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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7678#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1075 fasta sequence
[CCGGTGAAGTATCATCATCTTCACTAGAAACTATACACATTGAAGTGATTAAATTGCAAGCGGTTTATTAAAAAGGCATCAATGTGTAAAGAGCTACGTGCTTAAGCAATGGCTAAAACGAAATGGAATTTAATCTTTGCCACATTTATTGTATCATGTGTTTCATTGATTGTGTTAATAGTCTCACTTTGTACACCGTATTGGATAACATCGGAGGCATATGAAAGCAACGCGTCTGGGAATAGTGAAATAAACTACGGGCTGTTTTCGGGTTCCTTAATTCAAAACTTTCTGCCCAATTCGCGGTACTACACTTTAACACTTACCTGTCTTTATCACGAATATGTGTGTGCATACAGCTGTCAAGAAGATGAAGAGTCACGAACCGAGGAAGTTTTGCAACTCTTAAAAGGATTGCCCCCTGCCGATTGTCCCAGCAGTTCTTCAAGGATGCTTCCACTTGTCCATAGGATCGATCCACCAATATTCCCCCAAAATCGTCAAGCATCCGCCAACATCGATCGCAGTAACTTTATCAACACTGGGCTGTGGGTTTCGACGGTGGTGTTTATCGGAATTGCTATAAGTTTTGCAGCTATTTCGGCCAG-TTTTTCCATCATTAACGTGCTC-TTTAATCCGATCGAACCGGT-GTTCAGCGTGTTTGGATTGTACATCT-GGAATGGGGTGGCCCTTGGGTCCACTGCACTGTGCATGATAATGTGGGGAGCATTGTTTGCTAGTACTCTAGCCGATAACATCGCCATTACGGATACGCTTACAACACAGATTCCCTACAGCTCTGACGGGCTAGCTTCCCTAGGGGTATGCTATTGGATTTTACTTTTATCCATCTTGCTGCACGGCCTCAACGTAGGACTTCTGCTTTGGCGCAAACGTATCGTCAACAAAGAACCGCCGCCAACTACTATAGATGTCGATCGGTCTGATTTGACCATTATTATGTATTAAATAAATTGTGATCTACATTTTTTTTGAATATTATATGTCAGTAACAATTGCATCCCGATGCCTGCCACCATGACAATAAATATGAAACATTTTACTAGACAAAAAA]
[+] EMBL BM649488 [CCGGTGAAGTATCATCATCTTCACTAGAAACTATACACATTGAAGTGATTAAATTGCAAGCGGTTTATTAAAAAGGCATCAATGTGTAAAGAGCTACGTGCTTAAGCAATGGCTAAAACGAAATGGAATTTAATCTTTGCCACATTTATTGTATCATGTGTTTCATTGATTGTGTTAATAGTCTCACTTTGTACACCGTATTGGATAACATCGGAGGCATATGAAAGCAACGCGTCTGGGAATAGTGAAATAAACTACGGGCTGTTTTCGGGTTCCTTAATTCAAAACTTTCTGCCCAATTCGCGGTACTACACTTTAACACTTACCTGTCTTTATCACGAATATGTGTGTGCATACAGCTGTCAAGAAGATGAAGAGTCACGAACCGAGGAAGTTTTGCAA ]
[+] EMBL BX623912 [ CTTCACTAGAAACTATACACATTGAAGTGATTAAATTGCAAGCGGTTTATTAAAAAGGCATCAATGTGTAAAGAGCTACGTGCTTAAGCAATGGCTAAAACGAAATGGAATTTAATCTTTGCCACATTTATTGTATCATGTGTTTCATTGATTGTGTTAATAGTCTCACTTTGTACACCGTATTGGATAACATCGGAGGCATATGAAAGCAACGCGTCTGGGAATAGTGAAATAAACTACGGGCTGTTTTCGGGTTCCTTAATTCAAAACTTTCTGCCCAATTCGCGGTACTACACTTTAACACTTACCTGTCTTTATCACGAATATGTGTGTGCATACAGCTGTCAAGAAGATGAAGAGTCACGAACCGAGGAAGTTTTGCAACTCTTAAAAGGATTGCCCCCTGCCGATTGTCCCAGCAGTTCTTCAAGGATGCTTCCACTTGTCCATAGGATCGATCCACCAATATTCCCCCAAAATCGTCAAGCATCCGCCAACATCGATCGCAGTAACTTTATCAACACTGGGCTGTGGGTTTCGACGGTGGTGTTTATCGGAATTGCTATAAGTTTTGCAGCTATTTCGGCCAGTTTTTTCCATCATTAACGTGCTCTTTTAATCCGATCGAACCGGTNGTTCAGCGTGTTTGGATTGTACATCTGGGAATGGGGGGGCCCTTGGGGCCACTGCAC ]
