cluster # 7511

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Anopheles gambiae
cluster # 7511 cluster # 7511 Sequences # 7 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7511#0 length = 873 sequences # 2

consensus_7511#1 length = 732 sequences # 4
consensus_7511#2 length = 252 sequences # 1

consensusID : consensus_7511#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 873
fasta sequence

                              [CCGCGGCGTTAGATCGAAATATTCGTTTGAAGAAAACATTCGGTGCTAATAGTGCTTGTCTAAATAGTGAAAGCGTACATTCTGCGTTTCATTCATTCATCGCAATCCACTTACGTGACAGTTAAAAGATA-TCTAGGTTTCTGAGCGATCATTCATACACTAGATCTCGACGATGGCGTCAGGCACTTTTACTCAGCGTTTGCTGGTGGCTCTTATGATATTCGCCCTGATTGCCGACCTTAGCACACTAGTTGCAGCCCGACCGCAAGATAGTGACGCTGCCTCTGTAGCTGCCGCAATTAGATACCTCCAGGAGCTTGAAACTAAGCATGCCCAACATGCTAGACCCAGATTCGGAAAGCGTGGTGGATATCTTAACCCGGCAATATTTGGGCAGGATGAACAGGAGGTTGATTGGCAGGATTCAACATTTTCGAGATGAACAGCTACCAACAAATATCTAGACATGAAGTCCCTGAGATTGGACAAAAGCAACCCGCAGCATCATGTTTATCTCATCCCGTTAAACTACATTAATACTGCCTACGATATGATCCTGATCTATTTACTGCTTTTCTGTATCTTTTTGCATTGAAGATATTGTGTTATTGAAATAATCAATTAAAGCCAATAATTCAGTAATCTTAACAGTTTAACCAGTTTTCGTTCGATAAAACTGCTTGACTTAATCTCGTTTAGGATGGAGTTACATTATGTATACAGCATTAAGTAACCTTCCGATTAACCTTTTCTAGATTTAAAAAAAAAAAACTAAATTCACCTACAGTCACTTCAACTTCAATGTGGAGCAACTATCTGAAATGAACAAAAAACAGGACAAGAGAGAACAAAATAAACCTATTTATATCAATA]

[+] EMBL BM643631             [CCGCGGCGTTAGATCGAAATATTCGTTTGAAGAAAACATTCGGTGCTAATAGTGCTTGTCTAAATAGTGAAAGCGTACATTCTGCGTTTCATTCATTCATCGCAATCCACTTACGTGACAGTTAAAAGATA TCTAGGTTTCTGAGCGATCATTCATACACTAGATCTCGACGATGGCGTCAGGCACTTTTACTCAGCGTTTGCTGGTGGCTCTTATGATATTCGCCCTGATTGCCGACCTTAGCACACTAGTTGCAGCCCGACCGCAAGATAGTGACGCTGCCTCTGTAGCTGCCGCAATTAGATACCTCCAGGAGCTTGAAACTAAGCATGCCCAACATGCTAGACCCAGATTCGGAAAGCGTGGTGGATATCTTAACCCGGCAATATTTGGGCAGGATGAACAGGAGGTTGATTGGCAGGATTCAACATTTTCGAGATGAACAGCTACCAACAAATATCTAGACATGAAGTCCCTGAGA                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX609371             [                                                           CTAAATAGTGAAAGCGTACATTCTTCGTTTCATTCATTCATCGCAATCCACTTACGTGACAGTTAAAAGATATTCTAGGTTTCTGAGCGATCATTCATACACTAGATCTCGACGATGGCGTCAGGCACTTTTACTCAGCGTTTGCTGGTGGCTCTTATGATATTCGCCCTGATTGCCGACCTTAGCACACTAGTTGCAGCCCGACCGCAAGATAGTGACGCTGCCTCTGTAGCTGCCGCAATTAGATACCTCCAGGAGCTTGAAACTAAGCATGCCCAACATGCTAGACCCAGATTCGGAAAGCGTGGTGGATATCTTAACCCGGCAATATTTGGGCAGGATGAACAGGAGGTTGATTGGCAGGATTCAACATTTTCGAGATGAACAGCTACCAACAAATATCTAGACATGAAGT CCTGAGATTGGACAAAAGCAACCCGCAGCATCATGTTTATCTCATCCCGTTAAACTACATTAATACTGCCTACGATATGATCCTGATCTATTTACTGCTTTTCTGTATCTTTTTGCATTGAAGATATTGTGTTATTGAAATAATCAATTAAAGCCAATAATTCAGTAATCTTAACAGTTTAACCAGTTTTCGTTCGATAAAACTGCTTGACTTAATCTCGTTTAGGATGGAGTTACATTATGTATACAGCATTAAGTAACCTTCCGATTAACCTTTTCTAGATTTAAAAAAAAAAAACTAAATTCACCTACAGTCACTTCAACTTCAATGTGGAGCAACTATCTGAAATGAACAAAAAACAGGACAAGAGAGAACAAAATAAACCTATTTATATCAATA]




