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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_755#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 770 fasta sequence
[GCCAGAATCGCCACGAGGTTNACGTGCAGAGGCCAGTATTACGCGAACGCGAGAAGGAAGTGCAGCGTACATTAGCTACTCACTTTGCGTGATCGCGACAATGGAGCGGCAGCATCACCAGAGAGATGAAGCTATGCGTCATTTTAACGCTTTGTTGGCCGATCTGGCTGCGCAATGCAGACCTCACGTGGAAGGAGGTAAAAAAGCTGCTGAAAAAAGATCACCGTTGGGAATTAATTTCCATGCTGGACCGAGACGATCGTGAAAGACTGTTCAACGAACACATTTCTAACTTGGTGCGCAAGAAACGTGATNAGTTCCGCGAAATGTTGGATGAAATTCCTTCCGCTTGGAACTAACCTCTTCCTGGAATAGACATCAAGAGNAACAGTATTCGTGATGAGTCCACGATACGTTGAAATACAAACANGCAGGTGAACGGGGGCGAGCGAGANATTTCGAGACTACAGTCGAGAGTACAAGACGGCAGAATNGCAAAACTTTGCTTTGTCGAGAACGTGCTGCAGGAATGTACAGTCNGATTANCGTCATNAGAAGCTTTGACATTATACCGTGAANAAATGCANAGGACTCCAATGTGTTGGCCGGGTTGGANAGGGTTAANGAGAGGGGAGCAATTGTTCTGGGCCGANAGACACGGAATAGGGGCCGGGCGTAAGTNTGGGATGGCCTTACAGCNCAGTTCCAGTGACGTAGGGCACANGGGGGGGAAGAGCNGCCAACCGGCCGCGACNCATCNGAATTGTCGA]
[+] EMBL BX467991 [GCCAGAATCGCCACGAGGTTNACGTGCAGAGGCCAGTATTACGCGAACGCGAGAAGGAAGTGCAGCGTACATTAGCTACTCACTTTGCGTGATCGCGACAATGGAGCGGCAGCATCACCAGAGAGATGAAGCTATGCGTCATTTTAACGCTTTGTTGGCCGATCTGGCTGCGCAATGCAGACCTCACGTGGAAGGAGGTAAAAAAGCTGCTGAAAAAAGATCACCGTTGGGAATTAATTTCCATGCTGGACCGAGACGATCGTGAAAGACTGTTCAACGAACACATTTCTAACTTGGTGCGCAAGAAACGTGATNAGTTCCGCGAAATGTTGGATGAAATTCCTTCCGCTTGGAACTAACCTCTTCCTGGAATAGACATCAAGAGNAACAGTATTCGTGATGAGTCCACGATACGTTGAAATACAAACANGCAGGTGAACGGGGGCGAGCGAGANATTTCGAGACTACAGTCGAGAGTACAAGACGGCAGAATNGCAAAACTTTGCTTTGTCGAGAACGTGCTGCAGGAATGTACAGTCNGATTANCGTCATNAGAAGCTTTGACATTATACCGTGAANAAATGCANAGGACTCCAATGTGTTGGCCGGGTTGGANAGGGTTAANGAGAGGGGAGCAATTGTTCTGGGCCGANAGACACGGAATAGGGGCCGGGCGTAAGTNTGGGATGGCCTTACAGCNCAGTTCCAGTGACGTAGGGCACANGGGGGGGAAGAGCNGCCAACCGGCCGCGACNCATCNGAATTGTCGA]
consensusID : consensus_755#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 541 fasta sequence
[CTCAAATGATCGGGAGGCAAGTCAATCGGCAAAGGGTGCTAGCAACCATGACGGCACTGCAAACAATAACAATGACGAGGACGAAGGCGAGGATTGTAACACGTCGGATGAAGATGAAATTGAGCGACAACAAAGAGAGCGTGAACGCAAAGCGCGTGCAGAGGCCAGTATTAAGGAACGCGAGAAGGAAGTGCAGCGTACATTAGCTACTCATTTGCGTGATCGCGACAAGAAACGTGATAAGTTCCGCGAAATGTTGGATGAAATTCCTTCCCTTGAACTAACCTCTTCCTGGAAAGACATCAAAAAAAGTATTCGTGATGATCCACGATACTTGAAATACAACAGCAGTGAACGGGGCGAGCGAGAATTTCGAGACTACATCAAAGACAAGACGGCGAATGCAAAACTTGCTTTTCGAGAACTGCTGCAGGAATGTAAGTTTATTACTCATAAAAGCTTTGAATTATACCGTGAAAATGCAAATCATTTGCGTGAAGTAGAAGACATTTTGCGAAACGATAGCCGCTATTTGATACTA]
[+] EMBL BX616043 [CTCAAATGATCGGGAGGCAAGTCAATCGGCAAAGGGTGCTAGCAACCATGACGGCACTGCAAACAATAACAATGACGAGGACGAAGGCGAGGATTGTAACACGTCGGATGAAGATGAAATTGAGCGACAACAAAGAGAGCGTGAACGCAAAGCGCGTGCAGAGGCCAGTATTAAGGAACGCGAGAAGGAAGTGCAGCGTACATTAGCTACTCATTTGCGTGATCGCGACAAGAAACGTGATAAGTTCCGCGAAATGTTGGATGAAATTCCTTCCCTTGAACTAACCTCTTCCTGGAAAGACATCAAAAAAAGTATTCGTGATGATCCACGATACTTGAAATACAACAGCAGTGAACGGGGCGAGCGAGAATTTCGAGACTACATCAAAGACAAGACGGCGAATGCAAAACTTGCTTTTCGAGAACTGCTGCAGGAATGTAAGTTTATTACTCATAAAAGCTTTGAATTATACCGTGAAAATGCAAATCATTTGCGTGAAGTAGAAGACATTTTGCGAAACGATAGCCGCTATTTGATACTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_755#0 GCCAGAATCGCCACGAGGTTNACGTGCAGAGGCCAGTATTACGCGAACG--CGAGAAGGA 58
