTGCTGCTGAAGAAGCGAAATGTAGGA                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX624914             [                                                                                                                                                                                                                                                                                                                                       TATGCACCTAGAAGAAGGGAAATATTAATTAAGCAATTCTGTGCGTGTGTAGGTAGACCCGACTGTTCAATCAAATGCTAAGAGGCAAATTTATCAACCATCGAGCGAGTTTAGTTTATTATTTGTGTACTGATTTTTGAGTGGCGAGAACGCATCCTAACCCATATGATAATATGATTGAATTTTAAATAACCTCGCACACAATGGTTTATTCGTTTCTAGTAGTATAGTTTCTTTTGGTAAAAAAACTACGCTCCCATTTAAGAACTTAATGGATTTATTTTAATAAGGTTCCTTTTTTGCAACGGGGTAGTATGAGTGTGTGCTGCTGAAGAAGCGAAATGTAGGAAATGCTGAAGAGAAATGTAGGAAAATGTTTAGTTTGTTTTCTACCCGCCACACACACCACATGTCGACTAACATAACCCAAATACCTCTCTCTCTCTTTCTGTGTATTACCAGTTGATAGGAGATTTTTGTTTTTCATAATAATTTTGATCATGTTGCTATCAGAAACAACTAGCCAATCAGTGCTCCATCAGTGTCACGTTTGCTGTGTGTTGTGTTTTTGGTAACAGTTTCTGCGTGAAAAGCGTGCGCGCGTGTGTGTGTTTTAGCAGCATCCAGCAGCAGCAAACGCAGCAGCAGCAGCAACAACAGCCGGGATGTAATGTTGAGTACTTGCTCTGGTGTACCGGGATCGGATCGATCGACCACTGCACATCTTTT]


>consensus_7462#0 CCGATTGCATGTGTGGCATGGCGTTTTTTTTTCCAATCGGTCTTTCTACTATGTGCGCTA CACCCAGTATCGAGCTCGATCATACTGGAGGAATGTTCCGAAATGCAGGGCCCCCGCAGC ACGGTCATTGCGCTGATCATGATCGTGTCGATATGTTTAATGATATTCTTTATCGTATGC TTCACGTTGCTGTTTTACCTGCTGAAACGGAATGACGATTAACGATAGCTTTATGTGCAG AAGTGTGTTTCCCTGTTTCTATGATTTTTTTTTTTTGTCATTTGTGAGTGAGAATTTACA TCTAGATAGGATGAGGATCGTTTTCTTTATGCACCTAGAAGAAGGGAAATATTAATTAAG CAATTCTGTGCGTGTGTAGGTAGACCCGACTGTTCAATCAAATGCTAAGAGGCAAATTTA TCAACCATCGAGCGAGTTTAGTTTATTATTTGTGTACTGATTTTTGAGTGGCGAGAACGC ATCCTAACCCATATGATAATATGATTGAATTTTAAATAACCTCGCACACAATGGTTTATT CGTTTCTAGTAGTATAGTTTCTTTTGGTAAAAAAACTACGCTCCCATTTAAGAACTTAAT GGATTTATTTTAATAAGGGTCCTTTTTTGCAACGGGGTAGTATGAGTGTGTGCTGCTGAA GAAGCGAAATGTAGGAAATGCTGAAGAGAAATGTAGGAAAATGTTTAGTTTGTTTTCTAC CCGCCACACACACCACATGTCGACTAACATAACCCAAATACCTCTCTCTCTCTTTCTGTG TATTACCAGTTGATAGGAGATTTTTGTTTTTCATAATAATTTTGATCATGTTGCTATCAG AAACAACTAGCCAATCAGTGCTCCATCAGTGTCACGTTTGCTGTGTGTTGTGTTTTTGGT AACAGTTTCTGCGTGAAAAGCGTGCGCGCGTGTGTGTGTTTTAGCAGCATCCAGCAGCAG CAAACGCAGCAGCAGCAGCAACAACAGCCGGGATGTAATGTTGAGTACTTGCTCTGGTGT ACCGGGATCGGATCGATCGACCACTGCACATCTTTT



