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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7688#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1228 fasta sequence
[CCGCGAAATGGATGGAAAGGGAAGGAGTGCGAGACAAAATCGAAGCGCGAATAGTAGGTGCCTGTTTTGTGTGCGCCAATTTTCCGGAACAACACGTGTGTGCGATGAAGCGTTGTTGCTTATTGTGCAACGCAGCAATAAGATATTCAGCGCCGCAGCATGGGAAATTGTGCACAAGACAAGGCAGCTCCATACGCAATCGATGGCTAGAACAAAATACGTGTAATGATTGTGGTCAAACACACAGACCAGCAGCAGTAGCATCATAATCGCATATATTTAATAGAACTGAAAACAAAAAAAATCCAGGCTTTCATTCCGCAATTTGAGTGATTTCTTGAGTGGAAGTGGAGTGGAGAGTGGAGAAAACAAAATGGATGATGATAATATGTAGGAAAAGGAGAGCAGACATAGTTTTGTGCAATAATATATTATATACTATATATACACACACACGTATATGTAGCTGAATGGGACTGAAAATGCCCCAGCGAGGGAGTTAGAGAGAGAGAGCG--AACGGTAGATTGCAAGATTACCAGATCGCAGATATCGTAAACATACACAGATACACAGATAAATAAACCACTCTCTCACA-TTAGCGTAAGAAGAGGGAGAACCGTTCCATTTGACCGTTGGAAACCTAGTCCGATATGGAGGAAATCCACAAACACAAATCCACACTGCATGTTGTTATGGTGCGCGCTCTGACAACCGATAGGCAAGAGGACCTCTCAACCATCCAGAAGAGGAATGCCAATGCCGAGGGAAAATTAGGGAAAATCCTTGCCCTGCGTGCTACACAAAAGCTCCCTCTAGAAAGGAAAACATGAAACCCTCTCGTTGGAAAGTGGGCACATTCCAGGAGGAACTAAAGCGCGAGCGCGTGTGTGTGTGTGTTGTCATGGCCGGAAAAGATCTGCCAAGACATTGTGCTTCATTGTATAGCGCACGCTGCAGACCTTGGGAATGTTGGAATGGAGAACAAAACCGTATTAATATCGCGTTTTTTCGATGTTTTACCAAAACAAACACAAGAGATTGTGTGCGCTCCACAATCCTCTCCTTCCGTGGGTTAGGAAGTGACAAGAGCCGCCGCCCCGTTAGTAGCGTTGTCGTACCTACCGTTACAAACACACACACACACAACACACATCAACAAGTAGAACGAAATTATAATCCACACGTGGCAGTAGAGCATTGAAGCTGCGTATTGATGTTTAGATTTGGG]
[+] EMBL BM638881 [CCGCGAAATGGATGGAAAGGGAAGGAGTGCGAGACAAAATCGAAGCGCGAATAGTAGGTGCCTGTTTTGTGTGCGCCAATTTTCCGGAACAACACGTGTGTGCGATGAAGCGTTGTTGCTTATTGTGCAACGCAGCAATAAGATATTCAGCGCCGCAGCATGGGAAATTGTGCACAAGACAAGGCAGCTCCATACGCAATCGATGGCTAGAACAAAATACGTGTAATGATTGTGGTCAAACACACAGACCAGCAGCAGTAGCATCATAATCGCATATATTTAATAGAACTGAAAACAAAAAAAATCCAGGCTTTCATTCCGCAATTTGAGTGATTTCTTGAGTGGAAGTGGAGTGGAGAGTGGAGAAAACAAAATGGATGATGATAATATGTAGGAAAAGGAGAGCAGACATAGTTTTGTGCAATAATATATTATATACTATATATACACACACACGTATATGTAGCTGAATGGGACTGAAAATGCCCCAGCGAGGGAGTTAGAGAGAGAGAGCG AACGGTAGATTGCAAGATTACCAGATCGCCGATATCGTAAACATACACAGATACACAGATAAACAAACCACTCTCTCACATTTAGCGTAAGAAGAGGGAGAACC ]
