These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_778#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 902 fasta sequence [CCGGCGAGGGAGGGGAGAGGGAGAGAGGACACGGAAGACAGCAGGAAAAAAAAAGAAGAGAAGGCGGCCAAAAGGACAGGCGACGAAAAAAAAAAACGAAAAGAAACAAAGGCCGGCCGCCCAGCAAAGGGGGAAACAAAAAAAAAGAAAAAAACCTAAACAAGACCACAACAGAGGGAAAACCAACAAGCGAAGCCGCCGGACGACAAGGAACCAACCGACAACAACAAAAACCAACACCAAAACCGACAAAAGGAACAACAAGGCAACAACAAAGAAAACGCAAAGGAAAGAACAAGCCAAACTGACAAGACACCAGGAGGAACAAAAGGAAAAGGCACCAGCGACAAAGACGCAACACCCGAAAACAAAGCCAAACAAGGAGACAGAGAAGGCCACAGACACGACCCAACAACAGGAGAAAAAAAAAAAGGAACAGAACGCAGCCGCAGGGAAACAGGCAGCAGCCAACGAAGAGGACACACAAGCGGAGGCAGAGACACACGCAGCCCACGAAACCGAGGCACAGCACAAAGACACGAAGGCAGCCGCAACAACAGCAACAAAAACACAAAAGCAACAAAGACCGCCGAGGCAACGACAAACACAAAGACAGAACCCGGGCAAAGGGAGGCAAAAGCCAGACAACAGGCGACCGACGAAAACAAAGAAACGCCAACGGCCGAACCAAAGAAACCAACGGAAACAGAGAACAAAAAACAGGCAAAGGCACCTAACAGAGAGAACAAGACCCAGACGGAGCAACCGACCAAAAACAAAAAGAAAAAAACACCAAAGGAACAAACGAACACCACAGGGGACGCAAAGCCCGTACCGGAAAAAACCGGGGCAACAAAGCCACCGGAGGCAAAAGCGGACCCCAAGGAAAAGACGGAAAAGAA] [+] EMBL CNS08F1J [CCGGCGAGGGAGGGGAGAGGGAGAGAGGACACGGAAGACAGCAGGAAAAAAAAAGAAGAGAAGGCGGCCAAAAGGACAGGCGACGAAAAAAAAAAACGAAAAGAAACAAAGGCCGGCCGCCCAGCAAAGGGGGAAACAAAAAAAAAGAAAAAAACCTAAACAAGACCACAACAGAGGGAAAACCAACAAGCGAAGCCGCCGGACGACAAGGAACCAACCGACAACAACAAAAACCAACACCAAAACCGACAAAAGGAACAACAAGGCAACAACAAAGAAAACGCAAAGGAAAGAACAAGCCAAACTGACAAGACACCAGGAGGAACAAAAGGAAAAGGCACCAGCGACAAAGACGCAACACCCGAAAACAAAGCCAAACAAGGAGACAGAGAAGGCCACAGACACGACCCAACAACAGGAGAAAAAAAAAAAGGAACAGAACGCAGCCGCAGGGAAACAGGCAGCAGCCAACGAAGAGGACACACAAGCGGAGGCAGAGACACACGCAGCCCACGAAACCGAGGCACAGCACAAAGACACGAAGGCAGCCGCAACAACAGCAACAAAAACACAAAAGCAACAAAGACCGCCGAGGCAACGACAAACACAAAGACAGAACCCGGGCAAAGGGAGGCAAAAGCCAGACAACAGGCGACCGACGAAAACAAAGAAACGCCAACGGCCGAACCAAAGAAACCAACGGAAACAGAGAACAAAAAACAGGCAAAGGCACCTAACAGAGAGAACAAGACCCAGACGGAGCAACCGACCAAAAACAAAAAGAAAAAAACACCAAAGGAACAAACGAACACCACAGGGGACGCAAAGCCCGTACCGGAAAAAACCGGGGCAACAAAGCCACCGGAGGCAAAAGCGGACCCCAAGGAAAAGACGGAAAAGAA] consensusID : consensus_778#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 91 fasta sequence [GAACAAGCCAAACAGACAAGACCCCCGGAGGAACAAAAGGAAAAGGCCCCAGCGACAAAGACGCCACACCCGAAAACAAAGCCCAACCAGG] [+] EMBL CNS09JJX [GAACAAGCCAAACAGACAAGACCCCCGGAGGAACAAAAGGAAAAGGCCCCAGCGACAAAGACGCCACACCCGAAAACAAAGCCCAACCAGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_778#0 CCGGCGAGGGAGGGGAGAGGGAGAGAGGACACGGAAGACAGCAGGAAAAAAAAAGAAGAG 60 consensus_778#1 ------------------------------------------------------------ consensus_778#0 AAGGCGGCCAAAAGGACAGGCGACGAAAAAAAAAAACGAAAAGAAACAAAGGCCGGCCGC 120 consensus_778#1 ------------------------------------------------------------ consensus_778#0 CCAGCAAAGGGGGAAACAAAAAAAAAGAAAAAAACCTAAACAAGACCACAACAGAGGGAA 180 consensus_778#1 ------------------------------------------------------------ consensus_778#0 AACCAACAAGCGAAGCCGCCGGACGACAAGGAACCAACCGACAACAACAAAAACCAACAC 240 consensus_778#1 ------------------------------------------------------------ consensus_778#0 CAAAACCGACAAAAGGAACAACAAGGCAACAACAAAGAAAACGCAAAGGAAAGAACAAGC 300 consensus_778#1 ----------------------------------------------------GAACAAGC 8 ******** consensus_778#0 CAAACTGACAAGACACCAGGAGGAACAAAAGGAAAAGGCACCAGCGACAAAGACGCAACA 360 consensus_778#1 CAAACAGACAAGACCCCCGGAGGAACAAAAGGAAAAGGCCCCAGCGACAAAGACGCCACA 68 ***** ******** ** ********************* **************** *** consensus_778#0 CCCGAAAACAAAGCCAAACAAGGAGACAGAGAAGGCCACAGACACGACCCAACAACAGGA 420 consensus_778#1 CCCGAAAACAAAGCCCAACCAGG------------------------------------- 91 *************** *** *** consensus_778#0 GAAAAAAAAAAAGGAACAGAACGCAGCCGCAGGGAAACAGGCAGCAGCCAACGAAGAGGA 480 consensus_778#1 ------------------------------------------------------------ consensus_778#0 CACACAAGCGGAGGCAGAGACACACGCAGCCCACGAAACCGAGGCACAGCACAAAGACAC 540 consensus_778#1 ------------------------------------------------------------ consensus_778#0 GAAGGCAGCCGCAACAACAGCAACAAAAACACAAAAGCAACAAAGACCGCCGAGGCAACG 600 consensus_778#1 ------------------------------------------------------------ consensus_778#0 ACAAACACAAAGACAGAACCCGGGCAAAGGGAGGCAAAAGCCAGACAACAGGCGACCGAC 660 consensus_778#1 ------------------------------------------------------------ consensus_778#0 GAAAACAAAGAAACGCCAACGGCCGAACCAAAGAAACCAACGGAAACAGAGAACAAAAAA 720 consensus_778#1 ------------------------------------------------------------ consensus_778#0 CAGGCAAAGGCACCTAACAGAGAGAACAAGACCCAGACGGAGCAACCGACCAAAAACAAA 780 consensus_778#1 ------------------------------------------------------------ consensus_778#0 AAGAAAAAAACACCAAAGGAACAAACGAACACCACAGGGGACGCAAAGCCCGTACCGGAA 840 consensus_778#1 ------------------------------------------------------------ consensus_778#0 AAAACCGGGGCAACAAAGCCACCGGAGGCAAAAGCGGACCCCAAGGAAAAGACGGAAAAG 900 consensus_778#1 ------------------------------------------------------------ consensus_778#0 AA 902 consensus_778#1 -- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||