consensusID : consensus_7462#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 894
fasta sequence
                              [TTAAAGATAATTTTTCGCGACAAAACAAAGTGTATAACTGAGTTTTCTGTACAGTTGCCTGGGTAGTTATGGCAGATTGAACGTGCTACAATCTAGAAAAGTTTCAGGAAGGTTATAAAAATTACATNCCACTACCCATATCGACACTTCACAAGTAAACAGTTCGCAAACACACACGGTGCGGGNACAGGACAGACAGGACGAAGCCAGAGAACNCAAGCGGAAGTAACTGGTNGCTTGNTNGGGCTCATGCCCCGGAAAAGGAAGACNGCAAAANACTTTACAGCGACCGGCTAAANTGCTAATCACCCGGCGCTCACGGGANCACAACCCNNTTNGAACAGCTTGGGGAGCTTATACCTACTCTGGCCCCACTGGCTTGGGAACANGGCTTCCNACTTAACAAATGGGCCCTTGGACACATGACTGACCCAAAGAGTGGTGCANACAAGCTANCTGGGACCTTCCGNCGTCCACAAAANACTCNACACGATNCAGACAAACAGGGCCTATANCCCAAGCGCACCTTTGGCNCNCTAAATCNGGCACAACNAACACCAACCAGCCGACAGAAAAACNCGGGNAACAAATTTCCTGATGNATGTGTGGACCCCCANGGAGTAAGNAACAATTTGCCAATTCGTCGGCGTGGCCATACNTGGGAANNTTTCCCAGCACACACCCGGGGCTTACCCCGTNAAACGTAAGCTTACCATATAAGTTTANCTTNCTAGTAACGNNACCGTTACACGTACCGCAGAAACCCGCAACAGTNTATGTACACACCACCACGGANGGGATACTACCCCGTGATGGTCATATGCNCATGTGAGGNAATCANCGCCAAGNGGACTGGNCCANGGTTCNGCACAGAGAGTGATCNCCAGGGAGCTG]

[+] EMBL AL696147             [TTAAAGATAATTTTTCGCGACAAAACAAAGTGTATAACTGAGTTTTCTGTACAGTTGCCTGGGTAGTTATGGCAGATTGAACGTGCTACAATCTAGAAAAGTTTCAGGAAGGTTATAAAAATTACATNCCACTACCCATATCGACACTTCACAAGTAAACAGTTCGCAAACACACACGGTGCGGGNACAGGACAGACAGGACGAAGCCAGAGAACNCAAGCGGAAGTAACTGGTNGCTTGNTNGGGCTCATGCCCCGGAAAAGGAAGACNGCAAAANACTTTACAGCGACCGGCTAAANTGCTAATCACCCGGCGCTCACGGGANCACAACCCNNTTNGAACAGCTTGGGGAGCTTATACCTACTCTGGCCCCACTGGCTTGGGAACANGGCTTCCNACTTAACAAATGGGCCCTTGGACACATGACTGACCCAAAGAGTGGTGCANACAAGCTANCTGGGACCTTCCGNCGTCCACAAAANACTCNACACGATNCAGACAAACAGGGCCTATANCCCAAGCGCACCTTTGGCNCNCTAAATCNGGCACAACNAACACCAACCAGCCGACAGAAAAACNCGGGNAACAAATTTCCTGATGNATGTGTGGACCCCCANGGAGTAAGNAACAATTTGCCAATTCGTCGGCGTGGCCATACNTGGGAANNTTTCCCAGCACACACCCGGGGCTTACCCCGTNAAACGTAAGCTTACCATATAAGTTTANCTTNCTAGTAACGNNACCGTTACACGTACCGCAGAAACCCGCAACAGTNTATGTACACACCACCACGGANGGGATACTACCCCGTGATGGTCATATGCNCATGTGAGGNAATCANCGCCAAGNGGACTGGNCCANGGTTCNGCACAGAGAGTGATCNCCAGGGAGCTG]