[+] EMBL AGA285530 [ ATAATATGTAGGAAAAGGAGAGCAGACATAGTTTTGTGCAATAATATATTATATACTATATATACACACACATGTATATGTAGCTAAATGGGACTGAAAATGCCCCAGCGAGGGAGATAGCGAGAGCGAACGGTAGTGGAAGATTGCAAGATTACCAGATCGCAGATATCGTAAACATACACAGATACACAGATAAATAAACCACTCTCTCACA TTAGCGTAAGAAGAGGGAGAACCGTTCCATTTGACCGTTGGAAACCTAGTCCGATATGGAGGAAATCCACAAACACAAATCCACACTGCATGTTGTTATGGTGCGCGCTCT ]
[+] EMBL BM589474 [ ccGATCGCAGATATCGTAAACATACACAGATACACAGATAAATAAACCACTCTCTCACA TTAGCGTAAGAAGAGGGAGAACCGTTCCATTTGACCGTTGGAAACCTAGTCCGATATGGAGGAAATCCACAAACACAAATCCACACTGCATGTTGTTATGGTGCGCGCTCTGACAACCGATAGGCAAGAGGACCTCTCAACCATCCAGAAGAGGAATGCCAATGCCGAGGGAAAATTAGGGAAAATCCTTGCCCTGCGTGCTACACAAAAGCTCCCTCTAGAAAGGAAAACATGAAACCCTCTCGTTGGAAAGTGGGCACATTCCAGGAGGAACTAAAGCGCGAGCGCGTGTGTGTGTGTGTTGTCATGGCCGGAAAAGATCTGCCAAGACATTGTGCTTCATTGTATAGCGCACGCTGCAGACCTTGGGAATGTTGGAATGGAGAACAAAACCGTATTAATATCGCGTTTTTTCGATGTTTTACCAAAACAAACACAAGAGATTGTGTGCGCTCCACAATCCTCTCCTTCCGTGGGTTAGGAAGTGACAAGAGCCGCCGCCCCGTTAGTAGCGTTGTCGTACCTACCGTTACAAACACACACACACACAACACACATCAACAAGTAGAACGAAATTATAATCCACACGTGGCAGTAGAGCATTGAAGCTGCGTATTGATGTTTAGATTTGGG]
consensusID : consensus_7688#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 880 fasta sequence
[TATATACACACACATGTATATGTAGCTAAATGGGACTGAAAATGCCCCAGCGAGGGAGATAGCGAGAGCGAACGGTAGTGGAAGATTGCAAGATTACCAGATCGCAGATATCGTAAACATACACAGATACACAGATAAATAAA-CCACTCTCTCACATTAGCGTAAGAAGAGGGAGAACCGTTCCATTTGACCGTTGGAAACCTAGTCCGATATGGAGGAAATCCACAAACACAAATCCACACTGCATGTTGTTATGGTGCGCGCTCTGACAACCGATAGGCAAGAGGACCTCTCAACCATCCAGAGG-AGGAATGCCAATGCCGAGGGAAAATTAGGGAAAATCCTTGCCCTGCGTGCTACACAAAAGCTCCCTCTAGAAAGGAAAACATGAAACCCTCTCGTTGGAAAGTGGGGGAATATTCCAGGAGGAACTAAAGCGCGCGCGTGTGTGTGTGTGTGTGTTGTCATGAGACCTTGGGGATGTTGGAATGGAGAAC-AAAACCCGTATTAATATCGCGTTTTTTCGATGTTTTACCAAAACAAACACAAGAGATTGTGTGCGCTCCACAATCCTCTCCCTTCCGTGGGTTAGGAAGTGACAAGAGCCGCCGCCCCG-TTAGTAGCGTTGTCGTACCTACCG--TTACAAA-CA-CACACA-CAACACACATCAACAAGTAGAACGAAATTATAATCCACACGTGGCAGTAGAGCATTGAAGCTGCGTATTGATGTTTAGATTTGGTTTATTTTATATATCAACGTGTTTAATAAAGCAATTGTATAAGGCGACCTGTGTATTGTAGAGGATAAAACAGAATAAAAAAAAAAACACACACACAGAGACACACAAGAGAAGATTGAATCCACGGGGAGCCCCCAGGAG]
