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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7498#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 807 fasta sequence
[CCGAGATCATCGCACACGAAGCGGACGTCTTTATCCTTTCGAGAGCTTTGGGCTTGTTGCGTTGCCTACTTTGCACTGTTGTCGTCGTTGTTGTTTGATCAGTTTGTCGCGTGTGTATAGAGCAAGCCAAAATGGTGCCAAAATCTTTGCTGCTCGTGTGCTTGATCGCGATCGGTGTTAGCAGCGTGCTGGCGGATGTTTCTCACATCGCCCCACCGCAACAACAGCTTGAGGATCCGGTCACCGACGTGTGCCTGTCCTGCATCTGTGAGGCTTCGTCCGGTTGTGATGCTTCCCTGCGCTGCAGCGGTGACGTGTGCGGGATGTTCGCCATCACCTGGGCGTACTGGGCCGATGCCGGCAAGCCCGTCCAGCAGGGTGATTCACCCGACTCGCAGAATGCGTACGCGAACTGCGCCAATGAACCGTACTGTGCGGCCCGGACCGTCCAGGGCTACATGAGGAAGTTTGGACAGGACTGCAATGGTGACGGTCGGATCGATTGCTTCGATCACGCGATCGTCCACAAGCTGGGAGGCTACAACTGCAAGAACACGGTACCGATCGTCTACCAGTCCAAGATCGACGAATGCATCCAGCGAAAGGCAAACGAGTACAGTGCGGCACGTCAGTAAAG--CGTGGTCTTCTCTTTTTTTTTCTTATTTAATTTGCTAATTTTAATACACATCACGTAAGGCTCTCCTTCGCTTCTTTAAAGTCGAAATCTGAAAAAAGAGCATTGATTTGAAGAAAGATGTTTCACGTCAACAGTTTTATTCATTTTCTTTCGAAATACATAAAAGTAAA]
[+] EMBL BM600380 [CCGAGATCATCGCACACGAAGCGGACGTCTTTATCCTTTCGAGAGCTTTGGGCTTGTTGCGTTGCCTACTTTGCACTGTTGTCGTCGTTGTTGTTTGATCAGTTTGTCGCGTGTGTATAGAGCAAGCCAAAATGGTGCCAAAATCATTGCTGCTCGTGTGCTTGATCGCGATCGGTGTTAGCAGCGTGCTGGCGGATGTTTCTCACATCGCCCCACCGCAACAACAGCTTGAGGATCCGGTCACCGACGTGTGCCTGTCCTGCATCTGTGAGGCTTCGTCCGGTTGTGATGCTTCCCTGCGCTGCAGCGGTGACGTGTGCGGGATGTTCGCCATCACCTGGGCGTACTGGGCCGATGCCGGCAAGCCCGTCCAGCAGGGTGATTCACCCGACTCGCAGAATGCGTACGCGAACTGCGCCAATGAACCGTACTGTGCGGCCCGGACCGTCCAGGGCTACATGAGGAAGTTTGGACAGGACTGCAATGGTGACGGTCGGATCGATTGCTTCGATCACGCGATCGTCCACAAGCTGGGAGGCTACAACTGCAAGAACACGGTACCGATCGTCTACCAGTCCAAGATCGACGAATGCATCCAGCGAAAGGCAAACGAGTACAGTGCGGCACGTCAGTAAAG CGTGGTCTTCTCTTTTTTTTTCTTATTTAATTTGCTAATTTTAATACACATCACGTAAGGATC ]
[+] EMBL BX625637 [ ACACGAAGCGGACGTCTTTATCCTTTCGAGAGCTTTGGGCTTGTTGCGTTGCCTACTTTGCACTGTTGTCGTCGTTGTTGTTTGATCAGTTTGTCGCGTGTGTATAGAGCAAGCCAAAATGGTGCCAAAATCATTGCTGCTCGTGTGCTTGATCGCGATCGGTGTTAGCAGCGTGCTGGCGGATGTTTCTCACATCGCCCCACCGCAACAACAGCTTGAGGATCCGGTCACCGACGTGTGCCTGTCCTGCATCTGTGAGGCTTCGTCCGGTTGTGATGCTTCCCTGCGCTGCAGCGGTGACGTGTGCGGGATGTTCGCCATCACCTGGGCGTACTGGGCCGATGCCGGCAAGCCCGTCCAGCAGGGTGATTCACCCGACTCGCAGAATGCGTACGCGAACTGCGCCAATGAACCGTACTGTGCGGCCCGGACCGTCCAGGGCTACATGAGGAAGTTTGGACAGGACTGCAATGGTGACGGTCGGATCGATTGCTTCGATCACGCGATCGTCCACAAGCTGGGAGGCTACAACTGCAAGAACACGGTACCGATCGTCTACCAGTCCAAGATCGACGAATGCATCCAGCGAAAGGCAAACGAGTACAGTGCGGCACGTCAGTAAAG CGTGGTCTTCTCTTTTTTTTTCTTATTTAATTTGCTAATTTTAATACACATCACGTAAGGTTCTCCTTCGCTTCTTTAAAGTCGAAATCTGAAATAAGAGCATTGATTTGAANAAAGATGTTTCACGTCAACAGTTTTATTCATTTTCTTTCGAAATACATAAAA ]