>consensus_7462#1 TTAAAGATAATTTTTCGCGACAAAACAAAGTGTATAACTGAGTTTTCTGTACAGTTGCCT GGGTAGTTATGGCAGATTGAACGTGCTACAATCTAGAAAAGTTTCAGGAAGGTTATAAAA ATTACATNCCACTACCCATATCGACACTTCACAAGTAAACAGTTCGCAAACACACACGGT GCGGGNACAGGACAGACAGGACGAAGCCAGAGAACNCAAGCGGAAGTAACTGGTNGCTTG NTNGGGCTCATGCCCCGGAAAAGGAAGACNGCAAAANACTTTACAGCGACCGGCTAAANT GCTAATCACCCGGCGCTCACGGGANCACAACCCNNTTNGAACAGCTTGGGGAGCTTATAC CTACTCTGGCCCCACTGGCTTGGGAACANGGCTTCCNACTTAACAAATGGGCCCTTGGAC ACATGACTGACCCAAAGAGTGGTGCANACAAGCTANCTGGGACCTTCCGNCGTCCACAAA ANACTCNACACGATNCAGACAAACAGGGCCTATANCCCAAGCGCACCTTTGGCNCNCTAA ATCNGGCACAACNAACACCAACCAGCCGACAGAAAAACNCGGGNAACAAATTTCCTGATG NATGTGTGGACCCCCANGGAGTAAGNAACAATTTGCCAATTCGTCGGCGTGGCCATACNT GGGAANNTTTCCCAGCACACACCCGGGGCTTACCCCGTNAAACGTAAGCTTACCATATAA GTTTANCTTNCTAGTAACGNNACCGTTACACGTACCGCAGAAACCCGCAACAGTNTATGT ACACACCACCACGGANGGGATACTACCCCGTGATGGTCATATGCNCATGTGAGGNAATCA NCGCCAAGNGGACTGGNCCANGGTTCNGCACAGAGAGTGATCNCCAGGGAGCTG



consensusID : consensus_7462#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 772
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGAATTATCAGTGCAGAAAAGATAAATTTTTCGCGACAAAAACAAAAGTGTATAACTGAATCTTTCTGTACAGCTTGCCGGGTAGTTTGGCAGATTGAACGTGCTACAATCTGGAAAAGTTGCAGGAAGTTTATACAAATTA-CGGTCCACTACCCATACTCGACCTTCAAAGAAACATTCGCAAAACCGTGCGGTACAGCAGCAGCAGCAGCAGCAGCAGCACCGAGTATGTGTGTGGTTGCCGAAAGACCGCAAAATTAAGACGTAATCTTTCCGCTCCGGACAACTGAAGTGGATTATTGCAATTGAAGTCGTACAGCTGCCGCGCAGTGCAATTTGATCGCAAACACTTTAGGCTTTCAGCTTGCTTTCGAAAACACCCGAAACGATCGTGGCCGTGATCATCGGTTGATCACCGTCTATATCTATATTTTCTACCAACCATTTCTACCGGTTCCGGTGCGGACCAGCGCGCAGGCCGTCAAAATTAGTGGCGAAACACGAGTACGCAAAATGTCCCTCAGCTCGGACTCGCCGGATGCGAAAAAGCCCTGCAAGGGCAT-CCTCAAGTCCTCCAGCAGCTTCGACAAGCATTCGGCGGCATCGTCTGTGCACAGGAAAAGTGCAAAGTTTGATGAGCTCAATGTGCTGCAGACGCACCACCCGCCCGATAAAGATTACGGGCACAT-GAAGGTGGACGAGCCGAAGACGCCCTACAACTACGTAGAATCGGACGACGTTGATCAA]