[+] EMBL BX627308 [TATATACACACACATGTATATGTAGCTAAATGGGACTGAAAATGCCCCAGCGAGGGAGATAGCGAGAGCGAACGGTAGTGGAAGATTGCAAGATTACCAGATCGCAGATATCGTAAACATACACAGATACACAGATAAATAAA CCACTCTCTCACATTAGCGTAAGAAGAGGGAGAACCGTTCCATTTGACCGTTGGAAACCTAGTCCGATATGGAGGAAATCCACAAACACAAATCCACACTGCATGTTGTTATGGTGCGCGCTCTGACAACCGATAGGCAAGAGGACCTCTCAACCATCCAGAGG AGGAATGCCAATGCCGAGGGAAAATTAGGGAAAATCCTTGCCCTGCGTGCTACACAAAAGCTCCCTCTAGAAAGGAAAACATGAAACCCTCTCGTTGGAAAGTTGGGGAATATTCCAGGAGGAACTAAAGCGCGCGCGTGTGTGTGTGTGTGTGTTGTCATGAGACCTTGGGGATGTTGGA ]
[+] EMBL BX610594 [ TACCAGATCGCAGATATCGTAAACATACACAGATACACAGATAAATAAACCCACTCTCTCACATTAGCGTAAGAAGAGGGAGAACCGTTCCATTTGACCGTTGGAAACCTAGTCCGATATGGAGGAAATCCACAAACACAAATCCACACTGCATGTTGTTATGGTGCGCGCTCTGACAACCGATAGGCAAGAGGACCTCTCAACCATCCAGAGG AGGAATGCCAATGCCGAGGGAAAATTAGGGAAAATCCTTGCCCTGCGTGCTACACAAAAGCTCCCTCTAGAAATGAAAACATGAAACCCTCTCGTTGGAAAGTGGGGGAATATTCCAGGAGGAACTAAAGCGCGCGCGTGTGTGTGTGTGTGTGTTGTCATGAGACCTTGGGGATGTTGGAATGGAGAAC AAAACCCGTATTAATATCGCGTTTTTTCGATGTTTTACCAAAACAAACACAAGAGATTGTGTGCGCTCCACAATCCTCTCCCTTCCGTGGGTTAGGAAGTGACAAGAGCCGCCGCCCCG TTAGTAGCGTTGTCGTACCTACCG TTACAAA CA CACACA CAACACACATCAACAAGTAGAA ]
[+] EMBL BX619937 [ acgCCAGGCNGAGGTAGGAATGCC ATGCCGAGGGAAAATTAGGGAAAATCCTTGCCCTGCGTGCTACACAAAAGCTCCCTCTAGAAAGGAAAACATGAAACCCTCTCGTTGGAAAGTGGGGGAATATTCCAGGAGGAACTAAAGCGCGCGCGTGTGTGTGTGTGTGTGTTGTCATGAGACCTTGGGGATGTTGGAATGGAGAAC AAAACCCGTATTAATATCGCGTTTTTTCGATGTTTTACCAAAACAAACACAAGAGATTGTGTGCGCTCCACAATCCTCTCCCTTCCGTGGGTTAGGAAGTGACAAGAGCCGCCGCCCCGTTTAGTAGCGTTGTCGTNCCTACCGNTTTACAAACCACCACACACCAACACACATCAAC ]
[-] EMBL AGA284228 [ GTGTGTGTGTGTGTTGTCATGAGACCTTGGGGATGTTGGAATGGAGAACAAAAACCCGTATTAATATCGCGTTTTTTCGATGTTTTACCAAAACAAACACAAGAGATTGTGTGCGCTCCACAATCCTCTCCCTTCCGTGGGTTAGGAAGTGACAAGAGCCGCCGCCCCG TTAGTAGCGTTGTCGTACCTACCG TTACAAA CA CACACA CAACACACATCAACAAGTAGAACGAAATTATAATCCACACGTGGCAGTAGAGCATTGAAGCTGCGTATTGATGTTTAGATTTGGTTTATTTTATATATCAACGTGTTTAATAAAGCAATTGTATAAGGCGACCTGTGTATTGTAGAGGATAAAACAGAATAAAAA ]
[+] EMBL BX609892 [ TTTGGTTTATTTTATATATCAACGTTTTTAATAAAGCAATTGGATAAGGCGACCTGTGTATTGTAGAGGATAAAACAGAATAAGAAAAAAAACACACACACAGAGACACACAAGAGAAGATTGAATCCACGGGGAGCCCCCAGGAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7688#0 CCGCGAAATGGATGGAAAGGGAAGGAGTGCGAGACAAAATCGAAGCGCGAATAGTAGGTG 60
consensus_7688#1 ------------------------------------------------------------
consensus_7688#0 CCTGTTTTGTGTGCGCCAATTTTCCGGAACAACACGTGTGTGCGATGAAGCGTTGTTGCT 120