>consensus_7511#0
CCGCGGCGTTAGATCGAAATATTCGTTTGAAGAAAACATTCGGTGCTAATAGTGCTTGTC
TAAATAGTGAAAGCGTACATTCTGCGTTTCATTCATTCATCGCAATCCACTTACGTGACA
GTTAAAAGATATCTAGGTTTCTGAGCGATCATTCATACACTAGATCTCGACGATGGCGTC
AGGCACTTTTACTCAGCGTTTGCTGGTGGCTCTTATGATATTCGCCCTGATTGCCGACCT
TAGCACACTAGTTGCAGCCCGACCGCAAGATAGTGACGCTGCCTCTGTAGCTGCCGCAAT
TAGATACCTCCAGGAGCTTGAAACTAAGCATGCCCAACATGCTAGACCCAGATTCGGAAA
GCGTGGTGGATATCTTAACCCGGCAATATTTGGGCAGGATGAACAGGAGGTTGATTGGCA
GGATTCAACATTTTCGAGATGAACAGCTACCAACAAATATCTAGACATGAAGTCCCTGAG
ATTGGACAAAAGCAACCCGCAGCATCATGTTTATCTCATCCCGTTAAACTACATTAATAC
TGCCTACGATATGATCCTGATCTATTTACTGCTTTTCTGTATCTTTTTGCATTGAAGATA
TTGTGTTATTGAAATAATCAATTAAAGCCAATAATTCAGTAATCTTAACAGTTTAACCAG
TTTTCGTTCGATAAAACTGCTTGACTTAATCTCGTTTAGGATGGAGTTACATTATGTATA
CAGCATTAAGTAACCTTCCGATTAACCTTTTCTAGATTTAAAAAAAAAAAACTAAATTCA
CCTACAGTCACTTCAACTTCAATGTGGAGCAACTATCTGAAATGAACAAAAAACAGGACA
AGAGAGAACAAAATAAACCTATTTATATCAATA

consensusID : consensus_7511#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 732
fasta sequence

                              [CCGAAAACATTCGGTGCTAATAGTGCTTGTCTAAATAGTGAAAGCGTACATTCTGCGTTTCATTCATTCATCGCAATCCACTTACGTGACAGTTAAAAGATATTCTAGGTTTCTGAGCGATCATTCATACACTAGATCTCGACGATGGCGTCAGGCACTTTTACTCAGCGTTTGCTGGTGGCTCTTATGATATTCGCCCTGATTGCCGACCTTAGCACACTAGTTGCAGCCCGACCGCAAGATAGTGACGCTGCCTCTGTAGCTGCCGCAATTAGATACCTCCAGGAGCTTGAAACTAAGCATGCCCAACATGCTAGACCCAGATTCGGAAAGCGTGGTGGATATCTTAACCCGGCAATATTTGGGCAGGATGAACAGGAGAATCTTTACAGGTTGATTGGCAGGATTCAACATTTTCGAGATGAACAGCTACCAACAAATATCTAGACATGAAGTCCTGAGATTGGACAAAAGCAACCCGCAGCATCATGTTTATCTCATCCCGTTAAACTACATTAATACTGCCTACGATATGATCCTGATCTATTTACTGCTTTTCTGTATCTTTTTGCATTGAAGATATTGTGTTATTGAAATAATCAATTAAAGCCAATAATTCAGTAATCTTAACAGTTTAA-CCAGTTTTCGTTCGATAAAACTGCTTGACTTAATCTCGTTTAGGATGGAGTTACATTATGTATACAGCA-TTAAGTAACCTTCCGATTAACCTTT]