[+] EMBL BM618664             [CCGCCCACGCGTCCGCCCACGCGTCCGAATTATCAGTGCAGAAAAGATAAATTTTTCGCGACAAAAACAAAAGTGTATAACTGAATCTTTCTGTACAGCTTGCCGGGTAGTTTGGCAGATTGAACGTGTTACAATCTGGAAAAGTTGCAGGAATTTTATACAAATTA CGGTCCACTACCCATACTATACCTTCAAAGAAACATTCGCAAAACCGTGCGGTACAGCAGCAGCAGCAGCAGCAGCAGCACCGAGTATGTGTGTGGTTGCCGAAAGACCGCAAAATTAAGACGTAATCTTTCCGCTCCGGACAACTGAAGTGGATTATTGCAATTGAAGTCGTACAGCTGCCGCGCAGTGCAATTTGATCGCAAACACTTTAGGCTTTCAGCTTGCTTTCGAAAACACCCGAAACGATCGTGGCCGTGATCATCGGTTGATCACCGTCTATATCTATATTTTCTACCAACCATTTCTACCGGTTCCGGTGCGGACCAGCGCGCAGGCCGTCAAAATTAGTGGCGAAACACGAGTACGCAAAATGTCCCTCAGCTCGGACTCGCCGGATGCGAAAAAGCCCTGCAAGGGCATACCTCAAGTCCTCCAG                                                                                                                                                                          ]
[+] EMBL BM639347             [                        CCGAATTATCAGTGCAGAAAAGATAAATTTTTCGCGACAAAAACAAAAGTGTATAACTGAGTCTTTCCGTACAGCTTGCCGGGTAGTTTGGCAGATTGAACGTGCTACAATCTAGAAAAGTTTCAGGAAGGTTATAAAAATTACCACTCCACTACCCATACTCGACCTTCAAAGAAACATTCGCAAAACCGTGCGGTACAGCAGCAGCAGCAGCA    C  CACCGAGTATGTGTGTGGTTGCCGAAAGACCGCAAAATTAAGACGTAATCTTTCCGCTCCGGACAACTGAAGTGGATTATTGCAAGTGAAGTCATACAGCTGCCGCGCAGTGCAATTTGATCGCAAACACTTTAGGCTTTCAGCTTGCTTTCGAAAACACGCGAAACGATCGTGGCCGTGATCATCGGTTGATCACCGTCTATATCTATATTTTCTACCAACCATTT AACCGGTTCCGGTGCGGACCAGCGCGCAGGCCGTCAAAATTAGTGGCGAAACACGAGTACGCAAAATGTCCCTCAGCTCGGACTCGCCGGATGCGAAAAAGCCCTGCAAGGGCAT CCTCAAGTCCTCCAGCAGCTTCGACAAGCATTCGGCGGCATCGTCTGTGCACAGGAAAAGTGCAAAGTTTGATGAGCTCAATGTGCTGCAGACGCACCACCCGCCCGATAAAGATTACGGGCACAT GAAGGTGGACGAGCCGA                                         ]
[+] EMBL BM593016             [                                                            ccgAAAACAGAAGTGTATAACTGAATCTTTCTGTACAGCTTGCCGGGTAGTTTGGCAGATTGAACGTGCTACAATCTGGATAAGTTGCAGGAAGTTTATACAAATTA CGGTCCACTACCCATACTCGACCTTCAAAGAAACATTCGCAAAACCGTGCGGTACAGCAG A  TGCAGCAGCAGCAGCACCGAGTATGTGTGTGGTTGCCGAAAGACCGCAAAATTAAGACGTAATCTTTCCGCTCCGGACAACTGAAGTGGATTATTGCAATTGAAGTCGTACAGCTGCCGCGAAGTGCAATTTGATCGCAAACACTTTAGGCTTTCAGCTTGCTTTAGAAAACACCCGAAACGATCGTGGCCGTGATCATCGGTTGATCACCGTCTATATCTATATTTTCTACCAACCATTTCTACCGGTTCCGGTGCGGACCAGCGCGCAGGCCGTCAAAATTAGTGGCGAAACACGAGTACGCAAAATGTCCCTCAGCTCGGACTCGCCGGATGCGAAAAAGCCCTGCAAGGGCAT CCTCAAGTCCTCCAGCAGCTTCGACAAGCATTCGGCGGCATCGTCAGTGCACAGGAAAAGTGCAAAGTTTGATGAGCTCAATGTGCTGCAGACGCACCACCCGCCCGATAAAGATTACGGCCACATGGAAGGTGGACGAGCCGAAGACGCCCTACAACTACGTAGAATCGGACGACGTTGATCAA]