[+] EMBL BM657037 [ ccgTTGCAAACGGTTTACTAAAAAGGCATCAATGTGTAAAGAGCTACGTGCTTAAGAAATGGCTAAAACGAAATGGAATTTAATCTTTGCCACATTTATTGTATCATGTGTTTCATTGATTGTGTTAATAGTCTCACTTTGTACACCGTATTGGATAACATCGGAGGCATATGAAAGCAACGCGTCCAGGAATAGTGAAATAAACTACGGGCTGTTTTCGGGTTCCTTAACTCAAAACTTTCTGCCCAATTCGCGGTACTACACTTTAACACTTACCTGCCTTTATCACGAATATGTGTGTGCATACAGTTGTCAAGAAGATGAAGAGTCACGAACCGAGGAAGTTTTGCAACTCTTAAAAGGATTGCCCCCTGCCGATTGTCCCAGCAGTTCTTCAAGGATGCTCCCCCTTGTCCATAGGATCGATCCACAAATATTACCCCAAAATCGTCAAGCATCCGTCAACATCGATCGCAGTAACTTTATCAACACTGGGCTGTGGGTTTCGACGGTGGTGTTTATCGGAATTGCTATAAGTTTTGCAGCTATTTCGGCCAG TTTCTCCATCATTAACGTGCTC TTCAATCCGATCGAACCGGT GTTCAGCGTGTTTGGATTGTACATCT GGAATGGGGTGGCCCTTGGGTCCACTGCACTGTG ]
[+] EMBL AGA285438 [ CATGTGTTTCATTGATTGTGTTAATAGTCTCACTTTGTACACCGTATTGGATAACATCGGAGGCATATGAAAGCAACGCGTCCAGGAATAGTGAAATAAACTACGGGCTGTTTTCGGGTTCCTTAACTCAAAACTTTCTGCCCAATTCGCGGTACTACACTTTAACACTTACCTGCCTTTATCACGAATATGTGTGTGCATACAGTTGTCAAGAAGATGAAGAGTCACGAACCGAGGAAGTTTTGCAACTCTTAAAAGGATTGCCCCCTGCCGATTGTCCCAGCAGTTCTTCAAGGATGCTCCCCCTTGTCCATAGGATCGATCCACAAATATTACCCCAAAATCGTCAAGCATCCGTCAACATCGATTGCAGTAACT ]
[+] EMBL BX625679 [ AAGCAACGCGTCTGGGAATAGTGAAATAAACTACGGGCTGTTTTCGGGTTCCTTAATTCAAAACTTTCTGCCCAATTCGCGGTACTACACTTTAACACTTACCTGTCTTTATCACGAATATGTGTGTGCATACAGCTGTCAAGAAGATGAAGAGTCACGAACCGAGGAAGTTTTGCAACTCTTAAAAGGATTGCCCCCTGCCGATTGTCCCAGCAGTTCTTCAAGGATGCTTCCACTTGTCCATAGGATCGATCCACCAATATTCCCCCAAAATCGTCAAGCATCCGCCAACATCGATCGCAGTAACTTTATCAACACTGGGCTGTGGGTTTCGACGGTGGTGTTTATCGGAATTGCTATAAGTTTTGCAGCTATTTCGGCCAG TTTTTCCATCATTAACGTGCTC TTTAATCCGATCGAACCGGT GTTCAGCGTGTTTGGATTGTACATCT GGAATGGGGTGGCCCTTGGGTCCACTGCACTGTGCATGATAATGTGGGGAGCATTGTTTGCTAGTACTCTAGCCGATAACATCGCCATTACGGATACGCTTACAACACAGATTCCCTACAGCTCTGACGGGCTAGCTTCCCTAGGGGTATGCTATTGGATTTTACTTTTATCCATCTTGCTGCACGGCCTCAACGTAGGACTTCTGCTTTGGCGCAAACGTATCGTCAACAAAGAACCGCCGCCAACTACTATAGATGTCGATCGGTCTGATTTGACCATTATTATGTATTAAATAAATTGTGATCTACAT ]