[+] EMBL BX621605 [ TGCGTTGCCTACTTTGCATTGTTGTCGTCGTTGTTGTTTGATCAGTTTGTCGCGTGTGTATAGAGCAAGCCAAAATGGTGCCAAAATCTTTGCTGCTCGTGTGCTTGATCGCGATCGGTGTTAGCAGCGTGCTGGCGGATGTTTCTCACATCGCCCCACCGCAACAACAGCTTGAGGATCCGGTCACCGACGTGTGCCTGTCCTGCATCTGTGAGGCTTCGTCCGGTTGTGATGCTTCCCTGCGCTGCAGCGGTGACGTGTGCGGGATGTTCGCCATCACCTGGGCGTACTGGGCCGATGCCGGCAAGCCCGTCCAGCAGGGTGATTCTCCCGACTCGCAGAATGCGTACGCGAACTGCGCCAATGAACCGTACTGTGCGGCCCGAACCGTCCAGGGCTACATGAGGAAGTTTGGACAGGACTGCAATGGTGACGGTCGGATCGATTGCTTCGATCACGCGATCGTCCACAAGCTGGGAGGCTACAACTGCAAAAACGCGGTACCGATCGTCTACCAGTCCAAGATCGACGAATGCATCCAGCGAAAGGCGATCGAGTACAGTGCGGCACGTCAGTAAAG CGTGGTCTTCTC TTTTTTTTCTTATTTAATTTGCTAATTTTAATACACATCACGTAAGGCTCTCCTTCGCTTCTTTAAAGTAGAAATCTGAAAAAAGAGCATTGATTTGAAGAAAGATGNTTCACGTCAACAGTTTTATACGTTTTCTTTC ]
[+] EMBL BX613546 [ ACTGTAGTCGTCGTTGTTGTTTGATCATTTTGTCGCGTGTGTATAGAGCAAGCCAAAATGGTGCCAAAATCTTTGCTGCTCGTGTGCTTGATCGCGATCGGTGTTAGCAGCGTGCTGGCGGATGTTTCTCACATCGCCCCACCGCAACAACAGCTTGAGGATCCGGTCACCGACGTGTGCCTGTCCTGCATCTGTGAGGCTTCGTCCGGTTGTGATGCTTCCCTGCGCTGCAGCGGTGACGTGTGCGGGATGTTCGCCATCACCTGGGCGTACTGGGCCGATGCCGGCAAGCCCGTCCAGCAGGGTGATTCACCCGACTCGCAGAATGCGTACGCGAACTGCGCCAATGAACCGTACTGTGCGGCCCGGACCGTCCAGGGCTACATGAGGAAGTTTGGACAGGACTGCAATGGTGACGGTCGGATCGATTGCTTCGATCACGCGATCGTCCACAAGCTGGGAGGCTACAACTGCAAGAACACGGTACCGATCGTCTACCAGTCCAAGATCGACGAATGCATCCAGCGAAAGGCGAACGAGTACAGTGCGGCTCGTCAGTAGAGTACGTGGTCGTCTC TGTTTGCTTATTTAATTTGCTAATTTTAATACACATCACGTAAGGCTCTCCTTCGCTTCTTTAAAGTCGAAATCTGAAAAAAGAGCATTGATTTGAAGAAAGATGTTTCACGTCAACAGTTTTATTCATTTTCTTTCGAAATACATAAAAGTAAA]
[+] EMBL BX615727 [ TGTTTGATCAGTTTGTCGCGTGTGTATAGAGCAAGCCAAAATGGTGCCAAAATCTTTGCTGCTCGTGTGCTTGATCGCGATCGGTGTTAGCAGCGTGCTGGCGGATGTTTCTCACATCGCCCCACCGCAACAACAGCTTGAGGATCCGGTCACCGACGTGTGCCTGTCCTGCATCTGTGAGGCTTCGTCCGGTTGTGATGCTTCCCTGCGCTGCAGCGGTGACGTGTGCGGGATGTTCGCCATCACCTGGGCGTACTGGGCCGATGCCGGCAAGCCCGTCCAGCAGGGTGATTCACCCGACTCGCAGAATGCGTACGCGAACTGCGCCAATGAACCGTACTGTGCGGCCCGGACCGTCCAGGGCTACATGAGGAAGTTTGGACAGGACTGCAATGGTGACGGTCGGATCGATTGCTTCGATCACGCGATCGTCCACAAGCTGGGAGGCTACAACTGCAAGAACACGGTACCGATCGTCTACCAGTCCAAGATCGACGAATGCATCCAGCGAAAGG ]
consensusID : consensus_7498#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 611 fasta sequence