>consensus_7462#2 CCGCCCACGCGTCCGCCCACGCGTCCGAATTATCAGTGCAGAAAAGATAAATTTTTCGCG ACAAAAACAAAAGTGTATAACTGAATCTTTCTGTACAGCTTGCCGGGTAGTTTGGCAGAT TGAACGTGCTACAATCTGGAAAAGTTGCAGGAAGTTTATACAAATTACGGTCCACTACCC ATACTCGACCTTCAAAGAAACATTCGCAAAACCGTGCGGTACAGCAGCAGCAGCAGCAGC AGCAGCACCGAGTATGTGTGTGGTTGCCGAAAGACCGCAAAATTAAGACGTAATCTTTCC GCTCCGGACAACTGAAGTGGATTATTGCAATTGAAGTCGTACAGCTGCCGCGCAGTGCAA TTTGATCGCAAACACTTTAGGCTTTCAGCTTGCTTTCGAAAACACCCGAAACGATCGTGG CCGTGATCATCGGTTGATCACCGTCTATATCTATATTTTCTACCAACCATTTCTACCGGT TCCGGTGCGGACCAGCGCGCAGGCCGTCAAAATTAGTGGCGAAACACGAGTACGCAAAAT GTCCCTCAGCTCGGACTCGCCGGATGCGAAAAAGCCCTGCAAGGGCATCCTCAAGTCCTC CAGCAGCTTCGACAAGCATTCGGCGGCATCGTCTGTGCACAGGAAAAGTGCAAAGTTTGA TGAGCTCAATGTGCTGCAGACGCACCACCCGCCCGATAAAGATTACGGGCACATGAAGGT GGACGAGCCGAAGACGCCCTACAACTACGTAGAATCGGACGACGTTGATCAA



consensusID : consensus_7462#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 706
fasta sequence
                              [CCGCCCACGCGTCCGATCGTCAGTGCACAGGAAAAGTGCAAAGTTTGATGAGCTCAATGTGCTGCAGACGCACCACCCGCCCGATAAAGATTACGGCCACATGAAGGTGGACGAGCCGAAGACGCCCTACAACTACGTAGAATCGGACGACGTTGATCAATTGGATGCTGAGCTGCTCGCCGAAAGATTACGTGCGGCCGATGCACGGAGCGATGCCGTCTCGGAGGAGGACCTGGACGATGACGACGACGATGAGGAGGAGGAGGAGCTGACGGAGGAGCAGAAAAAGCGCAAGCTAGAGTTTGAGCGACGCCGCAAAGCGCACTATAACGAGTTCGAGGCGATCAAGCTCGCCCGCAAGCTGATCGAGGAGGACGATGAGGAGGACGAGGACGAGGATGGTGAGGAGCAGCGGAACAAAGCGACCGGCTCGTCGTCGTCGTCGGGCCCGAGCACAGTGAACCCTGCCGGTGCGATTGCGGTGACCGGCAAGGAGGAAACCGGCATGGAAATTGAGGAGATCGAGGAAGCGAGCGGGCGCACGGCGAAGACGGCCGATAGTCCGGTGGCACGGTTAAAACCAGTATCGAGCTCGATCATACTGGAGGAATGTTCCGAAATGCAGGGCCCCCGCAGCTCGGTCATTGCGCTGATCATGATCGTGTCGATATGTTTAATGATTTTCTTTATCGTATGCTTCACGTTG]

[+] EMBL BM647328             [CCGCCCACGCGTCCGATCGTCAGTGCACAGGAAAAGTGCAAAGTTTGATGAGCTCAATGTGCTGCAGACGCACCACCCGCCCGATAAAGATTACGGCCACATGAAGGTGGACGAGCCGAAGACGCCCTACAACTACGTAGAATCGGACGACGTTGATCAATTGGATGCTGAGCTGCTCGCCGAAAGATTACGTGCGGCCGATGCACGGAGCGATGCCGTCTCGGAGGAGGACCTGGACGATGACGACGACGATGAGGAGGAGGAGGAGCTGACGGAGGAGCAGAAAAAGCGCAAGCTAGAGTTTGAGCGACGCCGCAAAGCGCACTATAACGAGTTCGAGGCGATCAAGCTCGCCCGCAAGCTGATCGAGGAGGACGATGAGGAGGACGAGGACGAGGATGGTGAGGAGCAGCGGAACAAAGCGACCGGCTCGTCGTCGTCGTCGGGCCCGAGCACAGTGAACCCTGCCGGTGCGATTGCGGTGACCGGCAAGGAGGAAACCGGCATGGAAATTGAGGAGATCGAGGAAGCGAGCGGGCGCACGGCGAAGACGGCCGATAGTCCGGTGGCACGGTTAAAACCAGTATCGAGCTCGATCATACTGGAGGAATGTTCCGAAATGCAGGGCCCCCGCAGCTCGGTCATTGCGCTGATCATGATCGTGTCGATATGTTTAATGATTTTCTTTATCGTATGCTTCACGTTG]