[+] EMBL BX625744 [ TCGATCGCAGTAACTTTATCAACACTGGGCTGTGNGTTTCGACGGTGGTGTANATCGGAATTGCTA ]
[-] EMBL AGA284142 [ T GTTCAGCGTGTTTGGATTGTACATCT GGAATGGGGTGGCCCTTGGGTCCACTGCACTGTGCATGATAATGTGGGGAGCATTGTTTGCTAGTACTCTAACCGAAAACATCGCCATTACGGATACGCTTACAATACAGATTCCCTACAGCTCTGACGGGCTAGCTTCCCTAGGGGTATGCTATTGGATTTTACTGTTATCCATCTTGCTGCACGGCCTCAACGTAGGACTTTTGCTTTGGCGTAAACGTATCGTCAACAAAGAACCGCCGCCAACTACTATAGATGTCGATCGGTCTGATTTAACCATTATTATGTATTAAATAAATTGTGATCTACATTTTTTTTGAATATTATATGTCAGTAACAATTGCATCCCGATGCCTGCCACCATGACAATAAATATGAAACATTTTACTAGACAAAAAA]
consensusID : consensus_7678#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 869 fasta sequence
[GAATCCCCGCGGTTNGAAGTGATTAATTGCAAACGCGTTTATAAAAAGGTATCAATGTGTAAAGAGCTACGTGCTTAAGGAAATGGCTAAAACGAAATGGAATTTAATACTTATGCCACATTTATTTGTATACATAGTGTTTCATTTGATTGTGTTAATAGTCTACACTATTGTACACCGTATTTGGATAACATCGGAGGCATATGAAAGCAACGCGTCCAGGAATAGTGAAATAAACTACGGGCTGTATTTCGNGTTCCTTAACTCAAAACTTTCATGCCAATTCGCGGTACTACACTTTAACACTTACCTTGCCTTTATCACGAATATTGTGTGTGCATACAGTTGTNCAAGAAGATGAAGAGTCACGAACCGAGGAAGTNATANGCGAACTCTTAAACAGGATTGGCCCCTGGCCGAGTTGTCCCAGNCAGACTATCAAGGATGGATCCCCCATATGTACCATAGGATCGATCCAACAAATATCAACCCCAAACACTCCGTACAAGCATACCGTCCAACATCGATCGCCAGCAACCTTTATCAANAACTGGGCTGTGAGGTATCGACGCGCTGGCTGTAAATCNCGGAATNTGCTACTACAGTNNNAGCACGCTATAACGGACAGAACATCCAACCATNAACAGAGCCCTCCACACCCCGGAAACGCAAACCCGGCGNGTACNAACCAGCNGGAACCGGACAANGGCACATCCNNGGGCNCNAGAGGNGAGACCCANGGCAGTACCACCCGCACCTCGCCGCCTNATCNAACGCGNACGAGCCNTCCGCNCGGCCAGNACANACCAAACCCGNAAACCAACCCCCACAAANCGNCCACACCCCNCCCACACNCGNCNACCCCAACA]
[+] EMBL AL694982 [GAATCCCCGCGGTTNGAAGTGATTAATTGCAAACGCGTTTATAAAAAGGTATCAATGTGTAAAGAGCTACGTGCTTAAGGAAATGGCTAAAACGAAATGGAATTTAATACTTATGCCACATTTATTTGTATACATAGTGTTTCATTTGATTGTGTTAATAGTCTACACTATTGTACACCGTATTTGGATAACATCGGAGGCATATGAAAGCAACGCGTCCAGGAATAGTGAAATAAACTACGGGCTGTATTTCGNGTTCCTTAACTCAAAACTTTCATGCCAATTCGCGGTACTACACTTTAACACTTACCTTGCCTTTATCACGAATATTGTGTGTGCATACAGTTGTNCAAGAAGATGAAGAGTCACGAACCGAGGAAGTNATANGCGAACTCTTAAACAGGATTGGCCCCTGGCCGAGTTGTCCCAGNCAGACTATCAAGGATGGATCCCCCATATGTACCATAGGATCGATCCAACAAATATCAACCCCAAACACTCCGTACAAGCATACCGTCCAACATCGATCGCCAGCAACCTTTATCAANAACTGGGCTGTGAGGTATCGACGCGCTGGCTGTAAATCNCGGAATNTGCTACTACAGTNNNAGCACGCTATAACGGACAGAACATCCAACCATNAACAGAGCCCTCCACACCCCGGAAACGCAAACCCGGCGNGTACNAACCAGCNGGAACCGGACAANGGCACATCCNNGGGCNCNAGAGGNGAGACCCANGGCAGTACCACCCGCACCTCGCCGCCTNATCNAACGCGNACGAGCCNTCCGCNCGGCCAGNACANACCAAACCCGNAAACCAACCCCCACAAANCGNCCACACCCCNCCCACACNCGNCNACCCCAACA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7678#0 CCGGTGAAGTATCATCATCTTCACTAGAAACTATACACATTGAAGTGATTAAATTGCAAG 60
consensus_7678#1 --------------------------GAATCCCCGCGGTTNGAAGTGATTAA-TTGCAAA 33
*** * * * *********** ******
consensus_7678#0 CGGTTTATTAAAAAGGCATCAATGTGTAAAGAGCTACGTGCTTAAGCAA-TGGCTAAAAC 119
consensus_7678#1 CGCGTTTATAAAAAGGTATCAATGTGTAAAGAGCTACGTGCTTAAGGAAATGGCTAAAAC 93
** ** ******** ***************************** ** **********
consensus_7678#0 GAAATGGAATTTAATCTTT--GCCACATTTATT-GTAT-CAT-GTGTTTCATT-GATTGT 173
consensus_7678#1 GAAATGGAATTTAATACTTATGCCACATTTATTTGTATACATAGTGTTTCATTTGATTGT 153
*************** ** ************ **** *** ********** ******
consensus_7678#0 GTTAATAGTCT-CACT-TTGTACACCGTATT-GGATAACATCGGAGGCATATGAAAGCAA 230
consensus_7678#1 GTTAATAGTCTACACTATTGTACACCGTATTTGGATAACATCGGAGGCATATGAAAGCAA 213
*********** **** ************** ****************************
consensus_7678#0 CGCGTCTGGGAATAGTGAAATAAACTACGGGCTGT-TTTCGGGTTCCTTAATTCAAAACT 289
consensus_7678#1 CGCGTCCAGGAATAGTGAAATAAACTACGGGCTGTATTTCGNGTTCCTTAACTCAAAACT 273
****** *************************** ***** ********* ********
consensus_7678#0 TTCTGCCCAATTCGCGGTACTACACTTTAACACTTACCT-GTCTTTATCACGAATAT-GT 347
consensus_7678#1 TTCATGCCAATTCGCGGTACTACACTTTAACACTTACCTTGCCTTTATCACGAATATTGT 333
*** ********************************* * *************** **
consensus_7678#0 GTGTGCATACAGCTGTC-AAGAAGATGAAGAGTCACGAACCGAGGAAGTTTTGC---AAC 403
consensus_7678#1 GTGTGCATACAGTTGTNCAAGAAGATGAAGAGTCACGAACCGAGGAAGTNATANGCGAAC 393
************ *** ******************************* * ***
consensus_7678#0 TCTTAAA-AGGATTGCCCCCTG-CCGA-TTGTCCCAGC-AGTTCTTCAAGGATG---CTT 456
consensus_7678#1 TCTTAAACAGGATTGGCCCCTGGCCGAGTTGTCCCAGNCAGACTATCAAGGATGGATCCC 453