[AATNGCCCGAGGNTACACCGAAGCGGACGTCTTTATCCTTTCGAGAGCTTTGGGCTTGTTGCGTTGCCTACTTTGCATTGTTGTCGTCGTTGTTGTTTGATCAGTTTGTCGCGTGTGTATAGAGCAAGCCAAAATGGTGCCAAAATCTTTGCTGCTCGTGTGCTTGATCGCGATCGGTGTTAGCAGCGTGCTGGCGGATGTTTCTCACATCGCCCCACCGCAACAACAGCTTGAGGATCCGGTCACCGACGTGTGCCTGTCCTGCATCTGTGAGGCTTCGTCCGGTTGTGATGCTTCCCTGCGCTGCAGCGGTGACGTGTGCGGGATGTTCGCCATCACCTGGGCGTACTGGGCCGATGCCGGCAAGCCCGTCCAGCAGGGTGATTCTCCCGACTCGCAGAATGCGTACGCGAACTGCGCCAATGAACCGTACTGTGCGGCCCGAACCGTCCAGGGCTACATGAGGAA-G-TTTGGACAGGACTGCA-A-TGGTGACGGTCGGATCGATTGCTTCG-ATCACGCGATCGTCCACAAGCTGGGAGGCTACA-A-CTGCAA-AAACGCGGTACCGATCGTCTACCAGTCCAAGATCGACGAATGCATCCAGCGAAAGGCGA]
[+] EMBL AL934948 [AATNGCCCGAGGNTACACCGAAGCGGACGTCTTTATCCTTTCGAGAGCTTTGGGCTTGTTGCGTTGCCTACTTTGCATTGTTGTCGTCGTTGTTGTTTGATCAGTTTGTCGCGTGTGTATAGAGCAAGCCAAAATGGTGCCAAAATCTTTGCTGCTCGTGTGCTTGATCGCGATCGGTGTTAGCAGCGTGCTGGCGGATGTTTCTCACATCGCCCCACCGCAACAACAGCTTGAGGATCCGGTCACCGACGTGTGCCTGTCCTGCATCTGTGAGGCTTCGTCCGGTTGTGATGCTTCCCTGCGCTGCAGCGGTGACGTGTGCGGGATGTTCGCCATCACCTGGGCGTACTGGGCCGATGCCGGCAAGCCCGTCCAGCAGGGTGATTCTCCCGACTCGCAGAATGCGTACGCGAACTGCGCCAATGAACCGTACTGTGCGGCCCGAACCGTCCAGGGCTACATGAGGAA G TTTGGACAGGACTGCA A TGGTGACGGTCGGATCGATTGCTTCG ATCACGCGATCGTCCACAAGCTGGGAGGCTACA A CTGCAA AAACGCGGTACCGATCGTCTACCAGTCCAAGATCGACGAATGCATCCAGCGAAAGGCGA]
[+] EMBL AL692323 [ CCGAGG TTTACCGAAGCGGACGTCTTTATCCTTTCGAGAGCTTTGGGCTTGTTGCGTTGCCTACTTTGCACTGTAGTCGTCGTTGTTGTTTGATCAGTTTGTCGCGTGTGTATAGAGCAAGCCAAAATGGTGCCAAAATCTTTGCTGCTCGTGTGCTTGATCGCGATCGGTGTTAGCAGCGTGCTGGCGGATGTTTCTCACATCGCCCCACCGCAACAACAGCTTGAGGATCCGGTCACCGACGTGTGCCTGTCCTGCATCTGTGAGGCTTCGTCCGGTTGTGATGCTTCCCTGCGCTGCAGCGGTGACGTGTGCGGGATGTTCGCCATCACCTGGGCGTACTGGGCCGATGCCGGCAAGCCCGTCCAGTAGGGTGATTCACCCGACTCGCAGAATGCGTACGCGAACTGCGCCAATGAACCGTACTGTGCGGCCCGGACCGTCCAGCGCTACATGAGGAACGCTTTGGACAGGACTGCACACTGGTGACGGTCGGATCGATTGCTTCGCATCACGCGATCGTCCACAAGCTGGGAGGCTACANACCTGCAACGAACACGGTACCGATCGTC ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7498#0 ------CCGAGATCATCGCACACGAAGCGGACGTCTTTATCCTTTCGAGAGCTTTGGGCT 54
consensus_7498#1 AATNGCCCGAGGNTA---CAC-CGAAGCGGACGTCTTTATCCTTTCGAGAGCTTTGGGCT 56
***** * *** **************************************
consensus_7498#0 TGTTGCGTTGCCTACTTTGCACTGTTGTCGTCGTTGTTGTTTGATCAGTTTGTCGCGTGT 114
consensus_7498#1 TGTTGCGTTGCCTACTTTGCATTGTTGTCGTCGTTGTTGTTTGATCAGTTTGTCGCGTGT 116
********************* **************************************
consensus_7498#0 GTATAGAGCAAGCCAAAATGGTGCCAAAATCTTTGCTGCTCGTGTGCTTGATCGCGATCG 174