>consensus_7462#3 CCGCCCACGCGTCCGATCGTCAGTGCACAGGAAAAGTGCAAAGTTTGATGAGCTCAATGT GCTGCAGACGCACCACCCGCCCGATAAAGATTACGGCCACATGAAGGTGGACGAGCCGAA GACGCCCTACAACTACGTAGAATCGGACGACGTTGATCAATTGGATGCTGAGCTGCTCGC CGAAAGATTACGTGCGGCCGATGCACGGAGCGATGCCGTCTCGGAGGAGGACCTGGACGA TGACGACGACGATGAGGAGGAGGAGGAGCTGACGGAGGAGCAGAAAAAGCGCAAGCTAGA GTTTGAGCGACGCCGCAAAGCGCACTATAACGAGTTCGAGGCGATCAAGCTCGCCCGCAA GCTGATCGAGGAGGACGATGAGGAGGACGAGGACGAGGATGGTGAGGAGCAGCGGAACAA AGCGACCGGCTCGTCGTCGTCGTCGGGCCCGAGCACAGTGAACCCTGCCGGTGCGATTGC GGTGACCGGCAAGGAGGAAACCGGCATGGAAATTGAGGAGATCGAGGAAGCGAGCGGGCG CACGGCGAAGACGGCCGATAGTCCGGTGGCACGGTTAAAACCAGTATCGAGCTCGATCAT ACTGGAGGAATGTTCCGAAATGCAGGGCCCCCGCAGCTCGGTCATTGCGCTGATCATGAT CGTGTCGATATGTTTAATGATTTTCTTTATCGTATGCTTCACGTTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7462#1      ------------------------------------------------------------
consensus_7462#2      ------------------------------------------------------------
consensus_7462#3      ------------------------------------------------------------
consensus_7462#0      CCGATTGCATGTGTGGCATGGCGTTTTTTTTTCCAATCGGTCTTTCTACTATGTGCGCTA 60
                                                                                  

consensus_7462#1      -----------------------------------------------TTAAA-----GAT 8
consensus_7462#2      ---CCGCCCACGCGTCCGCCCACGCGTCCGAATTA----TCAGTGCAGAAAA-----GAT 48
consensus_7462#3      ---CCGCCCACGCGTCCGATCGTCAGTGCACAGGA----AAAGTGCAAAGTTT----GAT 49
consensus_7462#0      CACCCAGTATCGAGCTCGATCATACTGGAGGAATGTTCCGAAATGCAGGGCCCCCGCAGC 120
                                                                                  

consensus_7462#1      AA-TTTTTCGCGACAAAAC--AAAGTGTATAACTGAGT-TTTCTGTACAG-TTGCCTGGG 63
consensus_7462#2      AAATTTTTCGCGACAAAAACAAAAGTGTATAACTGAATCTTTCTGTACAG-CTTGCCGGG 107
consensus_7462#3      GAGCTCAATGTGCTGCAGAC-GCACCACCCGCCCGATAAAGATTACGGCC-ACATGAAGG 107
consensus_7462#0      ACGGTCATTGCGCTGATCATGATCGTGTCGATATGTTTAATGATATTCTTTATCGTATGC 180
                          *    * *                      *        *              * 

consensus_7462#1      TAGTTATGGCAGATTGAACGTGCTACAATCTAGAAAAGTTTCAGGAAGGTTATAAAAATT 123
consensus_7462#2      TAGTT-TGGCAGATTGAACGTGCTACAATCTGGAAAAGTTGCAGGAAGTTTATACAAATT 166
consensus_7462#3      TGGACGAGCCGAA---GACGCCCTACAACTACGTAGAATCGGACGACGTTGATCAATTGG 164
consensus_7462#0      TTCACGTTGCTGTTT-TACCTGCTGAAACGGAATGACGATTAACGATAGCTTTATGTGCA 239
                      *        *       **   **  **              * **      *       