consensus_755#1 -----------------------------------------CTCAAATGATCGGGAGGCA 19
* * ** * ** ** * *
consensus_755#0 AGTGCAGCGTACATTAGCTACTCACTTTGCGTGATCGCGACAATG-GAGCGGCAGCATCA 117
consensus_755#1 AGT-CAATCGGCAAAGGGTGCTAGCA----ACCATGACGGCACTGCAAACAATAACA--A 72
*** ** ** * * ** * ** ** ** ** * * * ** *
consensus_755#0 CCAGAGAGATGAAGCTATGCGTCATTTTAACGCTTTGTTGGCCGATCTGGCTGCGCAATG 177
consensus_755#1 TGACGAGGACGAAGGCGAGG---ATTGTAACACGTCGGATGAAGATGAAATTGAGC---- 125
* ** **** * *** **** * * * * *** ** **
consensus_755#0 CAGACCTCACGTGGAAGGAGGTAAAAAAGCTGCTGAAAAAAGATCACCGTTGGGAATTAA 237
consensus_755#1 --GACAACAAAGAGAGCGTGAACGCAAAGCGCGTGCAGA--GGCCAGTATTAAGGAACG- 180
*** ** ** * * ***** ** * * * ** ** * *
consensus_755#0 TTTCCATGCTGGACCGAGACGATCGTGAAAGACTGTTCAACGAACACATTTCTAACTTGG 297
consensus_755#1 --------------CGAGAAGGAAGTGCAGCGTACATTAGCTA-CTCATTTGCGTGATCG 225
***** * *** * * * * * * ***** * *
consensus_755#0 TGCGCAAGAAACGTGATNAGTTCCGCGAAATGTTGGATGAAATTCCTTCCGCTTGGAACT 357
consensus_755#1 CG-ACAAGAAACGTGATAAGTTCCGCGAAATGTTGGATGAAATTCCTTC--CCTTGAACT 282
* ************* ******************************* * * *****
consensus_755#0 AACCTCTTCCTGGAATAGACATCAAGAGNAACAGTATTCGTGATGAGTCCACGATACGTT 417
consensus_755#1 AACCTCTTCCTGGAA-AGACATCAA---AAAAAGTATTCGTGATGA-TCCACGATAC-TT 336
*************** ********* ** ************** ********** **
consensus_755#0 GAAATACAAACANGCAGGTGAACGGGGGCGAGCGAGANATTTCGAGACTACAGTCGAGAG 477
consensus_755#1 GAAATACAAC--AGCAG-TGAACGGGG-CGAGCGAGAA-TTTCGAGACTACATCAAAG-- 389
********* **** ********* ********* ************* **
consensus_755#0 TACAAGACGGCAGAATNGCAAAACTTTGCTTTGTCGAGAACGTGCTGCAGGAATGTACAG 537
consensus_755#1 -ACAAGACGGCGAA--TGCAAAACTT-GCTTT-TCGAGAAC-TGCTGCAGGAATGTA-AG 442
********** * ********* ***** ******** *************** **
consensus_755#0 TCNGATTANCGTCATNAGAAGCTTTGACATTATACCGTGAANAAATGCANAGGACTCCAA 597
consensus_755#1 TTT-ATTAC--TCATAA-AAGCTTTGA-ATTATACCGTGAAAA--TGCAAATCATTTGCG 495
* **** **** * ********* ************* * **** * * *
consensus_755#0 TGTGTTGGCCGGGTTGGANAGGGTTAANGAGAGGGGAGCAATTGTTCTGGGCCGANAGAC 657
consensus_755#1 TG--------AAGTAGAAGACATTTTGCGAAACGATAGCCGCTATTTGATACTA------ 541
** ** * * * ** ** * * *** * ** *
consensus_755#0 ACGGAATAGGGGCCGGGCGTAAGTNTGGGATGGCCTTACAGCNCAGTTCCAGTGACGTAG 717
consensus_755#1 ------------------------------------------------------------
consensus_755#0 GGCACANGGGGGGGAAGAGCNGCCAACCGGCCGCGACNCATCNGAATTGTCGA 770
consensus_755#1 -----------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||