[+] EMBL BM653179             [CCGAAAACATTCGGTGCTAATAGTGCTTGTCTAAATAGTGAAAGCGTACATTCTGCGTTTCATTCATTCATCGCAATCCACTTACGTGACAGTTAAAAGATATTCTAGGTTTCTGAGCGATCATTCATACACTAGATCTCGACGATGGCGTCAGGCACTTTTACTCAGCGTTTGCTGGTGGCTCTTATGATATTCGCCCTGATTGCCGACCTTAGCACACTAGTTGCAGCCCGACCGCAAGATAGTGACGCTGCCTCTGTAGCTGCCGCAATTAGATACCTCCAGGAGCTTGAAACTAAGCATGCCCAACATGCTAGACCCAGATTCGGAAAGCGTGGTGGATATCTTAACCCGGCAATATTTGGGCAGGATGAACAGGAGAATCTTTACAGGTTGATTGGCAGGATTCAACATTTTCGAGATGAACAGCTACCAACAAATATCTAGACATGAAGTCCTGAGATTGGACAAAAGCAACCCGCAGCATCATGTTTATCTCATCCCGTTAAACTACATTAATACTGCCTACGATATGATCCTGATCTATTTACTGCTTTTCTGTATCTTTTTGCATTGAAGATATTGTGTTATTGAAATAATCAATTAAAGCCAATAATTCAGTAATCTTAACAGTTTAA CCAGTTTTCGTTCGATAAAACTGCTTGACTTAATCTCGTTTAGGAT                                                 ]
[+] EMBL CNS08L1D             [    AAACATTCGGTGCTAATAGTGCTTGTATAAATAGTGAAAGCGTACATTCTGCGTTTCATTCATTCATCGCCCTCCACTTACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX624448             [                                                        GTTTCATCCATTCATCGCAATCCACTTACGTGACAGTTAAAAGATATTCTAGGTTTCTGAGCGATCATTCATACACTAGATCTCGACGATGGCGTCAGGCACTTTTACTCAGCGTTTGCTGGTGGCTCTTATGATATTCGCCCTGATTGCCGACCTTAGCACACTAGTTGCAGCCCGACCGCAAGATAGTGACGCTGCCTCTGTAGCTGCCGCAATTAGATACCTCCAGGAGCTTGAAACTAAGCATGCCCAACATGCTAGACCCAGATTCGGAAAGCGTGGTGGATATCTTAACCCGGCAATATTTGGGCAGGATGAACAGGAGAATCTTTACAGGTTGATTGGCAGGATTCAACATTTTCGAGATGAACAGCTACCAACAAATATCTAGACATGAAGTCCTGAGATTGGACAAAAGCAACCCGCAGCATCATGTTTATCTCATCCCGTTAAACTACATTAATACTGCCTACGATATGATCCTGATCTATTTACTGCTTTTCTGTATCTTTTTGCATTGAAGATATTGTGTTATTGAAATAATCAATTAAAGCCAATAATTCAGTAATCTTAACAGNTTAACCCAGTTTTCGTTCGATAAAACTGCTTGACTTAATCTCGGTTAGGATGGAGTTACATTATGTATACAGCATTTAAGTAACCTTCCGATTA      ]
[+] EMBL BX612294             [                                                                               ACTTACGTGACAGTTAAAAGATATTCTAGGTTTCTGAGCGATCATTCATACACTAGATCTCGACGATGGCGTCAGGCACTTTTACTCAGCGTTTGCTGGTGGCTCTTATGATATTCGCCCTGATTGCCGACCTTAGCACACTAGTTGCAGCCCGACCGCAAGATAGTGACGCTGCCTCTGTAGCTGCCGCAATTAGATACCTCCAGGAGCTTGAAACTAAGCATGCCCAACATGCTAGACCCTGATTCGGAAAGCGTGGTGGATATCTTAACCCGGCAATATTTGGGCAGGATGAACAGGAGAATCTTTACAGGTTGATTGGCAGGATTCAACATTTTCGAGATGAACAGCTACCAACAAATATCTAGACATGAAGTCCTGAGATTGGACAAAAGCAACCCGCAGCATCATGTTTATCTCATCCCGTTAAACTACATTAATACTGCCTACGATATGATCCTGATCTATTTACTGCTTTTCTGTATCTTTTTGCATTGAAGATATTGTGTTATTGAAATAATCAATTAAAGCCAATAATTCAGTAATCTTAACAGTTTAA CCAGTTTTCGTTCGATAAAACTGCTTGACTTAATCTCGTTTAGGATGGAGTTACATTATGTATACAGCA TTAAGTAACCTTCCGATTAACCTTT]