consensus_7498#1 GTATAGAGCAAGCCAAAATGGTGCCAAAATCTTTGCTGCTCGTGTGCTTGATCGCGATCG 176
************************************************************
consensus_7498#0 GTGTTAGCAGCGTGCTGGCGGATGTTTCTCACATCGCCCCACCGCAACAACAGCTTGAGG 234
consensus_7498#1 GTGTTAGCAGCGTGCTGGCGGATGTTTCTCACATCGCCCCACCGCAACAACAGCTTGAGG 236
************************************************************
consensus_7498#0 ATCCGGTCACCGACGTGTGCCTGTCCTGCATCTGTGAGGCTTCGTCCGGTTGTGATGCTT 294
consensus_7498#1 ATCCGGTCACCGACGTGTGCCTGTCCTGCATCTGTGAGGCTTCGTCCGGTTGTGATGCTT 296
************************************************************
consensus_7498#0 CCCTGCGCTGCAGCGGTGACGTGTGCGGGATGTTCGCCATCACCTGGGCGTACTGGGCCG 354
consensus_7498#1 CCCTGCGCTGCAGCGGTGACGTGTGCGGGATGTTCGCCATCACCTGGGCGTACTGGGCCG 356
************************************************************
consensus_7498#0 ATGCCGGCAAGCCCGTCCAGCAGGGTGATTCACCCGACTCGCAGAATGCGTACGCGAACT 414
consensus_7498#1 ATGCCGGCAAGCCCGTCCAGCAGGGTGATTCTCCCGACTCGCAGAATGCGTACGCGAACT 416
******************************* ****************************
consensus_7498#0 GCGCCAATGAACCGTACTGTGCGGCCCGGACCGTCCAGGGCTACATGAGGAAGTTTGGAC 474
consensus_7498#1 GCGCCAATGAACCGTACTGTGCGGCCCGAACCGTCCAGGGCTACATGAGGAAGTTTGGAC 476
**************************** *******************************
consensus_7498#0 AGGACTGCAATGGTGACGGTCGGATCGATTGCTTCGATCACGCGATCGTCCACAAGCTGG 534
consensus_7498#1 AGGACTGCAATGGTGACGGTCGGATCGATTGCTTCGATCACGCGATCGTCCACAAGCTGG 536
************************************************************
consensus_7498#0 GAGGCTACAACTGCAAGAACACGGTACCGATCGTCTACCAGTCCAAGATCGACGAATGCA 594
consensus_7498#1 GAGGCTACAACTGCAAAAACGCGGTACCGATCGTCTACCAGTCCAAGATCGACGAATGCA 596
**************** *** ***************************************
consensus_7498#0 TCCAGCGAAAGGCAAACGAGTACAGTGCGGCACGTCAGTAAAGCGTGGTCTTCTCTTTTT 654
consensus_7498#1 TCCAGCGAAAGGCGA--------------------------------------------- 611
************* *
consensus_7498#0 TTTTCTTATTTAATTTGCTAATTTTAATACACATCACGTAAGGCTCTCCTTCGCTTCTTT 714
consensus_7498#1 ------------------------------------------------------------
consensus_7498#0 AAAGTCGAAATCTGAAAAAAGAGCATTGATTTGAAGAAAGATGTTTCACGTCAACAGTTT 774
consensus_7498#1 ------------------------------------------------------------
consensus_7498#0 TATTCATTTTCTTTCGAAATACATAAAAGTAAA 807
consensus_7498#1 ---------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||