consensus_7688#1 ------------------------------------------------------------
consensus_7688#0 TATTGTGCAACGCAGCAATAAGATATTCAGCGCCGCAGCATGGGAAATTGTGCACAAGAC 180
consensus_7688#1 ------------------------------------------------------------
consensus_7688#0 AAGGCAGCTCCATACGCAATCGATGGCTAGAACAAAATACGTGTAATGATTGTGGTCAAA 240
consensus_7688#1 ------------------------------------------------------------
consensus_7688#0 CACACAGACCAGCAGCAGTAGCATCATAATCGCATATATTTAATAGAACTGAAAACAAAA 300
consensus_7688#1 ------------------------------------------------------------
consensus_7688#0 AAAATCCAGGCTTTCATTCCGCAATTTGAGTGATTTCTTGAGTGGAAGTGGAGTGGAGAG 360
consensus_7688#1 ------------------------------------------------------------
consensus_7688#0 TGGAGAAAACAAAATGGATGATGATAATATGTAGGAAAAGGAGAGCAGACATAGTTTTGT 420
consensus_7688#1 ------------------------------------------------------------
consensus_7688#0 GCAATAATATATTATATACTATATATACACACACACGTATATGTAGCTGAATGGGACTGA 480
consensus_7688#1 ---------------------TATATACACACACATGTATATGTAGCTAAATGGGACTGA 39
************** ************ ***********
consensus_7688#0 AAATGCCCCAGCGAGGGAGTTAGAGAGAGAGAGCG--AACGGTAGATTGCAAGATTACCA 538
consensus_7688#1 AAATGCCCCAGCGAGGGAGATAGCGAGAGCGAACGGTAGTGGAAGATTGCAAGATTACCA 99
******************* *** ***** ** ** * ** *****************
consensus_7688#0 GATCGCAGATATCGTAAACATACACAGATACACAGATAAATAAACCACTCTCTCACATTA 598
consensus_7688#1 GATCGCAGATATCGTAAACATACACAGATACACAGATAAATAAACCACTCTCTCACATTA 159
************************************************************
consensus_7688#0 GCGTAAGAAGAGGGAGAACCGTTCCATTTGACCGTTGGAAACCTAGTCCGATATGGAGGA 658
consensus_7688#1 GCGTAAGAAGAGGGAGAACCGTTCCATTTGACCGTTGGAAACCTAGTCCGATATGGAGGA 219
************************************************************
consensus_7688#0 AATCCACAAACACAAATCCACACTGCATGTTGTTATGGTGCGCGCTCTGACAACCGATAG 718
consensus_7688#1 AATCCACAAACACAAATCCACACTGCATGTTGTTATGGTGCGCGCTCTGACAACCGATAG 279
************************************************************
consensus_7688#0 GCAAGAGGACCTCTCAACCATCCAGAAGAGGAATGCCAATGCCGAGGGAAAATTAGGGAA 778
consensus_7688#1 GCAAGAGGACCTCTCAACCATCCAGAGGAGGAATGCCAATGCCGAGGGAAAATTAGGGAA 339