>consensus_7511#1
CCGAAAACATTCGGTGCTAATAGTGCTTGTCTAAATAGTGAAAGCGTACATTCTGCGTTT
CATTCATTCATCGCAATCCACTTACGTGACAGTTAAAAGATATTCTAGGTTTCTGAGCGA
TCATTCATACACTAGATCTCGACGATGGCGTCAGGCACTTTTACTCAGCGTTTGCTGGTG
GCTCTTATGATATTCGCCCTGATTGCCGACCTTAGCACACTAGTTGCAGCCCGACCGCAA
GATAGTGACGCTGCCTCTGTAGCTGCCGCAATTAGATACCTCCAGGAGCTTGAAACTAAG
CATGCCCAACATGCTAGACCCAGATTCGGAAAGCGTGGTGGATATCTTAACCCGGCAATA
TTTGGGCAGGATGAACAGGAGAATCTTTACAGGTTGATTGGCAGGATTCAACATTTTCGA
GATGAACAGCTACCAACAAATATCTAGACATGAAGTCCTGAGATTGGACAAAAGCAACCC
GCAGCATCATGTTTATCTCATCCCGTTAAACTACATTAATACTGCCTACGATATGATCCT
GATCTATTTACTGCTTTTCTGTATCTTTTTGCATTGAAGATATTGTGTTATTGAAATAAT
CAATTAAAGCCAATAATTCAGTAATCTTAACAGTTTAACCAGTTTTCGTTCGATAAAACT
GCTTGACTTAATCTCGTTTAGGATGGAGTTACATTATGTATACAGCATTAAGTAACCTTC
CGATTAACCTTT

consensusID : consensus_7511#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 252
fasta sequence

                              [NGAGGNAGATTCGAGCAAGAATCGCGCNCGAGGNNATGCCGGTGCTAATAGTGCTTGTCNCAAATAGTGAAAGCGTACATTCTGCGGTTTCATCCATTCATCGCAAGTCCACTTACGTGACAGTTAAAAGATATTCTAGGTTTCTGAGCGATCATTCATACACTAGATCTCGACGATNGCGTCAGGCACTTTTACTCAGCGTTTGCTGGTGGCTCTTATGATATTCGCCCATGAATTAGCCGACCTNTAGCC]

[+] EMBL BX469355             [NGAGGNAGATTCGAGCAAGAATCGCGCNCGAGGNNATGCCGGTGCTAATAGTGCTTGTCNCAAATAGTGAAAGCGTACATTCTGCGGTTTCATCCATTCATCGCAAGTCCACTTACGTGACAGTTAAAAGATATTCTAGGTTTCTGAGCGATCATTCATACACTAGATCTCGACGATNGCGTCAGGCACTTTTACTCAGCGTTTGCTGGTGGCTCTTATGATATTCGCCCATGAATTAGCCGACCTNTAGCC]




>consensus_7511#2
NGAGGNAGATTCGAGCAAGAATCGCGCNCGAGGNNATGCCGGTGCTAATAGTGCTTGTCN
CAAATAGTGAAAGCGTACATTCTGCGGTTTCATCCATTCATCGCAAGTCCACTTACGTGA
CAGTTAAAAGATATTCTAGGTTTCTGAGCGATCATTCATACACTAGATCTCGACGATNGC
GTCAGGCACTTTTACTCAGCGTTTGCTGGTGGCTCTTATGATATTCGCCCATGAATTAGC
CGACCTNTAGCC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7511#0      CCGCGGCGTTAGATCGAAATATTCGTTTGAAGAAAACATTCGGTGCTAATAGTGCTTGTC 60
consensus_7511#1      -----------------------------CCGAAAACATTCGGTGCTAATAGTGCTTGTC 31
consensus_7511#2      -NGAGGNAGATTCGAGCAAGAATCGCGCNCGAGGNNATGCCGGTGCTAATAGTGCTTGTC 59
                                                              ********************

consensus_7511#0      T-AAATAGTGAAAGCGTACATTCTGCG-TTTCATTCATTCATCGCAA-TCCACTTACGTG 117
consensus_7511#1      T-AAATAGTGAAAGCGTACATTCTGCG-TTTCATTCATTCATCGCAA-TCCACTTACGTG 88
consensus_7511#2      NCAAATAGTGAAAGCGTACATTCTGCGGTTTCATCCATTCATCGCAAGTCCACTTACGTG 119
                        ************************* ****** ************ ************

consensus_7511#0      ACAGTTAAAAGATAT-CTAGGTTTCTGAGCGATCATTCATACACTAGATCTCGACGATGG 176
consensus_7511#1      ACAGTTAAAAGATATTCTAGGTTTCTGAGCGATCATTCATACACTAGATCTCGACGATGG 148
consensus_7511#2      ACAGTTAAAAGATATTCTAGGTTTCTGAGCGATCATTCATACACTAGATCTCGACGATNG 179
                      *************** ****************************************** *