consensus_7462#1      ACATNCCACTACCCATATCGACACTTCAC---AAGTAAACAGTTCGCAAACACACACGGT 180
consensus_7462#2      ACGGTCCACTACCCATACTCGACCTTC-----AAAGAAACA-TTCGCAAAACCGTGCGGT 220
consensus_7462#3      ATGCTGAGCTGCTC--GCCGAAAGATTAC---GTGCGGCCGATGCACGGAGCGATGCCGT 219
consensus_7462#0      GAAGTGTGTTTCCCTGTTTCTATGATTTTTTTTTTTTGTCATTTGTGAGTGAGAATTTAC 299
                               * * *           *             *  *                 

consensus_7462#1      GCGGGNACAGGACAGACAGGACGAAGCCAGAGAACNCAAGCGGAAGTAACTGGTNGCTTG 240
consensus_7462#2      ACAGCAGCAGCAGCAGCAGCAGCAGCACCGAGTATGTGTG----------TGGTTGCCGA 270
consensus_7462#3      CTCGGAGGAGGACCTGGACGATGACGACGACGATGAGGAGGAGGAG----GAGCTGACGG 275
consensus_7462#0      ATCTAGATAGGATGAGGATCGTTTTCTTTATG-CACCTAGAAGAAGGGAAATATTAATTA 358
                              ** *     *             *       *                    

consensus_7462#1      NTNGGGCTCATGCCCCGGAAAAGGAAGACNGCAAAANACTTTACAGCGACCGGCTAAANT 300
consensus_7462#2      AAGA----------CCGCAAAATTAAGACG--TAATCTTTCCGCTCCGGACAACTGAAGT 318
consensus_7462#3      AGGAG---------CAGAAAAAGCGCAAGC--TAGAGTTTGAGCGACG--CCGC-AAAGC 321
consensus_7462#0      AGCAATT-------CTGTGCGTGTGTAGGTAGACCCGACTGTTCAATCAAATGCTAAGAG 411
                                    * *                      *   *         *  *   

consensus_7462#1      GCTAATCACCCGGCGCTCACGGGANCACAAC-----CCNNTTNGAACAGCTTGGGGAGCT 355
consensus_7462#2      G--GATTATT--GCAATTGAAGTCGTACAGCTG---CCGCGCAGTGCAATTTGA-----T 366
consensus_7462#3      GC--ACTATAACGAGTTCGAGGCGATCAAGCTC---GCCCGCAAGCTGATCGAGGAGGAC 376
consensus_7462#0      GCAAATTTATCAACCATCGAGCGAGTTTAGTTTATTATTTGTGTACTGATTTTTGAG--T 469
                      *   *           *           *                               

consensus_7462#1      TATACCTACTCTGGCCCCACTGGCTTGGGAACANGGCTTCCNACTTAACAAATGGGCCCT 415
consensus_7462#2      CGCAAACACTTTAGGCTTTC-AGCTTGCTTTCGAAAACACCCGA--AACGATCGTGGCCG 423
consensus_7462#3      GATGAGGAGGACGAGG--ACGAGGATGGTGAGGAGCAGCGGAACAAAGCGACCG-GCTCG 433
consensus_7462#0      GGCGAGAACG-CATCCTAACCCATATGATAATATGATTGAATTTTAAATAACCTCGCACA 528
                             *           *     **                   *   *    *  * 

consensus_7462#1      TGGACACATGACTGACCCAA--AGAGTGGTGCANACAAGCTANCTGGGACCTTCCGNCGT 473
consensus_7462#2      TGATCAT-CGGTTGATCACC--GTCTATATCTATATTTTCTACCAACCATTTCTACCGGT 480
consensus_7462#3      TCGTCGT--CGTCGGGCCCG--AGCACAGTGAACCCTGCCGGTGCGATTGCGGTGACCGG 489
consensus_7462#0      CAATGGTTTATTCGTTTCTAGTAGTATAGTTTCTTTTGGTAAAAAAACTACGCTCCCATT 588
                                   *               *                              