******* ******* ****** **** ********* ** ********* *
consensus_7678#0 CCACTTGT-CCATAGGATCGATCCACCAA-TATTCCCCCAAAAT----CGT-CAAGCAT- 508
consensus_7678#1 CCATATGTACCATAGGATCGATCCAACAAATATCAACCCCAAACACTCCGTACAAGCATA 513
*** *** **************** *** *** *** *** *** *******
consensus_7678#0 CCG-CCAACATCGATCGC-AGTAAC-TTTATCAACA-CTGGGCTGTG-GGTTTCGACG-- 561
consensus_7678#1 CCGTCCAACATCGATCGCCAGCAACCTTTATCAANAACTGGGCTGTGAGGTATCGACGCG 573
*** ************** ** *** ******** * ********** *** ******
consensus_7678#0 ---GTGGTGTTTATCGGAATT----GCTATAAGTTTTGCA-GCTATTTCGGCCAGTTTTT 613
consensus_7678#1 CTGGCTGTAAATCNCGGAATNTGCTACTACAGTNNNAGCACGCTATAACGGACAGAACAT 633
* ** * ****** *** * *** ***** *** *** *
consensus_7678#0 CCA-TCATTAAC-GTGCTCTTTAATCCGATCGAACCGGTGTTCAGCGTGTTTGGATTGTA 671
consensus_7678#1 CCAACCATNAACAGAGCCCTCCACACCCCGGAAACGCAAACCCGGCGNGTACNAAC---- 689
*** *** *** * ** ** * ** *** * *** ** *
consensus_7678#0 CATCTGGAATGGGGTGGCCCTTGGGTCCACTGCACTGTGCATGATAATGTGGGGAGCATT 731
consensus_7678#1 CAGCNGGAACCGGACAANGGCACATCCNNGGGCNCNAGAGGNGAGACCCANGGCAGTACC 749
** * **** ** * ** * ** * ** ** *
consensus_7678#0 GTTTGCTAGTACTCTAGCCGATAACATCGCCATTACGGATACGCTTACAACACAGATTCC 791
consensus_7678#1 ACCCGC-ACCTCGCCGCCTNAT-------CNAACGCGNACGAGCCNTCCGCNCGG--CCA 799
** * * * * ** * * ** * ** * * * * *
consensus_7678#0 CTACAGCTCTGACGGGCTAGCTTCCCTAGGGGTATGCTATTGGATTTTACTTTTATCCAT 851
consensus_7678#1 GNACANACCAAACCCGNAAACCAACCCCCACAAAN-CGNCCACACCCCNCCCACACNCGN 858
*** * ** * * * ** * * * * * *
consensus_7678#0 CTTGCTGCACGGCCTCAACGTAGGACTTCTGCTTTGGCGCAAACGTATCGTCAACAAAGA 911
consensus_7678#1 CNACCCCAACA------------------------------------------------- 869
* * **
consensus_7678#0 ACCGCCGCCAACTACTATAGATGTCGATCGGTCTGATTTGACCATTATTATGTATTAAAT 971
consensus_7678#1 ------------------------------------------------------------
consensus_7678#0 AAATTGTGATCTACATTTTTTTTGAATATTATATGTCAGTAACAATTGCATCCCGATGCC 1031
consensus_7678#1 ------------------------------------------------------------
consensus_7678#0 TGCCACCATGACAATAAATATGAAACATTTTACTAGACAAAAAA 1075
consensus_7678#1 --------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||