consensus_7511#0      CGTCAGGCACTTTTACTCAGCGTTTGCTGGTGGCTCTTATGATATTCGCCC-TGATT--G 233
consensus_7511#1      CGTCAGGCACTTTTACTCAGCGTTTGCTGGTGGCTCTTATGATATTCGCCC-TGATT--G 205
consensus_7511#2      CGTCAGGCACTTTTACTCAGCGTTTGCTGGTGGCTCTTATGATATTCGCCCATGAATTAG 239
                      *************************************************** *** *  *

consensus_7511#0      CCGACCTTAGCACACTAGTTGCAGCCCGACCGCAAGATAGTGACGCTGCCTCTGTAGCTG 293
consensus_7511#1      CCGACCTTAGCACACTAGTTGCAGCCCGACCGCAAGATAGTGACGCTGCCTCTGTAGCTG 265
consensus_7511#2      CCGACCTNTAGCC----------------------------------------------- 252
                      *******     *                                               

consensus_7511#0      CCGCAATTAGATACCTCCAGGAGCTTGAAACTAAGCATGCCCAACATGCTAGACCCAGAT 353
consensus_7511#1      CCGCAATTAGATACCTCCAGGAGCTTGAAACTAAGCATGCCCAACATGCTAGACCCAGAT 325
consensus_7511#2      ------------------------------------------------------------
                                                                                  

consensus_7511#0      TCGGAAAGCGTGGTGGATATCTTAACCCGGCAATATTTGGGCAGGATGAACAGGAG---- 409
consensus_7511#1      TCGGAAAGCGTGGTGGATATCTTAACCCGGCAATATTTGGGCAGGATGAACAGGAGAATC 385
consensus_7511#2      ------------------------------------------------------------
                                                                                  

consensus_7511#0      -------GTTGATTGGCAGGATTCAACATTTTCGAGATGAACAGCTACCAACAAATATCT 462
consensus_7511#1      TTTACAGGTTGATTGGCAGGATTCAACATTTTCGAGATGAACAGCTACCAACAAATATCT 445
consensus_7511#2      ------------------------------------------------------------
                                                                                  

consensus_7511#0      AGACATGAAGTCCCTGAGATTGGACAAAAGCAACCCGCAGCATCATGTTTATCTCATCCC 522
consensus_7511#1      AGACATGAAGTCC-TGAGATTGGACAAAAGCAACCCGCAGCATCATGTTTATCTCATCCC 504
consensus_7511#2      ------------------------------------------------------------
                                                                                  

consensus_7511#0      GTTAAACTACATTAATACTGCCTACGATATGATCCTGATCTATTTACTGCTTTTCTGTAT 582
consensus_7511#1      GTTAAACTACATTAATACTGCCTACGATATGATCCTGATCTATTTACTGCTTTTCTGTAT 564
consensus_7511#2      ------------------------------------------------------------
                                                                                  

consensus_7511#0      CTTTTTGCATTGAAGATATTGTGTTATTGAAATAATCAATTAAAGCCAATAATTCAGTAA 642
consensus_7511#1      CTTTTTGCATTGAAGATATTGTGTTATTGAAATAATCAATTAAAGCCAATAATTCAGTAA 624
consensus_7511#2      ------------------------------------------------------------
                                                                                  

consensus_7511#0      TCTTAACAGTTTAACCAGTTTTCGTTCGATAAAACTGCTTGACTTAATCTCGTTTAGGAT 702
consensus_7511#1      TCTTAACAGTTTAACCAGTTTTCGTTCGATAAAACTGCTTGACTTAATCTCGTTTAGGAT 684
consensus_7511#2      ------------------------------------------------------------
                                                                                  

consensus_7511#0      GGAGTTACATTATGTATACAGCATTAAGTAACCTTCCGATTAACCTTTTCTAGATTTAAA 762
consensus_7511#1      GGAGTTACATTATGTATACAGCATTAAGTAACCTTCCGATTAACCTTT------------ 732
consensus_7511#2      ------------------------------------------------------------
                                                                                  

consensus_7511#0      AAAAAAAAACTAAATTCACCTACAGTCACTTCAACTTCAATGTGGAGCAACTATCTGAAA 822
consensus_7511#1      ------------------------------------------------------------
consensus_7511#2      ------------------------------------------------------------
                                                                                  

consensus_7511#0      TGAACAAAAAACAGGACAAGAGAGAACAAAATAAACCTATTTATATCAATA 873
consensus_7511#1      ---------------------------------------------------
consensus_7511#2      ---------------------------------------------------