************************** *********************************
consensus_7688#0 AATCCTTGCCCTGCGTGCTACACAAAAGCTCCCTCTAGAAAGGAAAACATGAAACCCTCT 838
consensus_7688#1 AATCCTTGCCCTGCGTGCTACACAAAAGCTCCCTCTAGAAAGGAAAACATGAAACCCTCT 399
************************************************************
consensus_7688#0 CGTTGGAAAGTGGGC--ACATTCCAGGAGGAACTAAAGCGCGAGCGCGTGTGTGTGTGTG 896
consensus_7688#1 CGTTGGAAAGTGGGGGAATATTCCAGGAGGAACTAAAGCGCGCGCGTGTGTGTGTGTGTG 459
************** * *********************** *** *************
consensus_7688#0 TTGTCATGGCCGGAAAAGATCTGCCAAGACATTGTGCTTCATTGTATAGCGCACGCTGCA 956
consensus_7688#1 T---------------------------------------GTTGT------CATG----A 470
* **** ** * *
consensus_7688#0 GACCTTGGGAATGTTGGAATGGAGAACAAAACC-GTATTAATATCGCGTTTTTTCGATGT 1015
consensus_7688#1 GACCTTGGGGATGTTGGAATGGAGAACAAAACCCGTATTAATATCGCGTTTTTTCGATGT 530
********* *********************** **************************
consensus_7688#0 TTTACCAAAACAAACACAAGAGATTGTGTGCGCTCCACAATCCTCTCC-TTCCGTGGGTT 1074
consensus_7688#1 TTTACCAAAACAAACACAAGAGATTGTGTGCGCTCCACAATCCTCTCCCTTCCGTGGGTT 590
************************************************ ***********
consensus_7688#0 AGGAAGTGACAAGAGCCGCCGCCCCGTTAGTAGCGTTGTCGTACCTACCGTTACAAACAC 1134
consensus_7688#1 AGGAAGTGACAAGAGCCGCCGCCCCGTTAGTAGCGTTGTCGTACCTACCGTTACAAACAC 650
************************************************************
consensus_7688#0 ACACACACACAACACACATCAACAAGTAGAACGAAATTATAATCCACACGTGGCAGTAGA 1194
consensus_7688#1 ACACACA----ACACACATCAACAAGTAGAACGAAATTATAATCCACACGTGGCAGTAGA 706
******* *************************************************
consensus_7688#0 GCATTGAAGCTGCGTATTGATGTTTAGATTTGGG-------------------------- 1228
consensus_7688#1 GCATTGAAGCTGCGTATTGATGTTTAGATTTGGTTTATTTTATATATCAACGTGTTTAAT 766
*********************************
consensus_7688#0 ------------------------------------------------------------
consensus_7688#1 AAAGCAATTGTATAAGGCGACCTGTGTATTGTAGAGGATAAAACAGAATAAAAAAAAAAA 826
consensus_7688#0 ------------------------------------------------------
consensus_7688#1 CACACACACAGAGACACACAAGAGAAGATTGAATCCACGGGGAGCCCCCAGGAG 880
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||