consensus_7462#1      CCACAAAANACTCNACACGATNCAGA--------CAAACAGGGCCTATANCCC--AAGCG 523
consensus_7462#2      TCCGGTGCGGACCAGCGCG---CAGG--------CCGTCAAAATTAGTGGCG---AAACA 526
consensus_7462#3      CAAGGAGGAAACCGGCATG---GAAA--------TTGAGGAGATCGAGGAAGC--GAGCG 536
consensus_7462#0      TAAGAACTTAATGGATTTATTTTAATAAGGGTCCTTTTTTGCAACGGGGTAGTATGAGTG 648
                                             *                                *   

consensus_7462#1      CACCTTTGGCNCNCTAAATCNGGCACAACNAACACCAAC-CAGCCGACAGAAAAACNCGG 582
consensus_7462#2      CG-----AGTACGCAAAATGTCCCTCAGCTCGGACTCGC-CGGATG-CGAAAAAGCCCTG 579
consensus_7462#3      GGC-----GCACGGCGAAGACGGCCGATAGTCCGGTGGCACGGTTAAAACCAGTATCGAG 591
consensus_7462#0      TGTGCTGCTGAAGAAGCGAAATGTAGGAAATGCTGAAGAGAAATGTAGGAAAATGTTTAG 708
                                                                         *       *

consensus_7462#1      GNAACAAA-TTTCCTGATGNATGTGTGGA-----CCCC-CANGGAGTAAGNAACAATTTG 635
consensus_7462#2      CAAGGGCA-TCCTCAAGTCCTCCAGCAGC-----TTCGACAAGCATTCGGCGGCATCGTC 633
consensus_7462#3      CTCGATCA-TACTGGAGGAATGTTCCGAA-----ATG--CAGGGCCCCCGCAGCTCGGTC 643
consensus_7462#0      TTTGTTTTCTACCCGCCACACACACCACATGTCGACTAACATAACCCAAATACCTCTCTC 768
                               *                             **            *    * 

consensus_7462#1      CCAATTCGTCGGCGTGGCCATACNTGGGAANNTTTCCCAGC-ACACACCCGGGGCTTACC 694
consensus_7462#2      TGTGCACAGGAAAAGTGCAAAGTTTGATGAGCTCAATGTGCTGCAGACGCACCACCCGCC 693
consensus_7462#3      ATTGCGC-TGATCATGATCGTG-TCGATATGTTTAATGATTTTCTTTATCGTATGCTTCA 701
consensus_7462#0      TCTCTTTCTGTGTATTACCAGTTGATAGGAGATTTTTGTTTTTCATAATAATTTTGATCA 828
                                                      *          *              * 

consensus_7462#1      CCGTNAAACGTAAGCTTACCATATAAGTTTANCTTNCTAGTAACGNNACCGTTACACGTA 754
consensus_7462#2      CGATAAAGATTACGGGCAC-ATG-AAGGTGGACGAGCCGAAGACGCC----CTACAACTA 747
consensus_7462#3      CGTTG------------------------------------------------------- 706
consensus_7462#0      TGTTGCTATCAGAAACAAC--TAGCCAATCAGTGCTCCATCAGTGTCACGTTTGCTGTGT 886
                         *                                                        

consensus_7462#1      CCGCAGAAACCCGCAACAGTNTATGTACACACCACCACGGANGGGATACTACCCCGTGAT 814
consensus_7462#2      C-GTAGAATCGGACGAC-GTTGATCAA--------------------------------- 772
consensus_7462#3      ------------------------------------------------------------
consensus_7462#0      GTTGTGTTTTTGGTAACAGTTTCTGCGTGAAAAGCGTGCGCGCGTGTGTGTGTTTTAGCA 946
                                                                                  

consensus_7462#1      GGTCATATGCNCATGTGAGGNAATCANCGCCAAGNGGACTGGNCCANGGTTCNGCACAGA 874
consensus_7462#2      ------------------------------------------------------------
consensus_7462#3      ------------------------------------------------------------
consensus_7462#0      GCATCCAGCAGCAGCAAACGCAGCAGCAGCAGCAACAACAGCCGGGATGTAATGTTGAGT 1006
                                                                                  

consensus_7462#1      GAGTGATCNCCAGGGAGCTG------------------------------ 894
consensus_7462#2      --------------------------------------------------
consensus_7462#3      --------------------------------------------------
consensus_7462#0      ACTTGCTCTGGTGTACCGGGATCGGATCGATCGACCACTGCACATCTTTT 1056
                                                                        




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)